Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Greb1-212ENSMUST00000162112 8058 ntAPPRIS P3 TSL 5 BASIC9.04□□□□□ -0.96
Vps54Q5SPW0 Gm43686-201ENSMUST00000197351 2439 ntBASIC9.04□□□□□ -0.96
Vps54Q5SPW0 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC9.04□□□□□ -0.96
Vps54Q5SPW0 Afm-201ENSMUST00000113179 2038 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Vps54Q5SPW0 Zfp939-202ENSMUST00000186855 2480 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Vps54Q5SPW0 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Vps54Q5SPW0 Rassf6-206ENSMUST00000202784 1919 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Vps54Q5SPW0 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Vps54Q5SPW0 Ggta1-205ENSMUST00000113002 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Vps54Q5SPW0 Zhx3-201ENSMUST00000103111 9563 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Vps54Q5SPW0 Gm23701-201ENSMUST00000103893 110 ntBASIC9.04□□□□□ -0.96
Vps54Q5SPW0 Fate1-202ENSMUST00000114569 1053 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Vps54Q5SPW0 Gm16057-201ENSMUST00000120811 759 ntBASIC9.04□□□□□ -0.96
Vps54Q5SPW0 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Vps54Q5SPW0 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC9.04□□□□□ -0.96
Vps54Q5SPW0 Gm15606-202ENSMUST00000139851 711 ntTSL 3 BASIC9.04□□□□□ -0.96
Vps54Q5SPW0 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Vps54Q5SPW0 Gm15286-201ENSMUST00000150623 743 ntTSL 3 BASIC9.04□□□□□ -0.96
Vps54Q5SPW0 Cd48-201ENSMUST00000015499 922 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Vps54Q5SPW0 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Vps54Q5SPW0 Rsph10b-204ENSMUST00000169758 702 ntTSL 5 BASIC9.04□□□□□ -0.96
Vps54Q5SPW0 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Vps54Q5SPW0 Gm28142-201ENSMUST00000186899 698 ntBASIC9.04□□□□□ -0.96
Vps54Q5SPW0 Gm20917-202ENSMUST00000188706 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Vps54Q5SPW0 Gm29008-201ENSMUST00000189387 298 ntBASIC9.04□□□□□ -0.96
Vps54Q5SPW0 Gm4785-201ENSMUST00000191025 751 ntBASIC9.04□□□□□ -0.96
Vps54Q5SPW0 Gm38328-201ENSMUST00000195582 317 ntBASIC9.04□□□□□ -0.96
Vps54Q5SPW0 Gm44577-201ENSMUST00000207413 1284 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Vps54Q5SPW0 Gm4972-201ENSMUST00000211108 1254 ntBASIC9.04□□□□□ -0.96
Vps54Q5SPW0 Gm45506-201ENSMUST00000211620 280 ntBASIC9.04□□□□□ -0.96
Vps54Q5SPW0 Gm45764-201ENSMUST00000213047 571 ntTSL 5 BASIC9.04□□□□□ -0.96
Vps54Q5SPW0 CT009550.2-201ENSMUST00000228851 399 ntBASIC9.04□□□□□ -0.96
Vps54Q5SPW0 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Vps54Q5SPW0 Gm37995-201ENSMUST00000194958 1714 ntBASIC9.04□□□□□ -0.96
Vps54Q5SPW0 Zfp882-201ENSMUST00000110002 3152 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Vps54Q5SPW0 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Vps54Q5SPW0 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Vps54Q5SPW0 Dclre1b-204ENSMUST00000106834 3705 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Vps54Q5SPW0 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Vps54Q5SPW0 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Vps54Q5SPW0 Nr3c1-202ENSMUST00000097592 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Vps54Q5SPW0 D3Ertd254e-202ENSMUST00000197653 6689 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Vps54Q5SPW0 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Vps54Q5SPW0 Slc17a6-201ENSMUST00000032710 4137 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Vps54Q5SPW0 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Vps54Q5SPW0 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Vps54Q5SPW0 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Vps54Q5SPW0 Gm43533-201ENSMUST00000202933 2936 ntBASIC9.03□□□□□ -0.96
Vps54Q5SPW0 Nf1-201ENSMUST00000071325 11917 ntAPPRIS P2 TSL 2 BASIC9.03□□□□□ -0.96
Vps54Q5SPW0 Olfr1219-205ENSMUST00000217421 5849 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Vps54Q5SPW0 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Vps54Q5SPW0 Mir683-2-201ENSMUST00000102099 109 ntBASIC9.03□□□□□ -0.96
Vps54Q5SPW0 Gm22426-201ENSMUST00000103811 96 ntBASIC9.03□□□□□ -0.96
Vps54Q5SPW0 4930599N23Rik-201ENSMUST00000146981 880 ntTSL 2 BASIC9.03□□□□□ -0.96
Vps54Q5SPW0 Gm12484-201ENSMUST00000156311 581 ntTSL 5 BASIC9.03□□□□□ -0.96
Vps54Q5SPW0 Olfr759-ps1-201ENSMUST00000174238 700 ntBASIC9.03□□□□□ -0.96
Vps54Q5SPW0 Mir683-1-201ENSMUST00000179371 109 ntBASIC9.03□□□□□ -0.96
Vps54Q5SPW0 Gm3121-201ENSMUST00000187086 406 ntBASIC9.03□□□□□ -0.96
Vps54Q5SPW0 Gm7369-201ENSMUST00000192738 936 ntBASIC9.03□□□□□ -0.96
Vps54Q5SPW0 Gm2505-201ENSMUST00000200413 825 ntBASIC9.03□□□□□ -0.96
Vps54Q5SPW0 Gm44487-201ENSMUST00000205145 325 ntBASIC9.03□□□□□ -0.96
Vps54Q5SPW0 0610006L08Rik-202ENSMUST00000206672 803 ntTSL 3 BASIC9.03□□□□□ -0.96
Vps54Q5SPW0 B230303A05Rik-202ENSMUST00000220728 478 ntBASIC9.03□□□□□ -0.96
Vps54Q5SPW0 Gm20302-201ENSMUST00000080671 275 ntBASIC9.03□□□□□ -0.96
Vps54Q5SPW0 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Vps54Q5SPW0 Gm37499-201ENSMUST00000194683 3478 ntBASIC9.03□□□□□ -0.96
Vps54Q5SPW0 Gpbp1l1-202ENSMUST00000106475 2642 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Vps54Q5SPW0 Cdh16-204ENSMUST00000211903 2874 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Vps54Q5SPW0 Adgrl2-202ENSMUST00000106128 6052 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Vps54Q5SPW0 AC158605.4-201ENSMUST00000219013 3361 ntBASIC9.03□□□□□ -0.96
Vps54Q5SPW0 Acaca-201ENSMUST00000020843 9026 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Vps54Q5SPW0 Gm37706-201ENSMUST00000195379 2765 ntBASIC9.03□□□□□ -0.96
Vps54Q5SPW0 Gm7265-201ENSMUST00000192735 3502 ntBASIC9.03□□□□□ -0.96
Vps54Q5SPW0 Gm43422-201ENSMUST00000199780 3571 ntBASIC9.03□□□□□ -0.96
Vps54Q5SPW0 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Vps54Q5SPW0 Osbpl3-204ENSMUST00000114468 6494 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Vps54Q5SPW0 Gm10424-202ENSMUST00000201031 1848 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Vps54Q5SPW0 Ehbp1-207ENSMUST00000180360 4971 ntAPPRIS P3 TSL 5 BASIC9.03□□□□□ -0.96
Vps54Q5SPW0 Gm6117-201ENSMUST00000150540 1333 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Vps54Q5SPW0 Svil-210ENSMUST00000140448 7423 ntAPPRIS P3 TSL 5 BASIC9.03□□□□□ -0.96
Vps54Q5SPW0 Elf5-201ENSMUST00000028609 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Vps54Q5SPW0 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC9.03□□□□□ -0.96
Vps54Q5SPW0 Gm19325-201ENSMUST00000186238 3382 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Vps54Q5SPW0 AC165260.6-205ENSMUST00000224190 9762 ntBASIC9.02□□□□□ -0.96
Vps54Q5SPW0 Prr15l-204ENSMUST00000107636 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Vps54Q5SPW0 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Vps54Q5SPW0 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Vps54Q5SPW0 Myt1-202ENSMUST00000108756 5509 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.96
Vps54Q5SPW0 Gm37067-201ENSMUST00000195730 1628 ntBASIC9.02□□□□□ -0.96
Vps54Q5SPW0 Mtif2-201ENSMUST00000020749 2425 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Vps54Q5SPW0 Celf5-204ENSMUST00000120856 3861 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Vps54Q5SPW0 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Vps54Q5SPW0 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Vps54Q5SPW0 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Vps54Q5SPW0 Gm16638-202ENSMUST00000208892 8508 ntTSL 5 BASIC9.02□□□□□ -0.97
Vps54Q5SPW0 Gm18537-202ENSMUST00000206215 1503 ntBASIC9.02□□□□□ -0.97
Vps54Q5SPW0 Gm40055-201ENSMUST00000196091 2742 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Vps54Q5SPW0 Ptprj-201ENSMUST00000111493 7124 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Vps54Q5SPW0 Gm6567-201ENSMUST00000205529 2095 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Vps54Q5SPW0 Gm15586-201ENSMUST00000121218 528 ntBASIC9.02□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms