Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Col4a6B1AVK5 Sf3b1-201ENSMUST00000027127 6195 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col4a6B1AVK5 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Col4a6B1AVK5 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col4a6B1AVK5 Gm43571-201ENSMUST00000200067 3098 ntBASIC7.7□□□□□ -1.18
Col4a6B1AVK5 Sema6a-203ENSMUST00000115449 6815 ntTSL 5 BASIC7.7□□□□□ -1.18
Col4a6B1AVK5 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Col4a6B1AVK5 Adgrl3-209ENSMUST00000119385 4905 ntTSL 5 BASIC7.7□□□□□ -1.18
Col4a6B1AVK5 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col4a6B1AVK5 Mtfr1-202ENSMUST00000117529 1896 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col4a6B1AVK5 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Col4a6B1AVK5 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Col4a6B1AVK5 Npm1-204ENSMUST00000109354 1157 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Col4a6B1AVK5 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC7.7□□□□□ -1.18
Col4a6B1AVK5 Gm5166-201ENSMUST00000121332 573 ntBASIC7.7□□□□□ -1.18
Col4a6B1AVK5 Gm14695-201ENSMUST00000121721 282 ntBASIC7.7□□□□□ -1.18
Col4a6B1AVK5 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Col4a6B1AVK5 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Col4a6B1AVK5 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC7.7□□□□□ -1.18
Col4a6B1AVK5 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC7.7□□□□□ -1.18
Col4a6B1AVK5 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Col4a6B1AVK5 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC7.7□□□□□ -1.18
Col4a6B1AVK5 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC7.7□□□□□ -1.18
Col4a6B1AVK5 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC7.7□□□□□ -1.18
Col4a6B1AVK5 Gm9240-201ENSMUST00000206527 742 ntBASIC7.7□□□□□ -1.18
Col4a6B1AVK5 Gm2975-201ENSMUST00000209710 820 ntBASIC7.7□□□□□ -1.18
Col4a6B1AVK5 Gm9118-201ENSMUST00000219246 754 ntBASIC7.7□□□□□ -1.18
Col4a6B1AVK5 Gm5528-201ENSMUST00000076314 480 ntBASIC7.7□□□□□ -1.18
Col4a6B1AVK5 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Col4a6B1AVK5 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col4a6B1AVK5 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col4a6B1AVK5 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Col4a6B1AVK5 Gm10419-204ENSMUST00000198585 4059 ntTSL 2 BASIC7.7□□□□□ -1.18
Col4a6B1AVK5 Gm34730-201ENSMUST00000210674 4077 ntTSL 5 BASIC7.7□□□□□ -1.18
Col4a6B1AVK5 Olfr1509-206ENSMUST00000215030 2525 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Col4a6B1AVK5 Gm28906-201ENSMUST00000191371 1779 ntBASIC7.69□□□□□ -1.18
Col4a6B1AVK5 Dqx1-201ENSMUST00000077502 3257 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Col4a6B1AVK5 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Col4a6B1AVK5 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Col4a6B1AVK5 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Col4a6B1AVK5 Gm43292-201ENSMUST00000199580 2449 ntBASIC7.69□□□□□ -1.18
Col4a6B1AVK5 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Col4a6B1AVK5 Mr1-201ENSMUST00000027744 2512 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col4a6B1AVK5 Gm42514-201ENSMUST00000196636 1832 ntBASIC7.69□□□□□ -1.18
Col4a6B1AVK5 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Col4a6B1AVK5 Adhfe1-203ENSMUST00000144177 3239 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col4a6B1AVK5 CT010505.3-201ENSMUST00000227835 1651 ntBASIC7.69□□□□□ -1.18
Col4a6B1AVK5 Kdm5a-201ENSMUST00000005108 10944 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Col4a6B1AVK5 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Col4a6B1AVK5 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col4a6B1AVK5 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC7.69□□□□□ -1.18
Col4a6B1AVK5 Gm13732-201ENSMUST00000117753 535 ntBASIC7.69□□□□□ -1.18
Col4a6B1AVK5 Gm11443-201ENSMUST00000118790 479 ntBASIC7.69□□□□□ -1.18
Col4a6B1AVK5 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Col4a6B1AVK5 Gm24545-201ENSMUST00000158651 85 ntBASIC7.69□□□□□ -1.18
Col4a6B1AVK5 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC7.69□□□□□ -1.18
Col4a6B1AVK5 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Col4a6B1AVK5 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC7.69□□□□□ -1.18
Col4a6B1AVK5 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC7.69□□□□□ -1.18
Col4a6B1AVK5 Ighv1-14-201ENSMUST00000194015 402 ntBASIC7.69□□□□□ -1.18
Col4a6B1AVK5 Gm44546-201ENSMUST00000208353 368 ntTSL 2 BASIC7.69□□□□□ -1.18
Col4a6B1AVK5 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC7.69□□□□□ -1.18
Col4a6B1AVK5 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Col4a6B1AVK5 Slc11a2-205ENSMUST00000138843 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col4a6B1AVK5 Cdkl5-205ENSMUST00000198931 9796 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Col4a6B1AVK5 Gm14976-201ENSMUST00000117055 1394 ntBASIC7.69□□□□□ -1.18
Col4a6B1AVK5 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Col4a6B1AVK5 Gm35808-201ENSMUST00000204769 2602 ntBASIC7.69□□□□□ -1.18
Col4a6B1AVK5 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col4a6B1AVK5 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC7.69□□□□□ -1.18
Col4a6B1AVK5 Gm10556-201ENSMUST00000180904 3906 ntTSL 2 BASIC7.69□□□□□ -1.18
Col4a6B1AVK5 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col4a6B1AVK5 9030624J02Rik-201ENSMUST00000033280 2934 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Col4a6B1AVK5 Gm18957-201ENSMUST00000197623 1813 ntBASIC7.68□□□□□ -1.18
Col4a6B1AVK5 Tmc2-202ENSMUST00000166774 2667 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
Col4a6B1AVK5 Pcdh15-241ENSMUST00000195531 5241 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
Col4a6B1AVK5 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col4a6B1AVK5 Lin54-202ENSMUST00000123572 4592 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col4a6B1AVK5 Patj-202ENSMUST00000041284 7340 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col4a6B1AVK5 Plec-215ENSMUST00000169108 14853 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col4a6B1AVK5 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Col4a6B1AVK5 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col4a6B1AVK5 Aebp1-201ENSMUST00000102923 3831 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col4a6B1AVK5 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col4a6B1AVK5 Chid1-203ENSMUST00000118694 3910 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Col4a6B1AVK5 Nr3c1-202ENSMUST00000097592 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col4a6B1AVK5 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Col4a6B1AVK5 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col4a6B1AVK5 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC7.68□□□□□ -1.18
Col4a6B1AVK5 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col4a6B1AVK5 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Col4a6B1AVK5 Olfr634-ps1-201ENSMUST00000119267 955 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Col4a6B1AVK5 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Col4a6B1AVK5 Gm25395-201ENSMUST00000157343 272 ntBASIC7.68□□□□□ -1.18
Col4a6B1AVK5 Mir5110-201ENSMUST00000175537 87 ntBASIC7.68□□□□□ -1.18
Col4a6B1AVK5 6720483E21Rik-201ENSMUST00000181654 1120 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Col4a6B1AVK5 Gm8609-201ENSMUST00000182967 998 ntBASIC7.68□□□□□ -1.18
Col4a6B1AVK5 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC7.68□□□□□ -1.18
Col4a6B1AVK5 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Col4a6B1AVK5 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC7.68□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms