Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 AC153847.1-201ENSMUST00000214524 353 ntBASIC13.69□□□□□ -0.22
Ccdc180J3QNE4 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC13.69□□□□□ -0.22
Ccdc180J3QNE4 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC13.69□□□□□ -0.22
Ccdc180J3QNE4 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Ccdc180J3QNE4 Hdac4-201ENSMUST00000008995 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc180J3QNE4 Pde7b-201ENSMUST00000020165 4137 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc180J3QNE4 Dph6-202ENSMUST00000055144 2476 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc180J3QNE4 Prpf40a-208ENSMUST00000210789 3773 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Ccdc180J3QNE4 Slco5a1-207ENSMUST00000188454 8463 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Ccdc180J3QNE4 C1qtnf7-201ENSMUST00000076939 3879 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc180J3QNE4 Rp1l1-201ENSMUST00000058229 6684 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc180J3QNE4 Uba1-202ENSMUST00000089217 4044 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc180J3QNE4 Gm43519-201ENSMUST00000197239 1872 ntBASIC13.69□□□□□ -0.22
Ccdc180J3QNE4 Pum3-201ENSMUST00000076219 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc180J3QNE4 Zswim9-202ENSMUST00000119139 3986 ntAPPRIS P5 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc180J3QNE4 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc180J3QNE4 Ebf2-201ENSMUST00000022637 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc180J3QNE4 Rassf2-202ENSMUST00000103182 4589 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ccdc180J3QNE4 Gm12903-201ENSMUST00000121015 544 ntBASIC13.69□□□□□ -0.22
Ccdc180J3QNE4 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc180J3QNE4 Il21-202ENSMUST00000161015 529 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc180J3QNE4 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc180J3QNE4 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc180J3QNE4 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC13.69□□□□□ -0.22
Ccdc180J3QNE4 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC13.69□□□□□ -0.22
Ccdc180J3QNE4 AC133958.1-201ENSMUST00000227085 961 ntBASIC13.69□□□□□ -0.22
Ccdc180J3QNE4 AC165155.1-201ENSMUST00000228932 445 ntBASIC13.69□□□□□ -0.22
Ccdc180J3QNE4 Dach2-205ENSMUST00000113382 5155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc180J3QNE4 Ppfia2-201ENSMUST00000029404 5429 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc180J3QNE4 Gm43496-201ENSMUST00000201682 3001 ntBASIC13.68□□□□□ -0.22
Ccdc180J3QNE4 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Ccdc180J3QNE4 Tmem161b-206ENSMUST00000225069 2414 ntBASIC13.68□□□□□ -0.22
Ccdc180J3QNE4 Olfr410-202ENSMUST00000213831 5070 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc180J3QNE4 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc180J3QNE4 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc180J3QNE4 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc180J3QNE4 Chek2-201ENSMUST00000066160 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc180J3QNE4 Olfr224-204ENSMUST00000217009 2098 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc180J3QNE4 Gm28649-201ENSMUST00000189153 1581 ntBASIC13.68□□□□□ -0.22
Ccdc180J3QNE4 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC13.68□□□□□ -0.22
Ccdc180J3QNE4 Gm18808-201ENSMUST00000173316 462 ntBASIC13.68□□□□□ -0.22
Ccdc180J3QNE4 Gm27360-201ENSMUST00000183487 80 ntBASIC13.68□□□□□ -0.22
Ccdc180J3QNE4 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc180J3QNE4 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc180J3QNE4 Gm18797-201ENSMUST00000190809 1174 ntBASIC13.68□□□□□ -0.22
Ccdc180J3QNE4 Gm44971-201ENSMUST00000206192 337 ntBASIC13.68□□□□□ -0.22
Ccdc180J3QNE4 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC13.68□□□□□ -0.22
Ccdc180J3QNE4 Gm19238-201ENSMUST00000221936 1260 ntBASIC13.68□□□□□ -0.22
Ccdc180J3QNE4 AC153152.2-201ENSMUST00000223165 959 ntBASIC13.68□□□□□ -0.22
Ccdc180J3QNE4 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Ccdc180J3QNE4 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC13.68□□□□□ -0.22
Ccdc180J3QNE4 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc180J3QNE4 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc180J3QNE4 Tmc2-202ENSMUST00000166774 2667 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Ccdc180J3QNE4 Gm10388-201ENSMUST00000205001 2936 ntBASIC13.68□□□□□ -0.22
Ccdc180J3QNE4 Gm6117-201ENSMUST00000150540 1333 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc180J3QNE4 Ank2-201ENSMUST00000044443 5775 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc180J3QNE4 Ncald-203ENSMUST00000119730 3295 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc180J3QNE4 Aebp2-201ENSMUST00000032359 5932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc180J3QNE4 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc180J3QNE4 5730455P16Rik-201ENSMUST00000103225 4554 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc180J3QNE4 Deptor-201ENSMUST00000023056 3300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc180J3QNE4 Gm22882-201ENSMUST00000157749 124 ntBASIC13.67□□□□□ -0.22
Ccdc180J3QNE4 Gm8305-201ENSMUST00000180022 1195 ntBASIC13.67□□□□□ -0.22
Ccdc180J3QNE4 Mir6403-201ENSMUST00000185007 129 ntBASIC13.67□□□□□ -0.22
Ccdc180J3QNE4 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc180J3QNE4 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC13.67□□□□□ -0.22
Ccdc180J3QNE4 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc180J3QNE4 Cd38-201ENSMUST00000030964 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc180J3QNE4 Gm44116-201ENSMUST00000204269 1525 ntBASIC13.67□□□□□ -0.22
Ccdc180J3QNE4 Vmn1r199-203ENSMUST00000227689 5537 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Ccdc180J3QNE4 Unc13d-203ENSMUST00000106451 3973 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc180J3QNE4 Fyco1-201ENSMUST00000084715 7949 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc180J3QNE4 Hfe-202ENSMUST00000091706 3572 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc180J3QNE4 Slc2a3-201ENSMUST00000032476 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc180J3QNE4 Gm44001-201ENSMUST00000203158 3773 ntBASIC13.66□□□□□ -0.22
Ccdc180J3QNE4 Cacna1c-209ENSMUST00000187386 6906 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc180J3QNE4 Aff1-202ENSMUST00000054979 8323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc180J3QNE4 Faf2-203ENSMUST00000126071 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc180J3QNE4 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Ccdc180J3QNE4 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc180J3QNE4 Gm14503-201ENSMUST00000130337 1164 ntBASIC13.66□□□□□ -0.22
Ccdc180J3QNE4 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC13.66□□□□□ -0.22
Ccdc180J3QNE4 Gm8550-201ENSMUST00000161621 653 ntBASIC13.66□□□□□ -0.22
Ccdc180J3QNE4 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc180J3QNE4 Gm27156-201ENSMUST00000184589 754 ntBASIC13.66□□□□□ -0.22
Ccdc180J3QNE4 Gm43595-201ENSMUST00000196464 1071 ntBASIC13.66□□□□□ -0.22
Ccdc180J3QNE4 AC154618.2-201ENSMUST00000228299 452 ntBASIC13.66□□□□□ -0.22
Ccdc180J3QNE4 Rad21-201ENSMUST00000022927 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc180J3QNE4 Zmynd8-206ENSMUST00000109269 6188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc180J3QNE4 Umodl1-201ENSMUST00000066554 5007 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc180J3QNE4 1700029M20Rik-203ENSMUST00000153347 2963 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc180J3QNE4 Adgrg1-202ENSMUST00000179619 3616 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc180J3QNE4 Plagl2-202ENSMUST00000109795 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc180J3QNE4 Olfr1426-204ENSMUST00000219005 2507 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc180J3QNE4 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC13.66□□□□□ -0.22
Ccdc180J3QNE4 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc180J3QNE4 Gm45297-201ENSMUST00000209893 3483 ntBASIC13.66□□□□□ -0.22
Ccdc180J3QNE4 Dysf-204ENSMUST00000113821 6803 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc180J3QNE4 Cs-201ENSMUST00000005826 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms