Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 1700015F17Rik-201ENSMUST00000115447 710 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cntn3Q07409 Gm16618-201ENSMUST00000134992 955 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Cntn3Q07409 Fam229b-206ENSMUST00000136546 592 ntAPPRIS P1 TSL 3 BASIC8.43□□□□□ -1.06
Cntn3Q07409 Myl2-201ENSMUST00000014080 662 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cntn3Q07409 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC8.43□□□□□ -1.06
Cntn3Q07409 Zfp661-204ENSMUST00000164551 1284 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
Cntn3Q07409 Gm17138-201ENSMUST00000165702 459 ntBASIC8.43□□□□□ -1.06
Cntn3Q07409 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Cntn3Q07409 Gm25690-201ENSMUST00000175439 77 ntBASIC8.43□□□□□ -1.06
Cntn3Q07409 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC8.43□□□□□ -1.06
Cntn3Q07409 Gm44865-201ENSMUST00000207240 531 ntBASIC8.43□□□□□ -1.06
Cntn3Q07409 Gm39121-201ENSMUST00000208847 525 ntBASIC8.43□□□□□ -1.06
Cntn3Q07409 Gm4270-201ENSMUST00000209666 406 ntBASIC8.43□□□□□ -1.06
Cntn3Q07409 Gm30504-203ENSMUST00000209762 1048 ntTSL 5 BASIC8.43□□□□□ -1.06
Cntn3Q07409 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC8.43□□□□□ -1.06
Cntn3Q07409 Gm18619-201ENSMUST00000222722 1147 ntBASIC8.43□□□□□ -1.06
Cntn3Q07409 AC158531.2-201ENSMUST00000224264 473 ntBASIC8.43□□□□□ -1.06
Cntn3Q07409 AC156574.1-201ENSMUST00000227084 452 ntBASIC8.43□□□□□ -1.06
Cntn3Q07409 AC122035.2-201ENSMUST00000228698 462 ntBASIC8.43□□□□□ -1.06
Cntn3Q07409 Dnajc5b-201ENSMUST00000029132 923 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cntn3Q07409 Cd74-201ENSMUST00000050487 1218 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Cntn3Q07409 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cntn3Q07409 4930542C16Rik-201ENSMUST00000062438 1090 ntTSL 2 BASIC8.43□□□□□ -1.06
Cntn3Q07409 Klk1b8-201ENSMUST00000072204 859 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cntn3Q07409 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Cntn3Q07409 Gm10805-201ENSMUST00000099710 399 ntBASIC8.43□□□□□ -1.06
Cntn3Q07409 E330035G20Rik-201ENSMUST00000221094 3002 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Cntn3Q07409 Ipcef1-201ENSMUST00000078070 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cntn3Q07409 Wrn-204ENSMUST00000211498 4856 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Cntn3Q07409 2310001H17Rik-202ENSMUST00000181238 2237 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Cntn3Q07409 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Cntn3Q07409 Gm38661-201ENSMUST00000216555 5814 ntTSL 5 BASIC8.43□□□□□ -1.06
Cntn3Q07409 Dnajc6-203ENSMUST00000106929 5128 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cntn3Q07409 Vmn1r181-202ENSMUST00000226843 4496 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Cntn3Q07409 Pofut1-206ENSMUST00000123487 4143 ntTSL 2 BASIC8.43□□□□□ -1.06
Cntn3Q07409 Gm43162-201ENSMUST00000198292 1770 ntBASIC8.43□□□□□ -1.06
Cntn3Q07409 Nip7-201ENSMUST00000034392 3036 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cntn3Q07409 Glra4-201ENSMUST00000018739 1831 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cntn3Q07409 P2ry4-201ENSMUST00000053373 4434 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cntn3Q07409 Thrb-201ENSMUST00000022303 4532 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Cntn3Q07409 Gem-201ENSMUST00000029868 1994 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
Cntn3Q07409 Pknox2-202ENSMUST00000080754 3431 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cntn3Q07409 Gm18632-201ENSMUST00000222597 2087 ntBASIC8.42□□□□□ -1.06
Cntn3Q07409 Sorbs2-215ENSMUST00000135336 6307 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Cntn3Q07409 Garnl3-202ENSMUST00000102810 3578 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cntn3Q07409 Krr1-203ENSMUST00000163048 5023 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cntn3Q07409 Lyrm9-203ENSMUST00000147875 8035 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cntn3Q07409 Gm37109-201ENSMUST00000195475 2254 ntBASIC8.42□□□□□ -1.06
Cntn3Q07409 Olfr1241-203ENSMUST00000215055 2441 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Cntn3Q07409 Mas1-201ENSMUST00000089015 2401 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cntn3Q07409 Cyp1a1-201ENSMUST00000034865 2621 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cntn3Q07409 Prom1-204ENSMUST00000087442 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cntn3Q07409 4932413F04Rik-201ENSMUST00000190332 2765 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Cntn3Q07409 E330013P04Rik-203ENSMUST00000190698 2996 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Cntn3Q07409 Ssr3-201ENSMUST00000029414 2957 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cntn3Q07409 Acaca-201ENSMUST00000020843 9026 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cntn3Q07409 Srcap-206ENSMUST00000186954 9345 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Cntn3Q07409 Naip1-201ENSMUST00000022142 5464 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cntn3Q07409 Mbd4-201ENSMUST00000032469 3614 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cntn3Q07409 Cd99l2-201ENSMUST00000037391 3600 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cntn3Q07409 Olfr1128-201ENSMUST00000102624 936 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Cntn3Q07409 Mir669p-2-201ENSMUST00000103868 87 ntBASIC8.42□□□□□ -1.06
Cntn3Q07409 Mir669p-1-201ENSMUST00000103884 87 ntBASIC8.42□□□□□ -1.06
Cntn3Q07409 Gm23529-201ENSMUST00000104562 132 ntBASIC8.42□□□□□ -1.06
Cntn3Q07409 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Cntn3Q07409 Gm12460-201ENSMUST00000117147 357 ntBASIC8.42□□□□□ -1.06
Cntn3Q07409 Gm14465-201ENSMUST00000120603 567 ntBASIC8.42□□□□□ -1.06
Cntn3Q07409 Olfr268-ps1-201ENSMUST00000121395 945 ntBASIC8.42□□□□□ -1.06
Cntn3Q07409 B430319H21Rik-201ENSMUST00000123420 734 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Cntn3Q07409 Gm12648-201ENSMUST00000126270 656 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Cntn3Q07409 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cntn3Q07409 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Cntn3Q07409 Gm17235-201ENSMUST00000169128 964 ntBASIC8.42□□□□□ -1.06
Cntn3Q07409 Obox2-203ENSMUST00000174076 782 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Cntn3Q07409 Mir1231-201ENSMUST00000175639 81 ntBASIC8.42□□□□□ -1.06
Cntn3Q07409 2610020F03Rik-201ENSMUST00000180401 588 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Cntn3Q07409 Mlip-212ENSMUST00000184848 1019 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Cntn3Q07409 Gm29356-201ENSMUST00000186935 373 ntBASIC8.42□□□□□ -1.06
Cntn3Q07409 Igkv8-34-201ENSMUST00000196959 365 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Cntn3Q07409 Gm17660-203ENSMUST00000198485 522 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cntn3Q07409 Gm42952-206ENSMUST00000199324 506 ntTSL 3 BASIC8.42□□□□□ -1.06
Cntn3Q07409 Gm9354-201ENSMUST00000209075 468 ntBASIC8.42□□□□□ -1.06
Cntn3Q07409 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC8.42□□□□□ -1.06
Cntn3Q07409 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC8.42□□□□□ -1.06
Cntn3Q07409 Gm18255-201ENSMUST00000211316 765 ntBASIC8.42□□□□□ -1.06
Cntn3Q07409 4930555F03Rik-205ENSMUST00000212179 1257 ntTSL 5 BASIC8.42□□□□□ -1.06
Cntn3Q07409 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Cntn3Q07409 AC127302.1-201ENSMUST00000215973 1111 ntBASIC8.42□□□□□ -1.06
Cntn3Q07409 AC102689.1-201ENSMUST00000220511 1090 ntBASIC8.42□□□□□ -1.06
Cntn3Q07409 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC8.42□□□□□ -1.06
Cntn3Q07409 AC165281.1-201ENSMUST00000225713 1011 ntBASIC8.42□□□□□ -1.06
Cntn3Q07409 AC154806.1-203ENSMUST00000227370 1032 ntBASIC8.42□□□□□ -1.06
Cntn3Q07409 AC167013.3-201ENSMUST00000228110 989 ntBASIC8.42□□□□□ -1.06
Cntn3Q07409 AC137950.1-201ENSMUST00000228553 515 ntBASIC8.42□□□□□ -1.06
Cntn3Q07409 Olfr125-201ENSMUST00000050255 1118 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Cntn3Q07409 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Cntn3Q07409 Gm10155-201ENSMUST00000084598 483 ntBASIC8.42□□□□□ -1.06
Cntn3Q07409 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Cntn3Q07409 Olfr1303-201ENSMUST00000099609 939 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Cntn3Q07409 Gm11870-201ENSMUST00000119255 1322 ntBASIC8.42□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 94.2 ms