Protein–RNA interactions for Protein: P33215

Nedd1, Protein NEDD1, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd1P33215 Cav1-202ENSMUST00000115453 2746 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Nedd1P33215 Gm2163-201ENSMUST00000179734 2723 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Nedd1P33215 Zkscan1-203ENSMUST00000110962 4843 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Nedd1P33215 Zfp90-205ENSMUST00000212874 2195 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nedd1P33215 Ap3m2-204ENSMUST00000210656 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nedd1P33215 Tnni3k-201ENSMUST00000064076 3034 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nedd1P33215 Zic4-201ENSMUST00000066384 3891 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Nedd1P33215 Myo15-201ENSMUST00000071880 11769 ntAPPRIS P4 TSL 5 BASIC9.03□□□□□ -0.96
Nedd1P33215 C78859-201ENSMUST00000212800 5943 ntBASIC9.03□□□□□ -0.96
Nedd1P33215 F630040K05Rik-201ENSMUST00000180519 2841 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Nedd1P33215 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Nedd1P33215 Npffr2-201ENSMUST00000048557 1643 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nedd1P33215 Eif4a2-202ENSMUST00000077605 2708 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Nedd1P33215 Fto-201ENSMUST00000069718 3564 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nedd1P33215 Tmsb4x-203ENSMUST00000112176 698 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Nedd1P33215 Gm23987-201ENSMUST00000117039 129 ntBASIC9.03□□□□□ -0.96
Nedd1P33215 Gm8858-201ENSMUST00000118259 342 ntBASIC9.03□□□□□ -0.96
Nedd1P33215 Gm12387-201ENSMUST00000118573 955 ntBASIC9.03□□□□□ -0.96
Nedd1P33215 Gm14837-201ENSMUST00000119688 206 ntBASIC9.03□□□□□ -0.96
Nedd1P33215 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Nedd1P33215 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Nedd1P33215 Gm17655-201ENSMUST00000167969 255 ntBASIC9.03□□□□□ -0.96
Nedd1P33215 Gm6536-201ENSMUST00000171180 615 ntBASIC9.03□□□□□ -0.96
Nedd1P33215 D330041H03Rik-203ENSMUST00000180579 605 ntTSL 5 BASIC9.03□□□□□ -0.96
Nedd1P33215 Gm27033-201ENSMUST00000183226 544 ntBASIC9.03□□□□□ -0.96
Nedd1P33215 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC9.03□□□□□ -0.96
Nedd1P33215 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC9.03□□□□□ -0.96
Nedd1P33215 1700066B17Rik-202ENSMUST00000187091 675 ntTSL 3 BASIC9.03□□□□□ -0.96
Nedd1P33215 Gm28546-201ENSMUST00000188221 615 ntBASIC9.03□□□□□ -0.96
Nedd1P33215 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC9.03□□□□□ -0.96
Nedd1P33215 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC9.03□□□□□ -0.96
Nedd1P33215 Cnn3-203ENSMUST00000197135 1242 ntTSL 5 BASIC9.03□□□□□ -0.96
Nedd1P33215 Gm43008-201ENSMUST00000202346 286 ntBASIC9.03□□□□□ -0.96
Nedd1P33215 Klk1b2-ps-201ENSMUST00000206099 786 ntBASIC9.03□□□□□ -0.96
Nedd1P33215 Gm33103-201ENSMUST00000212717 527 ntTSL 3 BASIC9.03□□□□□ -0.96
Nedd1P33215 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Nedd1P33215 Gm19186-201ENSMUST00000219922 333 ntBASIC9.03□□□□□ -0.96
Nedd1P33215 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Nedd1P33215 AC117656.3-205ENSMUST00000224606 1205 ntBASIC9.03□□□□□ -0.96
Nedd1P33215 AC140208.1-201ENSMUST00000226609 285 ntBASIC9.03□□□□□ -0.96
Nedd1P33215 AC116596.2-203ENSMUST00000227345 731 ntBASIC9.03□□□□□ -0.96
Nedd1P33215 AC124103.1-201ENSMUST00000227564 1027 ntBASIC9.03□□□□□ -0.96
Nedd1P33215 4930563M21Rik-201ENSMUST00000060468 792 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nedd1P33215 Olfr120-201ENSMUST00000077498 993 ntBASIC9.03□□□□□ -0.96
Nedd1P33215 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nedd1P33215 Gm7493-201ENSMUST00000085919 626 ntBASIC9.03□□□□□ -0.96
Nedd1P33215 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC9.03□□□□□ -0.96
Nedd1P33215 Gm43917-201ENSMUST00000191984 2360 ntBASIC9.03□□□□□ -0.96
Nedd1P33215 Fam90a1b-203ENSMUST00000113903 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nedd1P33215 Rbm12-201ENSMUST00000059647 6667 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nedd1P33215 Med1-203ENSMUST00000107545 8024 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nedd1P33215 Ank3-203ENSMUST00000092431 5823 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Nedd1P33215 Fto-203ENSMUST00000128081 4707 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Nedd1P33215 Gm44417-201ENSMUST00000203298 3359 ntBASIC9.03□□□□□ -0.96
Nedd1P33215 Kalrn-204ENSMUST00000114949 3618 ntTSL 5 BASIC9.03□□□□□ -0.96
Nedd1P33215 Prpf40a-208ENSMUST00000210789 3773 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Nedd1P33215 Dclk1-207ENSMUST00000198412 4282 ntTSL 5 BASIC9.03□□□□□ -0.96
Nedd1P33215 Ces3a-202ENSMUST00000093223 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nedd1P33215 Chid1-203ENSMUST00000118694 3910 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Nedd1P33215 Map3k20-204ENSMUST00000135469 6663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nedd1P33215 Mbtps1-202ENSMUST00000098362 4336 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nedd1P33215 Arpp21-203ENSMUST00000111872 3316 ntTSL 5 BASIC9.03□□□□□ -0.96
Nedd1P33215 Arpp21-229ENSMUST00000164754 3310 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nedd1P33215 Nutm1-201ENSMUST00000043970 3731 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nedd1P33215 Pecam1-201ENSMUST00000068021 2977 ntAPPRIS ALT2 TSL 2 BASIC9.03□□□□□ -0.96
Nedd1P33215 Gm5493-201ENSMUST00000182063 1952 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nedd1P33215 Gm45903-201ENSMUST00000212891 2898 ntTSL 5 BASIC9.02□□□□□ -0.96
Nedd1P33215 Cdh13-201ENSMUST00000117160 3785 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Nedd1P33215 Gm44436-201ENSMUST00000204200 1494 ntBASIC9.02□□□□□ -0.96
Nedd1P33215 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.96
Nedd1P33215 Kcnma1-203ENSMUST00000100831 3261 ntTSL 5 BASIC9.02□□□□□ -0.96
Nedd1P33215 Gm30400-202ENSMUST00000210562 2115 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Nedd1P33215 Ndst2-205ENSMUST00000225000 3661 ntAPPRIS P1 BASIC9.02□□□□□ -0.96
Nedd1P33215 Zfp827-202ENSMUST00000098614 7581 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.96
Nedd1P33215 Plec-208ENSMUST00000080857 14959 ntTSL 5 BASIC9.02□□□□□ -0.96
Nedd1P33215 Plec-209ENSMUST00000089610 14972 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.96
Nedd1P33215 Anapc1-203ENSMUST00000110333 4214 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Nedd1P33215 Celf2-223ENSMUST00000182851 3587 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Nedd1P33215 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.96
Nedd1P33215 Alpk1-201ENSMUST00000029662 4795 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Nedd1P33215 Gm28791-201ENSMUST00000185888 1779 ntBASIC9.02□□□□□ -0.97
Nedd1P33215 Gm37968-201ENSMUST00000195131 3201 ntBASIC9.02□□□□□ -0.97
Nedd1P33215 Slmapos2-201ENSMUST00000160089 2194 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Nedd1P33215 Zfp551-201ENSMUST00000080348 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nedd1P33215 Proz-201ENSMUST00000033822 3361 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nedd1P33215 Sh3bgrl2-201ENSMUST00000113215 4565 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nedd1P33215 Sulf1-205ENSMUST00000186051 4563 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Nedd1P33215 Lipc-201ENSMUST00000034731 1920 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nedd1P33215 Vmn2r-ps99-202ENSMUST00000223517 2338 ntBASIC9.02□□□□□ -0.97
Nedd1P33215 Rpgr-205ENSMUST00000115533 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nedd1P33215 Gulp1-201ENSMUST00000074525 3138 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nedd1P33215 Tgs1-201ENSMUST00000052712 4327 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nedd1P33215 Gm25273-201ENSMUST00000104295 115 ntBASIC9.02□□□□□ -0.97
Nedd1P33215 Smim23-202ENSMUST00000109365 331 ntTSL 5 BASIC9.02□□□□□ -0.97
Nedd1P33215 Rpl35a-202ENSMUST00000115075 518 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nedd1P33215 Gm15578-201ENSMUST00000117320 475 ntBASIC9.02□□□□□ -0.97
Nedd1P33215 Vps29-202ENSMUST00000117868 720 ntTSL 2 BASIC9.02□□□□□ -0.97
Nedd1P33215 Gm7831-201ENSMUST00000117990 552 ntBASIC9.02□□□□□ -0.97
Nedd1P33215 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Nedd1P33215 Rpl36-ps2-201ENSMUST00000136893 311 ntBASIC9.02□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 160.4 ms