Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CtifQ6PEE2 AC103672.2-201ENSMUST00000228146 1687 ntBASIC8.08□□□□□ -1.12
CtifQ6PEE2 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CtifQ6PEE2 Gm14245-201ENSMUST00000118939 1843 ntBASIC8.08□□□□□ -1.12
CtifQ6PEE2 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CtifQ6PEE2 Gm37107-201ENSMUST00000195326 2552 ntBASIC8.08□□□□□ -1.12
CtifQ6PEE2 Pde1c-205ENSMUST00000166102 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CtifQ6PEE2 Cflar-205ENSMUST00000114313 6572 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
CtifQ6PEE2 Exoc3-201ENSMUST00000035934 4922 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CtifQ6PEE2 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CtifQ6PEE2 Wdfy4-201ENSMUST00000061753 9681 ntAPPRIS P2 TSL 5 BASIC8.07□□□□□ -1.12
CtifQ6PEE2 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
CtifQ6PEE2 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CtifQ6PEE2 4933416E14Rik-202ENSMUST00000137955 1938 ntBASIC8.07□□□□□ -1.12
CtifQ6PEE2 AC135083.2-201ENSMUST00000228599 1456 ntBASIC8.07□□□□□ -1.12
CtifQ6PEE2 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
CtifQ6PEE2 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CtifQ6PEE2 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
CtifQ6PEE2 Nek7-203ENSMUST00000187407 4336 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
CtifQ6PEE2 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
CtifQ6PEE2 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CtifQ6PEE2 Gm19337-201ENSMUST00000218100 1584 ntBASIC8.07□□□□□ -1.12
CtifQ6PEE2 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CtifQ6PEE2 Gm14419-201ENSMUST00000108975 683 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CtifQ6PEE2 Gm14435-201ENSMUST00000108995 643 ntAPPRIS P5 TSL 2 BASIC8.07□□□□□ -1.12
CtifQ6PEE2 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CtifQ6PEE2 Gm14158-201ENSMUST00000118409 308 ntBASIC8.07□□□□□ -1.12
CtifQ6PEE2 Gm15355-201ENSMUST00000118929 285 ntBASIC8.07□□□□□ -1.12
CtifQ6PEE2 Gm13655-201ENSMUST00000119695 745 ntBASIC8.07□□□□□ -1.12
CtifQ6PEE2 Gm15571-201ENSMUST00000119887 637 ntBASIC8.07□□□□□ -1.12
CtifQ6PEE2 Gm12692-201ENSMUST00000121092 546 ntBASIC8.07□□□□□ -1.12
CtifQ6PEE2 Gm15694-201ENSMUST00000121984 283 ntBASIC8.07□□□□□ -1.12
CtifQ6PEE2 Gm14212-201ENSMUST00000122023 826 ntBASIC8.07□□□□□ -1.12
CtifQ6PEE2 Mlip-212ENSMUST00000184848 1019 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CtifQ6PEE2 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC8.07□□□□□ -1.12
CtifQ6PEE2 Gm19080-201ENSMUST00000196082 550 ntBASIC8.07□□□□□ -1.12
CtifQ6PEE2 Vmn2r-ps91-201ENSMUST00000213039 784 ntBASIC8.07□□□□□ -1.12
CtifQ6PEE2 AC153798.1-201ENSMUST00000219942 244 ntBASIC8.07□□□□□ -1.12
CtifQ6PEE2 Timm8b-201ENSMUST00000044051 518 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CtifQ6PEE2 Olfr24-201ENSMUST00000066997 1157 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
CtifQ6PEE2 Prp2-201ENSMUST00000076061 1074 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
CtifQ6PEE2 Ddias-201ENSMUST00000032877 3387 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CtifQ6PEE2 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
CtifQ6PEE2 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
CtifQ6PEE2 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC8.07□□□□□ -1.12
CtifQ6PEE2 Gm45358-201ENSMUST00000209492 2305 ntBASIC8.07□□□□□ -1.12
CtifQ6PEE2 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC8.07□□□□□ -1.12
CtifQ6PEE2 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC8.07□□□□□ -1.12
CtifQ6PEE2 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CtifQ6PEE2 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC8.07□□□□□ -1.12
CtifQ6PEE2 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
CtifQ6PEE2 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CtifQ6PEE2 Gm6494-201ENSMUST00000218604 2298 ntBASIC8.06□□□□□ -1.12
CtifQ6PEE2 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CtifQ6PEE2 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CtifQ6PEE2 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
CtifQ6PEE2 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC8.06□□□□□ -1.12
CtifQ6PEE2 AC112680.1-201ENSMUST00000215435 1349 ntBASIC8.06□□□□□ -1.12
CtifQ6PEE2 Gm40778-201ENSMUST00000217825 1344 ntBASIC8.06□□□□□ -1.12
CtifQ6PEE2 Gm20121-201ENSMUST00000198547 1594 ntBASIC8.06□□□□□ -1.12
CtifQ6PEE2 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC8.06□□□□□ -1.12
CtifQ6PEE2 Ptprj-201ENSMUST00000111493 7124 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
CtifQ6PEE2 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
CtifQ6PEE2 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC8.06□□□□□ -1.12
CtifQ6PEE2 Scd3-201ENSMUST00000026220 3470 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CtifQ6PEE2 AC129085.2-201ENSMUST00000223763 2800 ntBASIC8.06□□□□□ -1.12
CtifQ6PEE2 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
CtifQ6PEE2 Gm25095-201ENSMUST00000104047 131 ntBASIC8.06□□□□□ -1.12
CtifQ6PEE2 Uqcrq-202ENSMUST00000109019 504 ntTSL 2 BASIC8.06□□□□□ -1.12
CtifQ6PEE2 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC8.06□□□□□ -1.12
CtifQ6PEE2 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC8.06□□□□□ -1.12
CtifQ6PEE2 Gm11343-201ENSMUST00000120579 599 ntBASIC8.06□□□□□ -1.12
CtifQ6PEE2 Gm12518-201ENSMUST00000122075 779 ntBASIC8.06□□□□□ -1.12
CtifQ6PEE2 Gm14813-201ENSMUST00000122291 395 ntBASIC8.06□□□□□ -1.12
CtifQ6PEE2 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CtifQ6PEE2 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC8.06□□□□□ -1.12
CtifQ6PEE2 Samd13-204ENSMUST00000147113 729 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
CtifQ6PEE2 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CtifQ6PEE2 Gm9286-201ENSMUST00000173586 508 ntBASIC8.06□□□□□ -1.12
CtifQ6PEE2 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
CtifQ6PEE2 Gm22461-201ENSMUST00000175272 70 ntBASIC8.06□□□□□ -1.12
CtifQ6PEE2 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CtifQ6PEE2 Ing5-203ENSMUST00000190476 918 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CtifQ6PEE2 Gm32921-201ENSMUST00000200592 810 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CtifQ6PEE2 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC8.06□□□□□ -1.12
CtifQ6PEE2 AC153864.1-201ENSMUST00000218482 523 ntBASIC8.06□□□□□ -1.12
CtifQ6PEE2 AC154760.1-201ENSMUST00000227218 673 ntBASIC8.06□□□□□ -1.12
CtifQ6PEE2 AC130219.2-201ENSMUST00000228765 807 ntBASIC8.06□□□□□ -1.12
CtifQ6PEE2 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
CtifQ6PEE2 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
CtifQ6PEE2 D130007C19Rik-201ENSMUST00000067277 1505 ntBASIC8.06□□□□□ -1.12
CtifQ6PEE2 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CtifQ6PEE2 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
CtifQ6PEE2 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CtifQ6PEE2 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC8.06□□□□□ -1.12
CtifQ6PEE2 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC8.06□□□□□ -1.12
CtifQ6PEE2 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
CtifQ6PEE2 Vwa3b-206ENSMUST00000169057 1499 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
CtifQ6PEE2 Gm26705-201ENSMUST00000180761 1457 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CtifQ6PEE2 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms