Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Nr6a1-201ENSMUST00000076275 5941 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Kif5a-202ENSMUST00000217895 3996 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Gm44284-201ENSMUST00000203836 3444 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Gm26575-201ENSMUST00000181714 2232 ntBASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 AC154634.1-201ENSMUST00000225225 2394 ntBASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Gm16508-201ENSMUST00000197066 2742 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Gm27601-201ENSMUST00000184794 127 ntBASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Gm29454-201ENSMUST00000190805 393 ntBASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Gm6631-201ENSMUST00000193699 559 ntBASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 AC125543.2-201ENSMUST00000222114 105 ntBASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Rybp-ps-201ENSMUST00000069489 681 ntBASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Gm23330-201ENSMUST00000082660 164 ntBASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Usp28-201ENSMUST00000047349 4133 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Cul2-201ENSMUST00000025073 3727 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Hadha-205ENSMUST00000156859 4017 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Akt3-201ENSMUST00000019843 1511 ntTSL 5 BASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Psmd10-201ENSMUST00000033805 1430 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Gm13013-201ENSMUST00000119087 523 ntBASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Gm26312-201ENSMUST00000157769 165 ntBASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Gm26528-201ENSMUST00000181965 283 ntBASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 G430049J08Rik-201ENSMUST00000179907 2686 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Phf6-201ENSMUST00000078944 4350 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Faf2-203ENSMUST00000126071 4322 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Gm5512-201ENSMUST00000218013 1353 ntBASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Dhx30-215ENSMUST00000198425 3968 ntTSL 5 BASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Gm4919-201ENSMUST00000117825 604 ntBASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Gm24176-201ENSMUST00000158928 121 ntBASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Gm2229-201ENSMUST00000193328 710 ntBASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Gm43012-201ENSMUST00000198569 937 ntBASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Tgm4-201ENSMUST00000026893 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Nt5dc1-201ENSMUST00000047885 2743 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Mat1a-203ENSMUST00000225720 3468 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Ppp2r5c-202ENSMUST00000109832 4108 ntTSL 2 BASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Gm44883-201ENSMUST00000206063 3258 ntBASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Unc5c-204ENSMUST00000130636 3595 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Gm23250-201ENSMUST00000157444 267 ntBASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Gm22990-201ENSMUST00000175427 89 ntBASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Gm3678-201ENSMUST00000218888 492 ntBASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Gm10126-201ENSMUST00000221732 168 ntBASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Gm40309-201ENSMUST00000202699 1752 ntBASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Ttc38-203ENSMUST00000146088 3749 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Zwilch-201ENSMUST00000122091 2957 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Mill1-201ENSMUST00000066780 2489 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Adh6a-201ENSMUST00000013455 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Gm42940-201ENSMUST00000200361 2362 ntBASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Pvt1-203ENSMUST00000181657 2798 ntTSL 5 BASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Col6a3E9PWQ3 Pex5l-208ENSMUST00000192093 3421 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Clasp2-202ENSMUST00000163895 4112 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Lgals8-207ENSMUST00000143693 2457 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Gm24230-201ENSMUST00000104313 129 ntBASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Gm26162-201ENSMUST00000157793 132 ntBASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC7.23□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms