Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Msh6P54276 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC9.63□□□□□ -0.87
Msh6P54276 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC9.63□□□□□ -0.87
Msh6P54276 Gm38079-201ENSMUST00000195603 154 ntBASIC9.63□□□□□ -0.87
Msh6P54276 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC9.63□□□□□ -0.87
Msh6P54276 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC9.63□□□□□ -0.87
Msh6P54276 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC9.63□□□□□ -0.87
Msh6P54276 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC9.63□□□□□ -0.87
Msh6P54276 Cryab-203ENSMUST00000214962 846 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Msh6P54276 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Msh6P54276 AC154904.1-201ENSMUST00000219510 312 ntBASIC9.63□□□□□ -0.87
Msh6P54276 AC110176.1-201ENSMUST00000226219 504 ntBASIC9.63□□□□□ -0.87
Msh6P54276 AC123533.2-201ENSMUST00000228176 375 ntBASIC9.63□□□□□ -0.87
Msh6P54276 Serpina3h-201ENSMUST00000049922 1239 ntTSL 5 BASIC9.63□□□□□ -0.87
Msh6P54276 Mir7b-201ENSMUST00000083557 111 ntBASIC9.63□□□□□ -0.87
Msh6P54276 Etl4-203ENSMUST00000114604 4786 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Msh6P54276 9530053A07Rik-204ENSMUST00000150948 7895 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Msh6P54276 B3gnt2-201ENSMUST00000055549 2602 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Msh6P54276 A730085K08Rik-201ENSMUST00000177015 2013 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Msh6P54276 Elmod2-206ENSMUST00000177594 4704 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Msh6P54276 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Msh6P54276 Olfr1361-202ENSMUST00000214321 2792 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Msh6P54276 Pramef20-201ENSMUST00000121109 1434 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Msh6P54276 Tsc1-202ENSMUST00000113867 7682 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Msh6P54276 Tsc1-201ENSMUST00000028155 7674 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Msh6P54276 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC9.63□□□□□ -0.87
Msh6P54276 Gm28469-201ENSMUST00000186374 2166 ntTSL 5 BASIC9.63□□□□□ -0.87
Msh6P54276 Gm28134-201ENSMUST00000188690 2166 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Msh6P54276 Gm37075-201ENSMUST00000191888 2166 ntTSL 5 BASIC9.63□□□□□ -0.87
Msh6P54276 Gm37574-201ENSMUST00000194264 2166 ntTSL 5 BASIC9.63□□□□□ -0.87
Msh6P54276 Ank3-231ENSMUST00000182884 9963 ntAPPRIS P4 TSL 1 (best) BASIC9.63□□□□□ -0.87
Msh6P54276 Nup155-201ENSMUST00000163765 6402 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Msh6P54276 Map3k19-205ENSMUST00000208183 4865 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Msh6P54276 Bdnf-210ENSMUST00000111051 4125 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Msh6P54276 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Msh6P54276 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Msh6P54276 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
Msh6P54276 Stag3-201ENSMUST00000048028 4211 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Msh6P54276 Galnt11-203ENSMUST00000114952 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Msh6P54276 4930565N06Rik-201ENSMUST00000153572 2416 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Msh6P54276 Gm14244-201ENSMUST00000155688 2410 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Msh6P54276 Gm44116-201ENSMUST00000204269 1525 ntBASIC9.63□□□□□ -0.87
Msh6P54276 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
Msh6P54276 E130018O15Rik-201ENSMUST00000069741 3776 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Msh6P54276 Perm1-201ENSMUST00000105572 3901 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Msh6P54276 D830032E09Rik-201ENSMUST00000186875 2193 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Msh6P54276 Hspbap1-201ENSMUST00000023555 4590 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Msh6P54276 BC048644-201ENSMUST00000140928 3522 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Msh6P54276 Npr3-204ENSMUST00000228489 1969 ntBASIC9.63□□□□□ -0.87
Msh6P54276 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC9.63□□□□□ -0.87
Msh6P54276 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC9.63□□□□□ -0.87
Msh6P54276 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC9.63□□□□□ -0.87
Msh6P54276 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
Msh6P54276 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Msh6P54276 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC9.63□□□□□ -0.87
Msh6P54276 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC9.63□□□□□ -0.87
Msh6P54276 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC9.63□□□□□ -0.87
Msh6P54276 Gm43396-201ENSMUST00000197506 706 ntBASIC9.63□□□□□ -0.87
Msh6P54276 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC9.63□□□□□ -0.87
Msh6P54276 Gm45506-201ENSMUST00000211620 280 ntBASIC9.63□□□□□ -0.87
Msh6P54276 AC144783.1-201ENSMUST00000219103 960 ntBASIC9.63□□□□□ -0.87
Msh6P54276 AC133958.1-201ENSMUST00000227085 961 ntBASIC9.63□□□□□ -0.87
Msh6P54276 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Msh6P54276 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Msh6P54276 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Msh6P54276 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC9.63□□□□□ -0.87
Msh6P54276 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC9.63□□□□□ -0.87
Msh6P54276 Gm44117-201ENSMUST00000204442 1758 ntBASIC9.62□□□□□ -0.87
Msh6P54276 Uggt1-201ENSMUST00000046875 9033 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Msh6P54276 Prpf4b-201ENSMUST00000077853 7844 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Msh6P54276 Wdfy4-202ENSMUST00000130509 10158 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Msh6P54276 Gm37877-201ENSMUST00000191630 2709 ntBASIC9.62□□□□□ -0.87
Msh6P54276 Mybbp1a-201ENSMUST00000045633 4358 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Msh6P54276 C87436-203ENSMUST00000113700 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Msh6P54276 Olfr212-201ENSMUST00000075756 2672 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Msh6P54276 Mapre2-209ENSMUST00000170802 3936 ntAPPRIS ALT1 TSL 5 BASIC9.62□□□□□ -0.87
Msh6P54276 Rnmt-201ENSMUST00000009679 5008 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Msh6P54276 Snrnp200-201ENSMUST00000103220 6745 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Msh6P54276 Klhl5-205ENSMUST00000204348 3380 ntTSL 5 BASIC9.62□□□□□ -0.87
Msh6P54276 Gm38315-201ENSMUST00000194286 2437 ntBASIC9.62□□□□□ -0.87
Msh6P54276 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Msh6P54276 Gm38288-201ENSMUST00000195330 1320 ntBASIC9.62□□□□□ -0.87
Msh6P54276 Dock9-206ENSMUST00000212181 7368 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Msh6P54276 Klhl32-203ENSMUST00000108214 5970 ntTSL 5 BASIC9.62□□□□□ -0.87
Msh6P54276 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Msh6P54276 Chrnb4-201ENSMUST00000034854 3723 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Msh6P54276 C1qtnf7-201ENSMUST00000076939 3879 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Msh6P54276 Hip1-201ENSMUST00000060311 7835 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Msh6P54276 Gm23437-201ENSMUST00000104036 127 ntBASIC9.62□□□□□ -0.87
Msh6P54276 Gm12174-201ENSMUST00000119853 813 ntBASIC9.62□□□□□ -0.87
Msh6P54276 Gm23139-201ENSMUST00000179454 132 ntBASIC9.62□□□□□ -0.87
Msh6P54276 Mir6403-201ENSMUST00000185007 129 ntBASIC9.62□□□□□ -0.87
Msh6P54276 Gm29369-201ENSMUST00000190674 615 ntBASIC9.62□□□□□ -0.87
Msh6P54276 Gm8182-201ENSMUST00000197863 769 ntBASIC9.62□□□□□ -0.87
Msh6P54276 Gm10652-201ENSMUST00000199790 2622 ntBASIC9.62□□□□□ -0.87
Msh6P54276 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC9.62□□□□□ -0.87
Msh6P54276 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC9.62□□□□□ -0.87
Msh6P54276 Olfr686-204ENSMUST00000216613 2613 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Msh6P54276 Nqo2-204ENSMUST00000222740 995 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Msh6P54276 Dyrk1a-201ENSMUST00000023614 5754 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms