Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC11.49□□□□□ -0.57
Cux1P53564 Gm37620-201ENSMUST00000192910 501 ntBASIC11.49□□□□□ -0.57
Cux1P53564 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC11.49□□□□□ -0.57
Cux1P53564 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Cux1P53564 Gm43926-201ENSMUST00000203978 430 ntBASIC11.49□□□□□ -0.57
Cux1P53564 Gm18690-201ENSMUST00000204488 985 ntBASIC11.49□□□□□ -0.57
Cux1P53564 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cux1P53564 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC11.49□□□□□ -0.57
Cux1P53564 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Cux1P53564 AC153847.1-201ENSMUST00000214524 353 ntBASIC11.49□□□□□ -0.57
Cux1P53564 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC11.49□□□□□ -0.57
Cux1P53564 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cux1P53564 Anapc1-203ENSMUST00000110333 4214 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cux1P53564 Bmpr1b-201ENSMUST00000029948 5349 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cux1P53564 Adgrf2-201ENSMUST00000113614 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cux1P53564 3110035E14Rik-201ENSMUST00000088666 3256 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cux1P53564 Rpgr-206ENSMUST00000115534 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cux1P53564 Gm16536-201ENSMUST00000162209 1589 ntBASIC11.49□□□□□ -0.57
Cux1P53564 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cux1P53564 Thbs1-201ENSMUST00000039559 5848 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cux1P53564 Add1-205ENSMUST00000114340 3761 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Cux1P53564 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cux1P53564 Gm44883-201ENSMUST00000206063 3258 ntBASIC11.48□□□□□ -0.57
Cux1P53564 Recql5-201ENSMUST00000021097 3971 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cux1P53564 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cux1P53564 Ifit1bl2-202ENSMUST00000112463 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cux1P53564 Uba7-201ENSMUST00000035216 3195 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cux1P53564 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cux1P53564 4932415M13Rik-202ENSMUST00000184645 3063 ntTSL 2 BASIC11.48□□□□□ -0.57
Cux1P53564 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cux1P53564 Zfp68-202ENSMUST00000085852 3318 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cux1P53564 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cux1P53564 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Cux1P53564 Tbc1d24-216ENSMUST00000202925 4216 ntTSL 5 BASIC11.48□□□□□ -0.57
Cux1P53564 Hmgxb4-201ENSMUST00000041759 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cux1P53564 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cux1P53564 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Cux1P53564 Gm14727-201ENSMUST00000118526 525 ntBASIC11.48□□□□□ -0.57
Cux1P53564 Gm5390-201ENSMUST00000119069 1230 ntBASIC11.48□□□□□ -0.57
Cux1P53564 Gm12944-201ENSMUST00000119262 463 ntBASIC11.48□□□□□ -0.57
Cux1P53564 Gm14721-201ENSMUST00000121381 525 ntBASIC11.48□□□□□ -0.57
Cux1P53564 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC11.48□□□□□ -0.57
Cux1P53564 Gm12504-202ENSMUST00000148026 306 ntBASIC11.48□□□□□ -0.57
Cux1P53564 Gm22795-201ENSMUST00000157233 118 ntBASIC11.48□□□□□ -0.57
Cux1P53564 Gm25556-201ENSMUST00000158077 144 ntBASIC11.48□□□□□ -0.57
Cux1P53564 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC11.48□□□□□ -0.57
Cux1P53564 Gm27186-201ENSMUST00000184223 307 ntBASIC11.48□□□□□ -0.57
Cux1P53564 Mir378d-201ENSMUST00000184232 110 ntBASIC11.48□□□□□ -0.57
Cux1P53564 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Cux1P53564 Gm8101-201ENSMUST00000192796 478 ntBASIC11.48□□□□□ -0.57
Cux1P53564 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC11.48□□□□□ -0.57
Cux1P53564 Gm2975-201ENSMUST00000209710 820 ntBASIC11.48□□□□□ -0.57
Cux1P53564 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC11.48□□□□□ -0.57
Cux1P53564 Gm4767-202ENSMUST00000188096 4725 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cux1P53564 Ank3-219ENSMUST00000182437 3113 ntTSL 5 BASIC11.48□□□□□ -0.57
Cux1P53564 Nod2-202ENSMUST00000109634 4666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cux1P53564 Helz-201ENSMUST00000075012 6218 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cux1P53564 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cux1P53564 Rtl3-201ENSMUST00000062010 2948 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cux1P53564 Rnf165-201ENSMUST00000026494 7300 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Cux1P53564 Stk11ip-202ENSMUST00000113553 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cux1P53564 Gm37200-201ENSMUST00000193689 2172 ntBASIC11.47□□□□□ -0.57
Cux1P53564 Zfp52-201ENSMUST00000079242 2175 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Cux1P53564 Gm37199-201ENSMUST00000193881 4065 ntBASIC11.47□□□□□ -0.57
Cux1P53564 Olfr1241-203ENSMUST00000215055 2441 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Cux1P53564 Tns1-208ENSMUST00000187584 9916 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Cux1P53564 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Cux1P53564 Rngtt-202ENSMUST00000108153 4157 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cux1P53564 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cux1P53564 Klf12-205ENSMUST00000228216 5890 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Cux1P53564 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Cux1P53564 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
Cux1P53564 Gm11257-201ENSMUST00000121313 315 ntBASIC11.47□□□□□ -0.57
Cux1P53564 Gm14847-201ENSMUST00000121978 519 ntBASIC11.47□□□□□ -0.57
Cux1P53564 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cux1P53564 Gm43905-201ENSMUST00000204516 204 ntBASIC11.47□□□□□ -0.57
Cux1P53564 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC11.47□□□□□ -0.57
Cux1P53564 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC11.47□□□□□ -0.57
Cux1P53564 Spag11b-202ENSMUST00000110767 1740 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cux1P53564 Kat6b-207ENSMUST00000182855 6791 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cux1P53564 Astn1-201ENSMUST00000046110 7195 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cux1P53564 Gm16487-201ENSMUST00000105048 4037 ntBASIC11.47□□□□□ -0.57
Cux1P53564 Birc6-202ENSMUST00000180037 15768 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cux1P53564 Fam102b-201ENSMUST00000046924 5368 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cux1P53564 Met-201ENSMUST00000080469 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cux1P53564 Gm18957-201ENSMUST00000197623 1813 ntBASIC11.47□□□□□ -0.57
Cux1P53564 Zfp275-201ENSMUST00000033731 6376 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cux1P53564 Slc37a2-202ENSMUST00000161114 2945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cux1P53564 AC138284.3-201ENSMUST00000217345 4663 ntBASIC11.46□□□□□ -0.57
Cux1P53564 Ttc28-206ENSMUST00000156290 10688 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Cux1P53564 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cux1P53564 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Cux1P53564 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Cux1P53564 Gm24519-201ENSMUST00000104507 132 ntBASIC11.46□□□□□ -0.57
Cux1P53564 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cux1P53564 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC11.46□□□□□ -0.57
Cux1P53564 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC11.46□□□□□ -0.57
Cux1P53564 Erich2os-201ENSMUST00000150702 608 ntTSL 5 BASIC11.46□□□□□ -0.57
Cux1P53564 Gm16026-205ENSMUST00000162923 641 ntBASIC11.46□□□□□ -0.57
Cux1P53564 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms