Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
VhlP40338 Atf2-201ENSMUST00000055833 4210 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
VhlP40338 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
VhlP40338 Gm2654-201ENSMUST00000221381 1592 ntBASIC6.2□□□□□ -1.42
VhlP40338 Entpd3-201ENSMUST00000047687 3453 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VhlP40338 Gm16429-201ENSMUST00000179824 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VhlP40338 Gm26512-201ENSMUST00000181874 3042 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
VhlP40338 Gm24938-201ENSMUST00000102225 110 ntBASIC6.2□□□□□ -1.42
VhlP40338 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC6.2□□□□□ -1.42
VhlP40338 Gm24257-201ENSMUST00000104472 131 ntBASIC6.2□□□□□ -1.42
VhlP40338 Gm15355-201ENSMUST00000118929 285 ntBASIC6.2□□□□□ -1.42
VhlP40338 Gm15941-204ENSMUST00000135401 726 ntTSL 3 BASIC6.2□□□□□ -1.42
VhlP40338 Scarna17-201ENSMUST00000158064 79 ntBASIC6.2□□□□□ -1.42
VhlP40338 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC6.2□□□□□ -1.42
VhlP40338 6530403H02Rik-201ENSMUST00000182099 402 ntTSL 3 BASIC6.2□□□□□ -1.42
VhlP40338 Gm19872-201ENSMUST00000183446 687 ntTSL 2 BASIC6.2□□□□□ -1.42
VhlP40338 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC6.2□□□□□ -1.42
VhlP40338 Gm6750-201ENSMUST00000189273 268 ntBASIC6.2□□□□□ -1.42
VhlP40338 Gm29250-201ENSMUST00000191372 368 ntTSL 5 BASIC6.2□□□□□ -1.42
VhlP40338 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
VhlP40338 Gm37623-201ENSMUST00000193691 803 ntTSL 3 BASIC6.2□□□□□ -1.42
VhlP40338 4933403L11Rik-201ENSMUST00000193857 1121 ntBASIC6.2□□□□□ -1.42
VhlP40338 Gm43539-201ENSMUST00000196190 363 ntTSL 3 BASIC6.2□□□□□ -1.42
VhlP40338 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC6.2□□□□□ -1.42
VhlP40338 Gm43310-201ENSMUST00000198975 820 ntBASIC6.2□□□□□ -1.42
VhlP40338 Gm27680-202ENSMUST00000199221 807 ntBASIC6.2□□□□□ -1.42
VhlP40338 2510016D11Rik-201ENSMUST00000201971 985 ntBASIC6.2□□□□□ -1.42
VhlP40338 Gm16273-201ENSMUST00000202238 268 ntBASIC6.2□□□□□ -1.42
VhlP40338 Mypopos-204ENSMUST00000206381 473 ntTSL 2 BASIC6.2□□□□□ -1.42
VhlP40338 Gm45625-201ENSMUST00000209412 650 ntTSL 5 BASIC6.2□□□□□ -1.42
VhlP40338 Gm45338-205ENSMUST00000210795 728 ntTSL 5 BASIC6.2□□□□□ -1.42
VhlP40338 Gm45454-201ENSMUST00000211484 455 ntBASIC6.2□□□□□ -1.42
VhlP40338 5033426E14Rik-201ENSMUST00000212462 783 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
VhlP40338 AC142407.1-201ENSMUST00000214371 494 ntTSL 5 BASIC6.2□□□□□ -1.42
VhlP40338 Gm17875-201ENSMUST00000216005 941 ntBASIC6.2□□□□□ -1.42
VhlP40338 AC192091.1-201ENSMUST00000218668 439 ntBASIC6.2□□□□□ -1.42
VhlP40338 AC132384.1-201ENSMUST00000219908 1195 ntBASIC6.2□□□□□ -1.42
VhlP40338 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC6.2□□□□□ -1.42
VhlP40338 Gm46379-201ENSMUST00000222551 265 ntBASIC6.2□□□□□ -1.42
VhlP40338 AL844586.1-201ENSMUST00000224297 1042 ntBASIC6.2□□□□□ -1.42
VhlP40338 AC162940.1-201ENSMUST00000224745 1167 ntBASIC6.2□□□□□ -1.42
VhlP40338 Krtap7-1-201ENSMUST00000056118 620 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
VhlP40338 Gm8394-201ENSMUST00000079684 952 ntBASIC6.2□□□□□ -1.42
VhlP40338 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VhlP40338 4933416E14Rik-202ENSMUST00000137955 1938 ntBASIC6.2□□□□□ -1.42
VhlP40338 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
VhlP40338 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
VhlP40338 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
VhlP40338 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
VhlP40338 AC153143.1-201ENSMUST00000222966 1340 ntBASIC6.2□□□□□ -1.42
VhlP40338 1700011H14Rik-201ENSMUST00000022398 1349 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
VhlP40338 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VhlP40338 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VhlP40338 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC6.2□□□□□ -1.42
VhlP40338 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VhlP40338 Zbtb26-202ENSMUST00000102789 2047 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
VhlP40338 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
VhlP40338 Ankef1-202ENSMUST00000121717 2875 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VhlP40338 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
VhlP40338 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VhlP40338 Gm11853-201ENSMUST00000119687 1384 ntBASIC6.19□□□□□ -1.42
VhlP40338 9630002D21Rik-201ENSMUST00000221128 1351 ntTSL 5 BASIC6.19□□□□□ -1.42
VhlP40338 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VhlP40338 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
VhlP40338 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VhlP40338 Malat1-201ENSMUST00000172812 6983 ntBASIC6.19□□□□□ -1.42
VhlP40338 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VhlP40338 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VhlP40338 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VhlP40338 4930443O20Rik-201ENSMUST00000135659 1443 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VhlP40338 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
VhlP40338 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
VhlP40338 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
VhlP40338 Lppos-201ENSMUST00000181640 1603 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VhlP40338 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VhlP40338 Rnf170-203ENSMUST00000110575 966 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VhlP40338 Gm11241-201ENSMUST00000117371 896 ntBASIC6.19□□□□□ -1.42
VhlP40338 Gm12072-201ENSMUST00000118293 715 ntBASIC6.19□□□□□ -1.42
VhlP40338 Gm11474-201ENSMUST00000120814 277 ntBASIC6.19□□□□□ -1.42
VhlP40338 Cul1-203ENSMUST00000143941 530 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VhlP40338 Tmsb10-204ENSMUST00000144337 433 ntTSL 2 BASIC6.19□□□□□ -1.42
VhlP40338 A530010F05Rik-201ENSMUST00000146845 1020 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VhlP40338 Gm13872-203ENSMUST00000147082 657 ntTSL 3 BASIC6.19□□□□□ -1.42
VhlP40338 Samd13-204ENSMUST00000147113 729 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
VhlP40338 Gm20257-201ENSMUST00000185352 936 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VhlP40338 Gm5857-201ENSMUST00000198953 493 ntBASIC6.19□□□□□ -1.42
VhlP40338 Gm42556-201ENSMUST00000201397 607 ntTSL 3 BASIC6.19□□□□□ -1.42
VhlP40338 Ceacam1-204ENSMUST00000205308 993 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VhlP40338 Gm45432-201ENSMUST00000210391 416 ntBASIC6.19□□□□□ -1.42
VhlP40338 Gm34597-201ENSMUST00000211189 633 ntTSL 5 BASIC6.19□□□□□ -1.42
VhlP40338 Gm7368-201ENSMUST00000213307 367 ntBASIC6.19□□□□□ -1.42
VhlP40338 Gm35501-202ENSMUST00000215101 459 ntTSL 3 BASIC6.19□□□□□ -1.42
VhlP40338 2900045O20Rik-201ENSMUST00000218374 1292 ntTSL 2 BASIC6.19□□□□□ -1.42
VhlP40338 AC163041.2-201ENSMUST00000223082 573 ntBASIC6.19□□□□□ -1.42
VhlP40338 Rpl7a-ps1-201ENSMUST00000223350 793 ntBASIC6.19□□□□□ -1.42
VhlP40338 AC154687.1-201ENSMUST00000224875 677 ntBASIC6.19□□□□□ -1.42
VhlP40338 Bdh2-201ENSMUST00000029817 1059 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VhlP40338 1700018F24Rik-201ENSMUST00000031624 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VhlP40338 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VhlP40338 Hpf1-201ENSMUST00000037190 1191 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms