Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Pfkfb3-206ENSMUST00000114846 4634 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.24
Upk3aQ9JKX8 Adgrl2-202ENSMUST00000106128 6052 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.24
Upk3aQ9JKX8 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC7.27□□□□□ -1.24
Upk3aQ9JKX8 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
Upk3aQ9JKX8 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
Upk3aQ9JKX8 Dph6-202ENSMUST00000055144 2476 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
Upk3aQ9JKX8 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 Zfp641-202ENSMUST00000169721 3673 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 Zp2-205ENSMUST00000208874 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 Erc1-210ENSMUST00000184864 5428 ntAPPRIS ALT1 TSL 5 BASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 Cyfip1-202ENSMUST00000085255 4195 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 Mybbp1a-201ENSMUST00000045633 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 Helz2-203ENSMUST00000121484 10063 ntTSL 5 BASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 Plch1-208ENSMUST00000160638 6271 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 Gm13352-201ENSMUST00000117515 262 ntBASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 Gm15913-201ENSMUST00000118492 331 ntBASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 Scgb1b28-ps-201ENSMUST00000163647 290 ntBASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 Gm20702-201ENSMUST00000176181 460 ntBASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 Mir7115-201ENSMUST00000184275 64 ntBASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 Gm28535-201ENSMUST00000188069 885 ntTSL 3 BASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 Gm29230-201ENSMUST00000189687 412 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 Gm19035-202ENSMUST00000194575 959 ntBASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 AF067063-202ENSMUST00000195234 885 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 Gm37724-201ENSMUST00000195240 1221 ntBASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 Gm5586-201ENSMUST00000206264 795 ntBASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 A330076H08Rik-203ENSMUST00000208822 1164 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 Gm17199-201ENSMUST00000097296 416 ntBASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 Ash1l-202ENSMUST00000186583 11644 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 Gm37663-201ENSMUST00000191887 2299 ntBASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 6530403H02Rik-202ENSMUST00000182124 3191 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 Ganc-205ENSMUST00000135074 4780 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 Ptprj-201ENSMUST00000111493 7124 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 Pnisr-201ENSMUST00000029911 4545 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 Gm12695-201ENSMUST00000107071 1904 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Upk3aQ9JKX8 5330416C01Rik-203ENSMUST00000144993 3287 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Upk3aQ9JKX8 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Upk3aQ9JKX8 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Upk3aQ9JKX8 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Upk3aQ9JKX8 AC153564.1-201ENSMUST00000217771 3607 ntTSL 5 BASIC7.26□□□□□ -1.25
Upk3aQ9JKX8 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC7.26□□□□□ -1.25
Upk3aQ9JKX8 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Upk3aQ9JKX8 Klf10-202ENSMUST00000226363 2917 ntBASIC7.26□□□□□ -1.25
Upk3aQ9JKX8 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Upk3aQ9JKX8 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Upk3aQ9JKX8 Gm15575-201ENSMUST00000119414 1581 ntBASIC7.26□□□□□ -1.25
Upk3aQ9JKX8 Gm2654-201ENSMUST00000221381 1592 ntBASIC7.26□□□□□ -1.25
Upk3aQ9JKX8 Olfr544-201ENSMUST00000051201 3270 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
Upk3aQ9JKX8 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC7.26□□□□□ -1.25
Upk3aQ9JKX8 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
Upk3aQ9JKX8 Gm14891-201ENSMUST00000117378 596 ntBASIC7.26□□□□□ -1.25
Upk3aQ9JKX8 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Upk3aQ9JKX8 Gm15606-202ENSMUST00000139851 711 ntTSL 3 BASIC7.26□□□□□ -1.25
Upk3aQ9JKX8 Il1rn-205ENSMUST00000142093 321 ntTSL 3 BASIC7.26□□□□□ -1.25
Upk3aQ9JKX8 Gm12868-201ENSMUST00000143801 417 ntTSL 3 BASIC7.26□□□□□ -1.25
Upk3aQ9JKX8 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Upk3aQ9JKX8 Mir3078-201ENSMUST00000175231 87 ntBASIC7.26□□□□□ -1.25
Upk3aQ9JKX8 4930526L06Rik-201ENSMUST00000181137 1022 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Upk3aQ9JKX8 1700020D05Rik-201ENSMUST00000189704 1021 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Upk3aQ9JKX8 Olfr318-201ENSMUST00000189911 1026 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Upk3aQ9JKX8 Gm36945-201ENSMUST00000192040 864 ntTSL 3 BASIC7.26□□□□□ -1.25
Upk3aQ9JKX8 Gm44356-201ENSMUST00000196731 111 ntBASIC7.26□□□□□ -1.25
Upk3aQ9JKX8 1700021F02Rik-201ENSMUST00000197576 350 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Upk3aQ9JKX8 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC7.26□□□□□ -1.25
Upk3aQ9JKX8 Gm43558-201ENSMUST00000200155 210 ntBASIC7.26□□□□□ -1.25
Upk3aQ9JKX8 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC7.26□□□□□ -1.25
Upk3aQ9JKX8 Gm8077-201ENSMUST00000209221 1024 ntBASIC7.26□□□□□ -1.25
Upk3aQ9JKX8 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC7.26□□□□□ -1.25
Upk3aQ9JKX8 Zfp874a-208ENSMUST00000225479 1092 ntBASIC7.26□□□□□ -1.25
Upk3aQ9JKX8 AC110176.1-201ENSMUST00000226219 504 ntBASIC7.26□□□□□ -1.25
Upk3aQ9JKX8 AC154627.1-201ENSMUST00000228799 1286 ntBASIC7.26□□□□□ -1.25
Upk3aQ9JKX8 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Upk3aQ9JKX8 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Upk3aQ9JKX8 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Upk3aQ9JKX8 Slc41a2-201ENSMUST00000039956 4742 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Upk3aQ9JKX8 Spen-201ENSMUST00000078886 12082 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Upk3aQ9JKX8 Dglucy-208ENSMUST00000167322 2941 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms