Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Ndp-201ENSMUST00000040134 1939 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Shmt1P50431 Dnmbp-203ENSMUST00000212048 4186 ntTSL 5 BASIC8.09□□□□□ -1.11
Shmt1P50431 Ikbkg-217ENSMUST00000164101 6788 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Shmt1P50431 Ikbkg-218ENSMUST00000180230 6785 ntAPPRIS P3 TSL 5 BASIC8.09□□□□□ -1.11
Shmt1P50431 Gm42462-201ENSMUST00000196543 1363 ntBASIC8.09□□□□□ -1.12
Shmt1P50431 Gm42546-201ENSMUST00000201584 2592 ntBASIC8.09□□□□□ -1.12
Shmt1P50431 Olfr743-202ENSMUST00000215793 2203 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.12
Shmt1P50431 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
Shmt1P50431 Gm10248-201ENSMUST00000090409 2731 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
Shmt1P50431 Sipa1l1-201ENSMUST00000053969 7488 ntAPPRIS P3 TSL 5 BASIC8.08□□□□□ -1.12
Shmt1P50431 Dis3l-202ENSMUST00000113890 3224 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Shmt1P50431 Tbx20-201ENSMUST00000052946 9091 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Shmt1P50431 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Shmt1P50431 Dnah9-201ENSMUST00000080665 13798 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Shmt1P50431 Afap1l2-201ENSMUST00000111584 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Shmt1P50431 Gm44117-201ENSMUST00000204442 1758 ntBASIC8.08□□□□□ -1.12
Shmt1P50431 Olfr1432-202ENSMUST00000207710 2068 ntAPPRIS P5 TSL 5 BASIC8.08□□□□□ -1.12
Shmt1P50431 Gm25725-201ENSMUST00000104528 130 ntBASIC8.08□□□□□ -1.12
Shmt1P50431 Gm23527-201ENSMUST00000104570 130 ntBASIC8.08□□□□□ -1.12
Shmt1P50431 Gm12959-201ENSMUST00000119396 403 ntBASIC8.08□□□□□ -1.12
Shmt1P50431 Gm14319-201ENSMUST00000142937 703 ntTSL 2 BASIC8.08□□□□□ -1.12
Shmt1P50431 AW495222-202ENSMUST00000149839 868 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Shmt1P50431 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC8.08□□□□□ -1.12
Shmt1P50431 Gm17047-201ENSMUST00000167709 430 ntBASIC8.08□□□□□ -1.12
Shmt1P50431 Gm23187-201ENSMUST00000175746 86 ntBASIC8.08□□□□□ -1.12
Shmt1P50431 Gm27458-201ENSMUST00000185108 121 ntBASIC8.08□□□□□ -1.12
Shmt1P50431 Gm3121-201ENSMUST00000187086 406 ntBASIC8.08□□□□□ -1.12
Shmt1P50431 1700020D05Rik-201ENSMUST00000189704 1021 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Shmt1P50431 Olfr318-201ENSMUST00000189911 1026 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Shmt1P50431 Gm37684-201ENSMUST00000192779 355 ntBASIC8.08□□□□□ -1.12
Shmt1P50431 Gm37724-201ENSMUST00000195240 1221 ntBASIC8.08□□□□□ -1.12
Shmt1P50431 Gm22711-202ENSMUST00000197029 135 ntBASIC8.08□□□□□ -1.12
Shmt1P50431 Gm42464-202ENSMUST00000198111 774 ntBASIC8.08□□□□□ -1.12
Shmt1P50431 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC8.08□□□□□ -1.12
Shmt1P50431 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Shmt1P50431 Gm44607-201ENSMUST00000205611 1090 ntBASIC8.08□□□□□ -1.12
Shmt1P50431 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC8.08□□□□□ -1.12
Shmt1P50431 CT025685.1-201ENSMUST00000213716 150 ntBASIC8.08□□□□□ -1.12
Shmt1P50431 AC163296.1-202ENSMUST00000218395 661 ntBASIC8.08□□□□□ -1.12
Shmt1P50431 AC144783.1-201ENSMUST00000219103 960 ntBASIC8.08□□□□□ -1.12
Shmt1P50431 AC163296.1-201ENSMUST00000220004 1266 ntBASIC8.08□□□□□ -1.12
Shmt1P50431 CT010480.3-201ENSMUST00000224712 259 ntBASIC8.08□□□□□ -1.12
Shmt1P50431 Atl3-201ENSMUST00000025668 6376 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Shmt1P50431 Olfr1322-201ENSMUST00000070304 933 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Shmt1P50431 Phc3-206ENSMUST00000129817 3019 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Shmt1P50431 Gm38380-201ENSMUST00000195718 2248 ntBASIC8.08□□□□□ -1.12
Shmt1P50431 Gm45360-201ENSMUST00000210698 1405 ntBASIC8.08□□□□□ -1.12
Shmt1P50431 Chm-201ENSMUST00000026607 4868 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Shmt1P50431 Gm11855-201ENSMUST00000121562 1869 ntBASIC8.08□□□□□ -1.12
Shmt1P50431 Slc12a1-201ENSMUST00000028630 4645 ntAPPRIS P5 TSL 1 (best) BASIC8.08□□□□□ -1.12
Shmt1P50431 AC138221.1-201ENSMUST00000216180 4944 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Shmt1P50431 Prrg1-202ENSMUST00000114025 3964 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Shmt1P50431 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC8.08□□□□□ -1.12
Shmt1P50431 Ceacam1-208ENSMUST00000206676 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Shmt1P50431 Tmem33-202ENSMUST00000160352 5322 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Shmt1P50431 Npr3-204ENSMUST00000228489 1969 ntBASIC8.08□□□□□ -1.12
Shmt1P50431 AC105958.1-201ENSMUST00000214783 2144 ntBASIC8.08□□□□□ -1.12
Shmt1P50431 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Shmt1P50431 Brd8-202ENSMUST00000097626 3005 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Shmt1P50431 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Shmt1P50431 Gtf3c2-210ENSMUST00000202639 4200 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Shmt1P50431 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Shmt1P50431 Zc4h2-201ENSMUST00000044382 2219 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Shmt1P50431 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC8.07□□□□□ -1.12
Shmt1P50431 Il15ra-214ENSMUST00000138349 1936 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Shmt1P50431 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Shmt1P50431 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Shmt1P50431 Mettl6-205ENSMUST00000227777 2762 ntAPPRIS ALT2 BASIC8.07□□□□□ -1.12
Shmt1P50431 Gm28649-201ENSMUST00000189153 1581 ntBASIC8.07□□□□□ -1.12
Shmt1P50431 Tmprss11e-201ENSMUST00000161306 3416 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Shmt1P50431 AI662270-202ENSMUST00000143673 1428 ntTSL 5 BASIC8.07□□□□□ -1.12
Shmt1P50431 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
Shmt1P50431 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
Shmt1P50431 Gm17184-201ENSMUST00000111864 462 ntBASIC8.07□□□□□ -1.12
Shmt1P50431 Gm11416-201ENSMUST00000119111 863 ntBASIC8.07□□□□□ -1.12
Shmt1P50431 Gm14465-201ENSMUST00000120603 567 ntBASIC8.07□□□□□ -1.12
Shmt1P50431 Gm14826-201ENSMUST00000121284 901 ntBASIC8.07□□□□□ -1.12
Shmt1P50431 Gm22000-201ENSMUST00000153087 730 ntTSL 5 BASIC8.07□□□□□ -1.12
Shmt1P50431 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Shmt1P50431 Clec2i-205ENSMUST00000162666 1091 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Shmt1P50431 Gm15734-201ENSMUST00000163076 1040 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Shmt1P50431 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Shmt1P50431 Gm20797-201ENSMUST00000177894 383 ntBASIC8.07□□□□□ -1.12
Shmt1P50431 Gm26959-201ENSMUST00000182376 978 ntBASIC8.07□□□□□ -1.12
Shmt1P50431 Gm9423-201ENSMUST00000183173 997 ntBASIC8.07□□□□□ -1.12
Shmt1P50431 Gm28894-201ENSMUST00000185214 615 ntBASIC8.07□□□□□ -1.12
Shmt1P50431 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Shmt1P50431 Gm37857-201ENSMUST00000191784 1199 ntBASIC8.07□□□□□ -1.12
Shmt1P50431 Gm37369-201ENSMUST00000194179 615 ntBASIC8.07□□□□□ -1.12
Shmt1P50431 Gm45071-201ENSMUST00000205353 571 ntBASIC8.07□□□□□ -1.12
Shmt1P50431 Gm44979-201ENSMUST00000206218 287 ntBASIC8.07□□□□□ -1.12
Shmt1P50431 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC8.07□□□□□ -1.12
Shmt1P50431 Gm8804-201ENSMUST00000212292 798 ntBASIC8.07□□□□□ -1.12
Shmt1P50431 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC8.07□□□□□ -1.12
Shmt1P50431 Gm40552-201ENSMUST00000218233 1258 ntTSL 5 BASIC8.07□□□□□ -1.12
Shmt1P50431 Gm33782-201ENSMUST00000218518 517 ntTSL 3 BASIC8.07□□□□□ -1.12
Shmt1P50431 AC167222.1-201ENSMUST00000219379 660 ntTSL 2 BASIC8.07□□□□□ -1.12
Shmt1P50431 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
Shmt1P50431 Gng2-201ENSMUST00000055100 572 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
Shmt1P50431 Glmp-209ENSMUST00000177005 4219 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 115 ms