Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Arpp21-203ENSMUST00000111872 3316 ntTSL 5 BASIC7.7□□□□□ -1.18
HttP42859 Arpp21-229ENSMUST00000164754 3310 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
HttP42859 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
HttP42859 Zfp52-201ENSMUST00000079242 2175 ntAPPRIS P1 TSL 3 BASIC7.7□□□□□ -1.18
HttP42859 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
HttP42859 Txndc16-205ENSMUST00000139526 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
HttP42859 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
HttP42859 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
HttP42859 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC7.7□□□□□ -1.18
HttP42859 Stam-201ENSMUST00000028050 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
HttP42859 Trav8-2-201ENSMUST00000130122 337 ntBASIC7.69□□□□□ -1.18
HttP42859 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC7.69□□□□□ -1.18
HttP42859 Mir6361-201ENSMUST00000185079 101 ntBASIC7.69□□□□□ -1.18
HttP42859 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC7.69□□□□□ -1.18
HttP42859 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
HttP42859 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
HttP42859 Hmgcs1-202ENSMUST00000224188 3464 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
HttP42859 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
HttP42859 Inpp5d-209ENSMUST00000168783 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
HttP42859 Cdc6-202ENSMUST00000093937 2559 ntAPPRIS P4 TSL 1 (best) BASIC7.69□□□□□ -1.18
HttP42859 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
HttP42859 Trim40-201ENSMUST00000087158 2117 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
HttP42859 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC7.69□□□□□ -1.18
HttP42859 Gm14070-201ENSMUST00000120773 428 ntBASIC7.69□□□□□ -1.18
HttP42859 Gm6451-201ENSMUST00000121488 717 ntBASIC7.69□□□□□ -1.18
HttP42859 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC7.69□□□□□ -1.18
HttP42859 Gm25904-201ENSMUST00000158491 143 ntBASIC7.69□□□□□ -1.18
HttP42859 Gm8924-201ENSMUST00000197405 1132 ntBASIC7.69□□□□□ -1.18
HttP42859 Gm21040-201ENSMUST00000199493 1132 ntBASIC7.69□□□□□ -1.18
HttP42859 AC124778.1-201ENSMUST00000216013 162 ntBASIC7.69□□□□□ -1.18
HttP42859 AC122251.1-201ENSMUST00000227717 639 ntBASIC7.69□□□□□ -1.18
HttP42859 Gm14244-201ENSMUST00000155688 2410 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
HttP42859 AC165148.1-201ENSMUST00000224795 2372 ntBASIC7.69□□□□□ -1.18
HttP42859 Gfpt2-201ENSMUST00000020629 2947 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
HttP42859 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC7.69□□□□□ -1.18
HttP42859 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
HttP42859 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
HttP42859 Nup188-201ENSMUST00000064447 5710 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
HttP42859 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
HttP42859 Gm32552-201ENSMUST00000217849 2291 ntTSL 5 BASIC7.69□□□□□ -1.18
HttP42859 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
HttP42859 Pla2g16-201ENSMUST00000025925 3523 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
HttP42859 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
HttP42859 Gm11976-201ENSMUST00000119236 295 ntBASIC7.69□□□□□ -1.18
HttP42859 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC7.69□□□□□ -1.18
HttP42859 Gm25435-201ENSMUST00000158277 267 ntBASIC7.69□□□□□ -1.18
HttP42859 Gm22990-201ENSMUST00000175427 89 ntBASIC7.69□□□□□ -1.18
HttP42859 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC7.69□□□□□ -1.18
HttP42859 Gm29234-201ENSMUST00000187452 1262 ntBASIC7.69□□□□□ -1.18
HttP42859 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC7.69□□□□□ -1.18
HttP42859 Igkv3-8-201ENSMUST00000197635 339 ntBASIC7.69□□□□□ -1.18
HttP42859 Gm42723-201ENSMUST00000199966 1044 ntBASIC7.69□□□□□ -1.18
HttP42859 Olfr32-206ENSMUST00000215765 1241 ntAPPRIS P1 TSL 3 BASIC7.69□□□□□ -1.18
HttP42859 AC123920.1-201ENSMUST00000221449 384 ntBASIC7.69□□□□□ -1.18
HttP42859 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
HttP42859 Olfr32-201ENSMUST00000099755 1016 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
HttP42859 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC7.69□□□□□ -1.18
HttP42859 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC7.69□□□□□ -1.18
HttP42859 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
HttP42859 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC7.69□□□□□ -1.18
HttP42859 AU015836-202ENSMUST00000121565 2997 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
HttP42859 Gm38169-201ENSMUST00000191822 2539 ntBASIC7.68□□□□□ -1.18
HttP42859 AC107740.1-201ENSMUST00000216972 2401 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
HttP42859 Commd8-201ENSMUST00000013693 3895 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
HttP42859 Gm12643-201ENSMUST00000116078 374 ntBASIC7.68□□□□□ -1.18
HttP42859 Gm15216-201ENSMUST00000118058 277 ntBASIC7.68□□□□□ -1.18
HttP42859 Gm14457-201ENSMUST00000148069 1161 ntBASIC7.68□□□□□ -1.18
HttP42859 Gm6918-201ENSMUST00000167622 1222 ntBASIC7.68□□□□□ -1.18
HttP42859 Gm20432-201ENSMUST00000173716 250 ntBASIC7.68□□□□□ -1.18
HttP42859 Gm27601-201ENSMUST00000184794 127 ntBASIC7.68□□□□□ -1.18
HttP42859 Gm43555-201ENSMUST00000196588 310 ntBASIC7.68□□□□□ -1.18
HttP42859 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
HttP42859 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
HttP42859 Prcp-202ENSMUST00000207594 2245 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
HttP42859 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
HttP42859 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC7.68□□□□□ -1.18
HttP42859 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
HttP42859 Tcam1-201ENSMUST00000044462 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
HttP42859 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
HttP42859 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
HttP42859 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
HttP42859 6330549D23Rik-203ENSMUST00000160818 3228 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
HttP42859 AC159301.1-202ENSMUST00000225860 2133 ntBASIC7.68□□□□□ -1.18
HttP42859 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
HttP42859 Snora35-201ENSMUST00000104579 128 ntBASIC7.68□□□□□ -1.18
HttP42859 Gm5456-201ENSMUST00000170706 844 ntBASIC7.68□□□□□ -1.18
HttP42859 Gm4373-201ENSMUST00000178571 556 ntBASIC7.68□□□□□ -1.18
HttP42859 Gm17045-201ENSMUST00000178600 844 ntBASIC7.68□□□□□ -1.18
HttP42859 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
HttP42859 Gm37285-201ENSMUST00000194465 1139 ntBASIC7.68□□□□□ -1.18
HttP42859 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC7.68□□□□□ -1.18
HttP42859 AC140409.4-201ENSMUST00000215757 538 ntBASIC7.68□□□□□ -1.18
HttP42859 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC7.68□□□□□ -1.18
HttP42859 AC187103.4-201ENSMUST00000225399 300 ntBASIC7.68□□□□□ -1.18
HttP42859 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
HttP42859 Cldn18-201ENSMUST00000035048 4172 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
HttP42859 Olfr523-203ENSMUST00000213953 3445 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
HttP42859 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
HttP42859 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
HttP42859 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC7.68□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms