Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 AC164978.1-201ENSMUST00000228608 4011 ntBASIC7.73□□□□□ -1.17
Atxn1P54254 Ppp2r3a-202ENSMUST00000075941 6786 ntTSL 5 BASIC7.73□□□□□ -1.17
Atxn1P54254 Gm3269-201ENSMUST00000166025 1758 ntAPPRIS P5 TSL 5 BASIC7.73□□□□□ -1.17
Atxn1P54254 Gm42874-201ENSMUST00000198888 1774 ntBASIC7.73□□□□□ -1.17
Atxn1P54254 Cyp2c29-201ENSMUST00000003137 1783 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Atxn1P54254 AW209491-201ENSMUST00000038690 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Atxn1P54254 Slc26a9-201ENSMUST00000049027 4739 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Atxn1P54254 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Atxn1P54254 Supt20-203ENSMUST00000197502 2751 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Atxn1P54254 Retreg1-203ENSMUST00000226438 2783 ntBASIC7.73□□□□□ -1.17
Atxn1P54254 Gm11868-201ENSMUST00000121594 1478 ntBASIC7.73□□□□□ -1.17
Atxn1P54254 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Atxn1P54254 Gm28704-201ENSMUST00000186589 2169 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Atxn1P54254 Gm29636-201ENSMUST00000188149 2169 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Atxn1P54254 Rnf141-209ENSMUST00000177236 4032 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Atxn1P54254 Tnni3k-201ENSMUST00000064076 3034 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Atxn1P54254 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC7.73□□□□□ -1.17
Atxn1P54254 Sox6-212ENSMUST00000206369 2863 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Atxn1P54254 Bbx-208ENSMUST00000138166 8743 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
Atxn1P54254 Sidt1-204ENSMUST00000127567 2901 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Atxn1P54254 A930030B08Rik-201ENSMUST00000207625 3965 ntBASIC7.72□□□□□ -1.17
Atxn1P54254 Sox2ot-215ENSMUST00000199171 3486 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Atxn1P54254 Gm45477-201ENSMUST00000200213 5498 ntBASIC7.72□□□□□ -1.17
Atxn1P54254 Ogdhl-203ENSMUST00000228529 3723 ntAPPRIS ALT2 BASIC7.72□□□□□ -1.17
Atxn1P54254 Gpm6b-203ENSMUST00000112224 4644 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Atxn1P54254 Sla-205ENSMUST00000168589 1412 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
Atxn1P54254 4930503L19Rik-207ENSMUST00000212982 1415 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Atxn1P54254 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC7.72□□□□□ -1.17
Atxn1P54254 Fkbp14-201ENSMUST00000046520 2694 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Atxn1P54254 Depdc5-205ENSMUST00000120902 5195 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Atxn1P54254 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Atxn1P54254 Gm42930-201ENSMUST00000200872 3260 ntBASIC7.72□□□□□ -1.17
Atxn1P54254 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC7.72□□□□□ -1.17
Atxn1P54254 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC7.72□□□□□ -1.17
Atxn1P54254 Amelx-203ENSMUST00000112119 841 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Atxn1P54254 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
Atxn1P54254 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Atxn1P54254 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC7.72□□□□□ -1.17
Atxn1P54254 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Atxn1P54254 Gm24057-201ENSMUST00000158616 302 ntBASIC7.72□□□□□ -1.17
Atxn1P54254 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Atxn1P54254 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Atxn1P54254 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC7.72□□□□□ -1.17
Atxn1P54254 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC7.72□□□□□ -1.17
Atxn1P54254 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC7.72□□□□□ -1.17
Atxn1P54254 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC7.72□□□□□ -1.17
Atxn1P54254 Gm27034-201ENSMUST00000182552 940 ntBASIC7.72□□□□□ -1.17
Atxn1P54254 Gm26929-201ENSMUST00000182703 753 ntBASIC7.72□□□□□ -1.17
Atxn1P54254 1700030O20Rik-201ENSMUST00000185546 594 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Atxn1P54254 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC7.72□□□□□ -1.17
Atxn1P54254 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC7.72□□□□□ -1.17
Atxn1P54254 Gm6558-203ENSMUST00000195395 612 ntTSL 5 BASIC7.72□□□□□ -1.17
Atxn1P54254 Gm42429-201ENSMUST00000198579 558 ntBASIC7.72□□□□□ -1.17
Atxn1P54254 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC7.72□□□□□ -1.17
Atxn1P54254 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC7.72□□□□□ -1.17
Atxn1P54254 AC164883.2-201ENSMUST00000227931 3815 ntBASIC7.72□□□□□ -1.17
Atxn1P54254 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Atxn1P54254 Prh1-201ENSMUST00000074042 819 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Atxn1P54254 Rps6-ps1-201ENSMUST00000074205 750 ntBASIC7.72□□□□□ -1.17
Atxn1P54254 n-R5s41-201ENSMUST00000083025 119 ntBASIC7.72□□□□□ -1.17
Atxn1P54254 Mir135b-201ENSMUST00000083501 97 ntBASIC7.72□□□□□ -1.17
Atxn1P54254 Atp6v0a1-202ENSMUST00000092663 3813 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Atxn1P54254 Gcnt2-201ENSMUST00000067778 4038 ntAPPRIS P5 TSL 1 (best) BASIC7.72□□□□□ -1.17
Atxn1P54254 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Atxn1P54254 Eya3-203ENSMUST00000081726 5160 ntAPPRIS P4 TSL 1 (best) BASIC7.72□□□□□ -1.17
Atxn1P54254 Olfr314-202ENSMUST00000205189 2647 ntAPPRIS P1 TSL 3 BASIC7.72□□□□□ -1.17
Atxn1P54254 Olfr156-204ENSMUST00000215406 1850 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Atxn1P54254 Mx1-201ENSMUST00000023655 3385 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Atxn1P54254 Gm26629-201ENSMUST00000180848 2276 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Atxn1P54254 Kidins220-210ENSMUST00000222941 6277 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Atxn1P54254 Syne1-202ENSMUST00000095899 3443 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Atxn1P54254 Cntn5-205ENSMUST00000179049 2682 ntTSL 5 BASIC7.72□□□□□ -1.17
Atxn1P54254 Calb1-201ENSMUST00000029876 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Atxn1P54254 Harbi1-205ENSMUST00000142692 3686 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Atxn1P54254 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Atxn1P54254 Akap2-205ENSMUST00000102903 6650 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Atxn1P54254 Magea5-201ENSMUST00000069556 1360 ntAPPRIS P1 TSL 3 BASIC7.71□□□□□ -1.17
Atxn1P54254 Pramef17-201ENSMUST00000105762 1753 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
Atxn1P54254 Adgrl2-220ENSMUST00000200543 5509 ntAPPRIS ALT1 TSL 5 BASIC7.71□□□□□ -1.17
Atxn1P54254 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
Atxn1P54254 Parp9-201ENSMUST00000023622 2973 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Atxn1P54254 Abcc1-201ENSMUST00000100167 6792 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Atxn1P54254 Itgb6-202ENSMUST00000059888 4806 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Atxn1P54254 Gm10600-201ENSMUST00000117202 2047 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
Atxn1P54254 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Atxn1P54254 Gm17076-201ENSMUST00000165185 1401 ntBASIC7.71□□□□□ -1.17
Atxn1P54254 Gm3608-201ENSMUST00000086725 2858 ntBASIC7.71□□□□□ -1.17
Atxn1P54254 St8sia4-201ENSMUST00000043336 5390 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Atxn1P54254 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.17
Atxn1P54254 Mroh4-202ENSMUST00000137963 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Atxn1P54254 Klhl5-205ENSMUST00000204348 3380 ntTSL 5 BASIC7.71□□□□□ -1.18
Atxn1P54254 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
Atxn1P54254 Churc1-202ENSMUST00000110399 535 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Atxn1P54254 Vma21-203ENSMUST00000114577 4652 ntTSL 3 BASIC7.71□□□□□ -1.18
Atxn1P54254 Cep41-202ENSMUST00000115130 485 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Atxn1P54254 Gm14328-201ENSMUST00000122178 408 ntBASIC7.71□□□□□ -1.18
Atxn1P54254 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Atxn1P54254 Gm8164-201ENSMUST00000169120 1192 ntBASIC7.71□□□□□ -1.18
Atxn1P54254 Vmn2r-ps60-201ENSMUST00000173296 897 ntBASIC7.71□□□□□ -1.18
Atxn1P54254 Gm27435-201ENSMUST00000183588 88 ntBASIC7.71□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms