Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Nup88Q8CEC0 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Nup88Q8CEC0 Senp6-203ENSMUST00000165607 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Nup88Q8CEC0 CT009711.1-201ENSMUST00000223992 3040 ntBASIC8.95□□□□□ -0.98
Nup88Q8CEC0 Zmym5-202ENSMUST00000111285 5351 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Nup88Q8CEC0 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Nup88Q8CEC0 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC8.95□□□□□ -0.98
Nup88Q8CEC0 Gm12967-201ENSMUST00000122147 289 ntBASIC8.95□□□□□ -0.98
Nup88Q8CEC0 Gm13649-201ENSMUST00000122325 606 ntBASIC8.95□□□□□ -0.98
Nup88Q8CEC0 Pla2g2a-203ENSMUST00000135748 788 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Nup88Q8CEC0 Gm11186-201ENSMUST00000137096 1179 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Nup88Q8CEC0 1810062O18Rik-204ENSMUST00000141265 751 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Nup88Q8CEC0 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Nup88Q8CEC0 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC8.95□□□□□ -0.98
Nup88Q8CEC0 A930031H19Rik-202ENSMUST00000153810 949 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Nup88Q8CEC0 Svs5-201ENSMUST00000017148 628 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Nup88Q8CEC0 Olfr270-202ENSMUST00000172257 939 ntAPPRIS P2 BASIC8.95□□□□□ -0.98
Nup88Q8CEC0 Gm8167-201ENSMUST00000183320 958 ntBASIC8.95□□□□□ -0.98
Nup88Q8CEC0 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC8.95□□□□□ -0.98
Nup88Q8CEC0 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Nup88Q8CEC0 Cacnb2-216ENSMUST00000195841 503 ntTSL 3 BASIC8.95□□□□□ -0.98
Nup88Q8CEC0 Gm42464-202ENSMUST00000198111 774 ntBASIC8.95□□□□□ -0.98
Nup88Q8CEC0 Gm40319-201ENSMUST00000199785 481 ntBASIC8.95□□□□□ -0.98
Nup88Q8CEC0 Gm8667-201ENSMUST00000211112 449 ntBASIC8.95□□□□□ -0.98
Nup88Q8CEC0 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Nup88Q8CEC0 Gm19428-202ENSMUST00000220573 1038 ntTSL 5 BASIC8.95□□□□□ -0.98
Nup88Q8CEC0 AC124196.1-201ENSMUST00000225970 1032 ntBASIC8.95□□□□□ -0.98
Nup88Q8CEC0 Vmn1r41-204ENSMUST00000227039 985 ntBASIC8.95□□□□□ -0.98
Nup88Q8CEC0 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Nup88Q8CEC0 Cbx3-202ENSMUST00000094623 1080 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Nup88Q8CEC0 Nlrc5-201ENSMUST00000053085 6945 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Nup88Q8CEC0 Gm44249-201ENSMUST00000204538 1805 ntBASIC8.95□□□□□ -0.98
Nup88Q8CEC0 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Nup88Q8CEC0 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Nup88Q8CEC0 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Nup88Q8CEC0 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC8.95□□□□□ -0.98
Nup88Q8CEC0 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Nup88Q8CEC0 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Nup88Q8CEC0 Olfr75-ps1-202ENSMUST00000141956 2500 ntTSL 2 BASIC8.95□□□□□ -0.98
Nup88Q8CEC0 Antxrl-201ENSMUST00000058725 2532 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Nup88Q8CEC0 Mllt3-202ENSMUST00000126353 1956 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Nup88Q8CEC0 Gm43537-201ENSMUST00000199064 3110 ntBASIC8.95□□□□□ -0.98
Nup88Q8CEC0 Slc22a26-201ENSMUST00000065634 2007 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Nup88Q8CEC0 Abcc1-201ENSMUST00000100167 6792 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Nup88Q8CEC0 Gm6729-201ENSMUST00000165173 1452 ntBASIC8.95□□□□□ -0.98
Nup88Q8CEC0 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Nup88Q8CEC0 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Nup88Q8CEC0 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Nup88Q8CEC0 Ermard-204ENSMUST00000097395 1593 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Nup88Q8CEC0 AI182371-207ENSMUST00000226972 1642 ntAPPRIS ALT2 BASIC8.94□□□□□ -0.98
Nup88Q8CEC0 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Nup88Q8CEC0 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC8.94□□□□□ -0.98
Nup88Q8CEC0 Gm17552-201ENSMUST00000181211 3877 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Nup88Q8CEC0 Ston1-201ENSMUST00000064035 3287 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
Nup88Q8CEC0 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Nup88Q8CEC0 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Nup88Q8CEC0 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC8.94□□□□□ -0.98
Nup88Q8CEC0 Cd247-208ENSMUST00000178336 2807 ntTSL 5 BASIC8.94□□□□□ -0.98
Nup88Q8CEC0 Ncoa7-209ENSMUST00000216172 2026 ntAPPRIS ALT1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Nup88Q8CEC0 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Nup88Q8CEC0 Gm22439-201ENSMUST00000104048 132 ntBASIC8.94□□□□□ -0.98
Nup88Q8CEC0 Epc1-203ENSMUST00000115870 3817 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Nup88Q8CEC0 Gm7129-201ENSMUST00000117402 997 ntBASIC8.94□□□□□ -0.98
Nup88Q8CEC0 Gm11922-201ENSMUST00000118967 475 ntBASIC8.94□□□□□ -0.98
Nup88Q8CEC0 Gm16407-201ENSMUST00000122134 567 ntBASIC8.94□□□□□ -0.98
Nup88Q8CEC0 Gm23392-201ENSMUST00000157580 113 ntBASIC8.94□□□□□ -0.98
Nup88Q8CEC0 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC8.94□□□□□ -0.98
Nup88Q8CEC0 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Nup88Q8CEC0 Gm20452-201ENSMUST00000174686 513 ntBASIC8.94□□□□□ -0.98
Nup88Q8CEC0 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Nup88Q8CEC0 Gm5541-201ENSMUST00000193248 1113 ntBASIC8.94□□□□□ -0.98
Nup88Q8CEC0 4930584F24Rik-204ENSMUST00000198070 1163 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Nup88Q8CEC0 Gm3103-201ENSMUST00000198073 752 ntBASIC8.94□□□□□ -0.98
Nup88Q8CEC0 Gm19172-201ENSMUST00000203170 1246 ntBASIC8.94□□□□□ -0.98
Nup88Q8CEC0 Gm18484-201ENSMUST00000204389 991 ntBASIC8.94□□□□□ -0.98
Nup88Q8CEC0 Gm32486-201ENSMUST00000209810 3816 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Nup88Q8CEC0 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC8.94□□□□□ -0.98
Nup88Q8CEC0 Rpl27a-ps1-201ENSMUST00000075382 448 ntBASIC8.94□□□□□ -0.98
Nup88Q8CEC0 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC8.94□□□□□ -0.98
Nup88Q8CEC0 Gm4863-201ENSMUST00000196907 1381 ntBASIC8.94□□□□□ -0.98
Nup88Q8CEC0 Srcap-214ENSMUST00000190390 9633 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Nup88Q8CEC0 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Nup88Q8CEC0 Enox2-204ENSMUST00000114914 3936 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Nup88Q8CEC0 Nwd1-204ENSMUST00000161254 10792 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Nup88Q8CEC0 R3hdm2-204ENSMUST00000105250 3975 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Nup88Q8CEC0 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Nup88Q8CEC0 Gm43099-201ENSMUST00000198943 5241 ntBASIC8.94□□□□□ -0.98
Nup88Q8CEC0 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC8.94□□□□□ -0.98
Nup88Q8CEC0 St8sia4-201ENSMUST00000043336 5390 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Nup88Q8CEC0 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Gm45635-201ENSMUST00000211516 2134 ntBASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Tdrkh-204ENSMUST00000196606 2586 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Gm45807-201ENSMUST00000209142 2874 ntBASIC8.93□□□□□ -0.98
Nup88Q8CEC0 C1s1-204ENSMUST00000162443 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Cypt3-202ENSMUST00000112573 669 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Rpl35a-202ENSMUST00000115075 518 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Mageb8-ps-201ENSMUST00000117228 1033 ntBASIC8.93□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms