Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim43aQ3TL54 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim43aQ3TL54 Znhit3-201ENSMUST00000103195 998 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim43aQ3TL54 Tmem91-202ENSMUST00000108404 485 ntTSL 5 BASIC8.03□□□□□ -1.12
Trim43aQ3TL54 Gm8688-201ENSMUST00000118240 969 ntBASIC8.03□□□□□ -1.12
Trim43aQ3TL54 Gm12611-201ENSMUST00000119452 1037 ntBASIC8.03□□□□□ -1.12
Trim43aQ3TL54 Gm15006-201ENSMUST00000121419 1122 ntBASIC8.03□□□□□ -1.12
Trim43aQ3TL54 Gm24899-201ENSMUST00000158892 73 ntBASIC8.03□□□□□ -1.12
Trim43aQ3TL54 Gm7162-201ENSMUST00000161205 1024 ntBASIC8.03□□□□□ -1.12
Trim43aQ3TL54 Gm17051-201ENSMUST00000170787 487 ntBASIC8.03□□□□□ -1.12
Trim43aQ3TL54 Gm26784-201ENSMUST00000181666 410 ntBASIC8.03□□□□□ -1.12
Trim43aQ3TL54 Gm14214-201ENSMUST00000184654 678 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Trim43aQ3TL54 Gm29250-201ENSMUST00000191372 368 ntTSL 5 BASIC8.03□□□□□ -1.12
Trim43aQ3TL54 Tial1-214ENSMUST00000205835 562 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim43aQ3TL54 Gm33926-201ENSMUST00000208755 357 ntTSL 2 BASIC8.03□□□□□ -1.12
Trim43aQ3TL54 Gm45299-201ENSMUST00000210199 420 ntBASIC8.03□□□□□ -1.12
Trim43aQ3TL54 Gm17875-201ENSMUST00000216005 941 ntBASIC8.03□□□□□ -1.12
Trim43aQ3TL54 Gm8058-201ENSMUST00000217247 587 ntBASIC8.03□□□□□ -1.12
Trim43aQ3TL54 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim43aQ3TL54 Rpl7a-ps1-201ENSMUST00000223350 793 ntBASIC8.03□□□□□ -1.12
Trim43aQ3TL54 Capsl-201ENSMUST00000042360 949 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim43aQ3TL54 Serpina3h-201ENSMUST00000049922 1239 ntTSL 5 BASIC8.03□□□□□ -1.12
Trim43aQ3TL54 Gm42898-201ENSMUST00000200370 3073 ntBASIC8.03□□□□□ -1.12
Trim43aQ3TL54 Mettl6-205ENSMUST00000227777 2762 ntAPPRIS ALT2 BASIC8.03□□□□□ -1.12
Trim43aQ3TL54 Dennd6a-203ENSMUST00000224111 2692 ntBASIC8.03□□□□□ -1.12
Trim43aQ3TL54 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim43aQ3TL54 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim43aQ3TL54 Gm42973-201ENSMUST00000197913 3200 ntBASIC8.03□□□□□ -1.12
Trim43aQ3TL54 Sema3d-205ENSMUST00000197927 3207 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim43aQ3TL54 Fam13a-201ENSMUST00000089860 5786 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim43aQ3TL54 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Trim43aQ3TL54 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
Trim43aQ3TL54 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC8.02□□□□□ -1.12
Trim43aQ3TL54 AC154141.1-201ENSMUST00000208403 4136 ntBASIC8.02□□□□□ -1.12
Trim43aQ3TL54 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Olfr1278-205ENSMUST00000215210 6901 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Gm24472-201ENSMUST00000104484 132 ntBASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Gm41-201ENSMUST00000116183 1023 ntBASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Gm14056-201ENSMUST00000117198 642 ntBASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Gm12993-201ENSMUST00000119900 479 ntBASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Gm13622-201ENSMUST00000120658 433 ntBASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Gm11474-201ENSMUST00000120814 277 ntBASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Gm11933-201ENSMUST00000121550 375 ntBASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Snhg12-203ENSMUST00000128131 614 ntTSL 2 BASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Tmsb10-204ENSMUST00000144337 433 ntTSL 2 BASIC8.02□□□□□ -1.13
Trim43aQ3TL54 1700060C16Rik-201ENSMUST00000150559 645 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Gm18970-201ENSMUST00000186040 938 ntBASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Gm28100-201ENSMUST00000186560 582 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Gm8004-201ENSMUST00000187782 617 ntBASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Gm42945-202ENSMUST00000197523 537 ntTSL 2 BASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Gm43805-201ENSMUST00000198488 824 ntBASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Gm42489-201ENSMUST00000198964 669 ntBASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Gm27680-202ENSMUST00000199221 807 ntBASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Gm42952-206ENSMUST00000199324 506 ntTSL 3 BASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Gm20223-201ENSMUST00000199932 805 ntBASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Gm5149-202ENSMUST00000199980 1250 ntTSL 2 BASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Gm18060-201ENSMUST00000207407 564 ntBASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Gm44833-201ENSMUST00000208368 331 ntBASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Gm9249-201ENSMUST00000221420 578 ntBASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Gm46379-201ENSMUST00000222551 265 ntBASIC8.02□□□□□ -1.13
Trim43aQ3TL54 AC165260.5-201ENSMUST00000224640 1247 ntBASIC8.02□□□□□ -1.13
Trim43aQ3TL54 AC124715.1-201ENSMUST00000228480 754 ntBASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Olfr1445-201ENSMUST00000049624 1001 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Olfr1494-201ENSMUST00000051768 948 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Fam83b-202ENSMUST00000183437 3879 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Musk-205ENSMUST00000102893 3323 ntTSL 5 BASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Gm43623-201ENSMUST00000199289 2663 ntBASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Tex52-202ENSMUST00000130785 1424 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Gm15083-201ENSMUST00000138670 1413 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Slc25a5-ps-203ENSMUST00000223928 1442 ntBASIC8.02□□□□□ -1.13
Trim43aQ3TL54 Ptk6-201ENSMUST00000016511 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Gm18957-201ENSMUST00000197623 1813 ntBASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC8.01□□□□□ -1.13
Trim43aQ3TL54 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Gm15154-201ENSMUST00000117590 366 ntBASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Gm15062-201ENSMUST00000120567 367 ntBASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Gm11895-201ENSMUST00000122165 467 ntBASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Gm13828-201ENSMUST00000122278 363 ntBASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Gm10086-201ENSMUST00000136334 354 ntBASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Scarna17-201ENSMUST00000158064 79 ntBASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Gm25770-201ENSMUST00000158566 115 ntBASIC8.01□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 126 ms