Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rrp1P56183 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rrp1P56183 Srcap-214ENSMUST00000190390 9633 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Rrp1P56183 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Rrp1P56183 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Rrp1P56183 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rrp1P56183 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rrp1P56183 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rrp1P56183 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC8.47□□□□□ -1.05
Rrp1P56183 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Rrp1P56183 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rrp1P56183 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Rrp1P56183 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC8.47□□□□□ -1.05
Rrp1P56183 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Rrp1P56183 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC8.47□□□□□ -1.05
Rrp1P56183 Gm22271-201ENSMUST00000104035 128 ntBASIC8.47□□□□□ -1.05
Rrp1P56183 Gm4918-201ENSMUST00000119420 1084 ntBASIC8.47□□□□□ -1.05
Rrp1P56183 Gm11343-201ENSMUST00000120579 599 ntBASIC8.47□□□□□ -1.05
Rrp1P56183 Gm5931-201ENSMUST00000121308 477 ntBASIC8.47□□□□□ -1.05
Rrp1P56183 Gm13776-201ENSMUST00000122236 1261 ntBASIC8.47□□□□□ -1.05
Rrp1P56183 Gm24011-201ENSMUST00000157732 268 ntBASIC8.47□□□□□ -1.05
Rrp1P56183 Ifrd1-204ENSMUST00000165027 1293 ntTSL 5 BASIC8.47□□□□□ -1.05
Rrp1P56183 Olfr721-ps1-201ENSMUST00000165291 975 ntBASIC8.47□□□□□ -1.05
Rrp1P56183 Trav9d-2-201ENSMUST00000178824 337 ntAPPRIS ALT2 BASIC8.47□□□□□ -1.05
Rrp1P56183 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Rrp1P56183 Trav9n-2-201ENSMUST00000180097 337 ntAPPRIS ALT2 BASIC8.47□□□□□ -1.05
Rrp1P56183 Mir6239-201ENSMUST00000183564 105 ntBASIC8.47□□□□□ -1.05
Rrp1P56183 Gm18970-201ENSMUST00000186040 938 ntBASIC8.47□□□□□ -1.05
Rrp1P56183 9930111H07Rik-201ENSMUST00000187270 821 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Rrp1P56183 Gm37800-201ENSMUST00000192129 664 ntTSL 5 BASIC8.47□□□□□ -1.05
Rrp1P56183 Gm5541-201ENSMUST00000193248 1113 ntBASIC8.47□□□□□ -1.05
Rrp1P56183 Gm44471-201ENSMUST00000197963 100 ntBASIC8.47□□□□□ -1.05
Rrp1P56183 4633401B06Rik-201ENSMUST00000198169 1073 ntBASIC8.47□□□□□ -1.05
Rrp1P56183 Gm23604-202ENSMUST00000198428 137 ntBASIC8.47□□□□□ -1.05
Rrp1P56183 Mcee-204ENSMUST00000206882 391 ntTSL 2 BASIC8.47□□□□□ -1.05
Rrp1P56183 Gm18060-201ENSMUST00000207407 564 ntBASIC8.47□□□□□ -1.05
Rrp1P56183 Gm45283-201ENSMUST00000210593 628 ntBASIC8.47□□□□□ -1.05
Rrp1P56183 AC111092.1-201ENSMUST00000220181 411 ntTSL 3 BASIC8.47□□□□□ -1.05
Rrp1P56183 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Rrp1P56183 Il17f-201ENSMUST00000039046 1178 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rrp1P56183 Olfr466-201ENSMUST00000058907 927 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Rrp1P56183 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Rrp1P56183 Olfr225-202ENSMUST00000213169 2658 ntAPPRIS P5 TSL 5 BASIC8.47□□□□□ -1.05
Rrp1P56183 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Rrp1P56183 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC8.47□□□□□ -1.05
Rrp1P56183 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Rrp1P56183 Vmn2r-ps96-201ENSMUST00000221218 2545 ntBASIC8.47□□□□□ -1.05
Rrp1P56183 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC8.47□□□□□ -1.05
Rrp1P56183 4932414J04Rik-201ENSMUST00000152483 3059 ntTSL 2 BASIC8.47□□□□□ -1.05
Rrp1P56183 Gm37548-201ENSMUST00000194519 3814 ntBASIC8.47□□□□□ -1.05
Rrp1P56183 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC8.47□□□□□ -1.05
Rrp1P56183 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC8.47□□□□□ -1.05
Rrp1P56183 Stx8-202ENSMUST00000021286 1638 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Rrp1P56183 Fv1-201ENSMUST00000094481 1380 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Rrp1P56183 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rrp1P56183 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rrp1P56183 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Rrp1P56183 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Rrp1P56183 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Rrp1P56183 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Rrp1P56183 Gm10693-201ENSMUST00000144146 2037 ntBASIC8.46□□□□□ -1.05
Rrp1P56183 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Rrp1P56183 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rrp1P56183 Gm24334-201ENSMUST00000104210 128 ntBASIC8.46□□□□□ -1.06
Rrp1P56183 Ghrh-202ENSMUST00000109536 503 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rrp1P56183 Gm12072-201ENSMUST00000118293 715 ntBASIC8.46□□□□□ -1.06
Rrp1P56183 Gm23822-201ENSMUST00000158739 128 ntBASIC8.46□□□□□ -1.06
Rrp1P56183 Gm6465-201ENSMUST00000168154 1098 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Rrp1P56183 Gm9381-201ENSMUST00000182285 1012 ntBASIC8.46□□□□□ -1.06
Rrp1P56183 Gm8167-201ENSMUST00000183320 958 ntBASIC8.46□□□□□ -1.06
Rrp1P56183 Mark1-ps3-201ENSMUST00000184922 694 ntBASIC8.46□□□□□ -1.06
Rrp1P56183 Gm8307-201ENSMUST00000187682 1150 ntBASIC8.46□□□□□ -1.06
Rrp1P56183 1700016D06Rik-202ENSMUST00000190741 604 ntTSL 2 BASIC8.46□□□□□ -1.06
Rrp1P56183 Gm43023-201ENSMUST00000197583 2106 ntBASIC8.46□□□□□ -1.06
Rrp1P56183 Gm42424-201ENSMUST00000198319 376 ntBASIC8.46□□□□□ -1.06
Rrp1P56183 9530078K11Rik-201ENSMUST00000208883 694 ntBASIC8.46□□□□□ -1.06
Rrp1P56183 AC151904.2-201ENSMUST00000218683 1177 ntBASIC8.46□□□□□ -1.06
Rrp1P56183 Gm6993-201ENSMUST00000219110 210 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Rrp1P56183 AC167222.1-201ENSMUST00000219379 660 ntTSL 2 BASIC8.46□□□□□ -1.06
Rrp1P56183 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Rrp1P56183 Gm7762-201ENSMUST00000220595 604 ntTSL 3 BASIC8.46□□□□□ -1.06
Rrp1P56183 AL844586.1-201ENSMUST00000224297 1042 ntBASIC8.46□□□□□ -1.06
Rrp1P56183 AC124715.2-201ENSMUST00000226762 617 ntBASIC8.46□□□□□ -1.06
Rrp1P56183 AC116487.1-201ENSMUST00000227033 339 ntBASIC8.46□□□□□ -1.06
Rrp1P56183 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rrp1P56183 Olfr125-201ENSMUST00000050255 1118 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Rrp1P56183 Lyrm2-201ENSMUST00000062802 465 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rrp1P56183 6720489N17Rik-201ENSMUST00000091563 318 ntTSL 5 BASIC8.46□□□□□ -1.06
Rrp1P56183 Rpl27-ps3-201ENSMUST00000097682 475 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Rrp1P56183 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rrp1P56183 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Rrp1P56183 Gm13762-202ENSMUST00000168169 2180 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
Rrp1P56183 Gm43099-201ENSMUST00000198943 5241 ntBASIC8.46□□□□□ -1.06
Rrp1P56183 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Rrp1P56183 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Rrp1P56183 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rrp1P56183 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC8.46□□□□□ -1.06
Rrp1P56183 Gm37274-201ENSMUST00000192167 1682 ntBASIC8.46□□□□□ -1.06
Rrp1P56183 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rrp1P56183 C8a-202ENSMUST00000064873 3617 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms