Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Anapc15-ps-201ENSMUST00000099328 426 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
P20040 Gm45221-201ENSMUST00000207822 2272 ntBASIC6.72□□□□□ -1.33
P20040 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
P20040 Malat1-201ENSMUST00000172812 6983 ntBASIC6.72□□□□□ -1.33
P20040 Nprl2-201ENSMUST00000010201 1441 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
P20040 Zp4-ps-201ENSMUST00000220980 1561 ntBASIC6.72□□□□□ -1.33
P20040 Cav1-202ENSMUST00000115453 2746 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
P20040 Gm38697-201ENSMUST00000198061 1746 ntBASIC6.72□□□□□ -1.33
P20040 Gm37510-201ENSMUST00000194151 4762 ntBASIC6.72□□□□□ -1.33
P20040 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
P20040 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
P20040 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
P20040 Etnppl-202ENSMUST00000163620 1482 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
P20040 Gm45251-201ENSMUST00000209486 1465 ntBASIC6.72□□□□□ -1.33
P20040 Fam90a1b-203ENSMUST00000113903 1760 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
P20040 Gm44550-201ENSMUST00000207311 2058 ntBASIC6.72□□□□□ -1.33
P20040 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
P20040 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
P20040 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
P20040 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
P20040 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
P20040 Vmn2r52-201ENSMUST00000164918 2559 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
P20040 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
P20040 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC6.71□□□□□ -1.33
P20040 Gm13571-201ENSMUST00000124654 1381 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
P20040 4933406K04Rik-203ENSMUST00000135423 1391 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
P20040 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC6.71□□□□□ -1.33
P20040 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
P20040 Tpo-201ENSMUST00000021005 3299 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
P20040 Ston1-201ENSMUST00000064035 3287 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
P20040 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC6.71□□□□□ -1.34
P20040 Gm33035-201ENSMUST00000219854 1718 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
P20040 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
P20040 Gm12919-201ENSMUST00000119855 1594 ntBASIC6.71□□□□□ -1.34
P20040 Dnajb5-202ENSMUST00000084662 3302 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
P20040 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
P20040 Pglyrp4-203ENSMUST00000169698 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
P20040 Gm26014-201ENSMUST00000104405 132 ntBASIC6.71□□□□□ -1.34
P20040 Ap5s1-202ENSMUST00000110206 703 ntTSL 3 BASIC6.71□□□□□ -1.34
P20040 Gm11907-201ENSMUST00000118918 1007 ntBASIC6.71□□□□□ -1.34
P20040 Gm12611-201ENSMUST00000119452 1037 ntBASIC6.71□□□□□ -1.34
P20040 Gm6292-201ENSMUST00000120712 1095 ntBASIC6.71□□□□□ -1.34
P20040 Gm14156-201ENSMUST00000121538 483 ntBASIC6.71□□□□□ -1.34
P20040 BC002163-201ENSMUST00000121906 319 ntBASIC6.71□□□□□ -1.34
P20040 Pogk-201ENSMUST00000127596 769 ntTSL 3 BASIC6.71□□□□□ -1.34
P20040 Gm16174-201ENSMUST00000137373 402 ntTSL 2 BASIC6.71□□□□□ -1.34
P20040 Gm11632-201ENSMUST00000145489 674 ntTSL 3 BASIC6.71□□□□□ -1.34
P20040 Gm16034-201ENSMUST00000156446 480 ntTSL 2 BASIC6.71□□□□□ -1.34
P20040 Gm7162-201ENSMUST00000161205 1024 ntBASIC6.71□□□□□ -1.34
P20040 Gm25947-201ENSMUST00000180343 110 ntBASIC6.71□□□□□ -1.34
P20040 1700066B17Rik-202ENSMUST00000187091 675 ntTSL 3 BASIC6.71□□□□□ -1.34
P20040 Gm17867-201ENSMUST00000188981 391 ntBASIC6.71□□□□□ -1.34
P20040 Gm28864-201ENSMUST00000189251 644 ntBASIC6.71□□□□□ -1.34
P20040 Gm29348-201ENSMUST00000189555 779 ntTSL 3 BASIC6.71□□□□□ -1.34
P20040 Ly6c2-204ENSMUST00000191451 538 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
P20040 Gm43479-201ENSMUST00000200801 529 ntTSL 2 BASIC6.71□□□□□ -1.34
P20040 Gm34701-201ENSMUST00000204213 849 ntBASIC6.71□□□□□ -1.34
P20040 Olfr320-201ENSMUST00000204718 928 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
P20040 AC125543.2-201ENSMUST00000222114 105 ntBASIC6.71□□□□□ -1.34
P20040 Gm18629-201ENSMUST00000222496 884 ntBASIC6.71□□□□□ -1.34
P20040 CT030170.7-201ENSMUST00000223372 103 ntBASIC6.71□□□□□ -1.34
P20040 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
P20040 AC124196.1-201ENSMUST00000225970 1032 ntBASIC6.71□□□□□ -1.34
P20040 AC137950.1-201ENSMUST00000228553 515 ntBASIC6.71□□□□□ -1.34
P20040 Cd74-201ENSMUST00000050487 1218 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
P20040 4930563M21Rik-201ENSMUST00000060468 792 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
P20040 Trex1-201ENSMUST00000061973 1084 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
P20040 Gm25259-201ENSMUST00000083048 193 ntBASIC6.71□□□□□ -1.34
P20040 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
P20040 2310058D17Rik-201ENSMUST00000131221 3201 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
P20040 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
P20040 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC6.71□□□□□ -1.34
P20040 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
P20040 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
P20040 Gm42568-201ENSMUST00000195639 1841 ntBASIC6.71□□□□□ -1.34
P20040 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC6.71□□□□□ -1.34
P20040 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
P20040 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
P20040 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
P20040 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
P20040 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
P20040 Gm44752-201ENSMUST00000207140 3305 ntBASIC6.7□□□□□ -1.34
P20040 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
P20040 Nxpe4-201ENSMUST00000093853 3173 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
P20040 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC6.7□□□□□ -1.34
P20040 Mapre2-209ENSMUST00000170802 3936 ntAPPRIS ALT1 TSL 5 BASIC6.7□□□□□ -1.34
P20040 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
P20040 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
P20040 Npffr2-201ENSMUST00000048557 1643 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
P20040 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
P20040 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC6.7□□□□□ -1.34
P20040 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
P20040 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
P20040 Olfr1128-201ENSMUST00000102624 936 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
P20040 Smco3-202ENSMUST00000111894 1069 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
P20040 Gm8662-201ENSMUST00000118644 574 ntBASIC6.7□□□□□ -1.34
P20040 Gm11969-201ENSMUST00000118848 356 ntBASIC6.7□□□□□ -1.34
P20040 Gm11922-201ENSMUST00000118967 475 ntBASIC6.7□□□□□ -1.34
P20040 Gm13921-201ENSMUST00000119411 463 ntBASIC6.7□□□□□ -1.34
P20040 Gm11955-201ENSMUST00000119801 470 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms