Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Spata1-202ENSMUST00000093951 2712 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Traf1P39428 Gm7337-202ENSMUST00000181439 2655 ntBASIC8.91□□□□□ -0.98
Traf1P39428 Ptpn13-201ENSMUST00000048957 7915 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
Traf1P39428 Akt3-203ENSMUST00000111160 4735 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Traf1P39428 Gm11934-201ENSMUST00000132553 1536 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Traf1P39428 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Traf1P39428 Fbxw10-201ENSMUST00000036085 3354 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Traf1P39428 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Traf1P39428 Gm45534-201ENSMUST00000211449 2339 ntBASIC8.91□□□□□ -0.98
Traf1P39428 Ctnnd1-208ENSMUST00000111677 5789 ntTSL 5 BASIC8.91□□□□□ -0.98
Traf1P39428 n-R5s1-201ENSMUST00000101925 119 ntBASIC8.91□□□□□ -0.98
Traf1P39428 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC8.91□□□□□ -0.98
Traf1P39428 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Traf1P39428 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC8.91□□□□□ -0.98
Traf1P39428 Platr14-205ENSMUST00000146553 770 ntTSL 2 BASIC8.91□□□□□ -0.98
Traf1P39428 Gm6004-201ENSMUST00000173237 1116 ntBASIC8.91□□□□□ -0.98
Traf1P39428 Mir8097-201ENSMUST00000185150 119 ntBASIC8.91□□□□□ -0.98
Traf1P39428 Gm2287-201ENSMUST00000197417 1084 ntBASIC8.91□□□□□ -0.98
Traf1P39428 Gm43542-201ENSMUST00000199505 379 ntBASIC8.91□□□□□ -0.98
Traf1P39428 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Traf1P39428 Gm46124-202ENSMUST00000217260 860 ntTSL 5 BASIC8.91□□□□□ -0.98
Traf1P39428 AC125019.1-201ENSMUST00000224809 908 ntBASIC8.91□□□□□ -0.98
Traf1P39428 Cst11-201ENSMUST00000028934 615 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Traf1P39428 Ift122-202ENSMUST00000112923 3765 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Traf1P39428 Gm42679-201ENSMUST00000197086 2906 ntBASIC8.91□□□□□ -0.98
Traf1P39428 Gm11855-201ENSMUST00000121562 1869 ntBASIC8.91□□□□□ -0.98
Traf1P39428 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC8.91□□□□□ -0.98
Traf1P39428 Golga3-201ENSMUST00000031477 4805 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Traf1P39428 A130012E19Rik-201ENSMUST00000218674 3135 ntBASIC8.91□□□□□ -0.98
Traf1P39428 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Traf1P39428 Tcp10a-201ENSMUST00000095726 2442 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Traf1P39428 Zcchc6-201ENSMUST00000071703 5869 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Traf1P39428 Mmp27-201ENSMUST00000120900 1662 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Traf1P39428 Gm37902-201ENSMUST00000192839 1683 ntBASIC8.91□□□□□ -0.98
Traf1P39428 Dglucy-208ENSMUST00000167322 2941 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Traf1P39428 Gm26813-201ENSMUST00000180778 3587 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Traf1P39428 Extl2-203ENSMUST00000106502 2840 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Traf1P39428 Acad11-201ENSMUST00000047799 3444 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Traf1P39428 Gm7972-203ENSMUST00000209180 2184 ntTSL 3 BASIC8.9□□□□□ -0.98
Traf1P39428 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Traf1P39428 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC8.9□□□□□ -0.98
Traf1P39428 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Traf1P39428 Ftmt-201ENSMUST00000025388 1451 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Traf1P39428 Dlg2-203ENSMUST00000107193 4910 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Traf1P39428 Gm43507-202ENSMUST00000200281 2011 ntTSL 5 BASIC8.9□□□□□ -0.98
Traf1P39428 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Traf1P39428 AC166159.1-201ENSMUST00000227154 1380 ntBASIC8.9□□□□□ -0.98
Traf1P39428 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Traf1P39428 Gm6350-201ENSMUST00000195099 1339 ntBASIC8.9□□□□□ -0.98
Traf1P39428 Abcb11-204ENSMUST00000180142 4963 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Traf1P39428 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Traf1P39428 Gm25083-201ENSMUST00000102319 92 ntBASIC8.9□□□□□ -0.98
Traf1P39428 Gm22439-201ENSMUST00000104048 132 ntBASIC8.9□□□□□ -0.98
Traf1P39428 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Traf1P39428 4930555O08Rik-201ENSMUST00000122821 668 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Traf1P39428 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC8.9□□□□□ -0.98
Traf1P39428 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Traf1P39428 1700123O12Rik-202ENSMUST00000141312 660 ntTSL 3 BASIC8.9□□□□□ -0.98
Traf1P39428 Gm14664-201ENSMUST00000142919 437 ntTSL 3 BASIC8.9□□□□□ -0.98
Traf1P39428 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Traf1P39428 Gm7502-201ENSMUST00000169235 733 ntBASIC8.9□□□□□ -0.98
Traf1P39428 Gm25692-201ENSMUST00000175444 125 ntBASIC8.9□□□□□ -0.98
Traf1P39428 Gm7763-201ENSMUST00000182220 1006 ntBASIC8.9□□□□□ -0.98
Traf1P39428 Gm5327-201ENSMUST00000182864 1009 ntBASIC8.9□□□□□ -0.98
Traf1P39428 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC8.9□□□□□ -0.98
Traf1P39428 Thyn1-203ENSMUST00000213770 775 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Traf1P39428 Gm40853-201ENSMUST00000221342 582 ntBASIC8.9□□□□□ -0.98
Traf1P39428 Gm9255-201ENSMUST00000223225 581 ntBASIC8.9□□□□□ -0.98
Traf1P39428 AC154785.1-201ENSMUST00000223280 572 ntBASIC8.9□□□□□ -0.98
Traf1P39428 AC165287.1-201ENSMUST00000224985 178 ntBASIC8.9□□□□□ -0.98
Traf1P39428 AC152940.1-201ENSMUST00000226504 139 ntBASIC8.9□□□□□ -0.98
Traf1P39428 AC125539.1-201ENSMUST00000227423 622 ntBASIC8.9□□□□□ -0.98
Traf1P39428 Chn1-201ENSMUST00000070579 1023 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Traf1P39428 Alox5ap-201ENSMUST00000071130 1251 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Traf1P39428 Amy1-202ENSMUST00000106540 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Traf1P39428 Liph-201ENSMUST00000060673 3793 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Traf1P39428 Gm28395-201ENSMUST00000187794 2168 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Traf1P39428 Gm28571-201ENSMUST00000188922 2168 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Traf1P39428 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Traf1P39428 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC8.9□□□□□ -0.99
Traf1P39428 Gm45634-201ENSMUST00000209736 1990 ntBASIC8.9□□□□□ -0.99
Traf1P39428 Olfr1006-201ENSMUST00000099917 1529 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.99
Traf1P39428 Gabra1-205ENSMUST00000205546 4045 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Traf1P39428 Gm43519-201ENSMUST00000197239 1872 ntBASIC8.89□□□□□ -0.99
Traf1P39428 Pik3r4-201ENSMUST00000065778 4711 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Traf1P39428 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC8.89□□□□□ -0.99
Traf1P39428 Gm28906-201ENSMUST00000191371 1779 ntBASIC8.89□□□□□ -0.99
Traf1P39428 Gm31267-201ENSMUST00000218941 1397 ntTSL 3 BASIC8.89□□□□□ -0.99
Traf1P39428 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Traf1P39428 Ogfod1-201ENSMUST00000060632 5214 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Traf1P39428 Gm43515-201ENSMUST00000197930 2141 ntBASIC8.89□□□□□ -0.99
Traf1P39428 Tmem161b-206ENSMUST00000225069 2414 ntBASIC8.89□□□□□ -0.99
Traf1P39428 Ryr2-202ENSMUST00000170156 16813 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Traf1P39428 Ryr2-201ENSMUST00000021750 16814 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Traf1P39428 Morc2a-202ENSMUST00000096441 4594 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Traf1P39428 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Traf1P39428 Gm12024-201ENSMUST00000118819 1253 ntBASIC8.89□□□□□ -0.99
Traf1P39428 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Traf1P39428 Gm23392-201ENSMUST00000157580 113 ntBASIC8.89□□□□□ -0.99
Traf1P39428 Gm16540-201ENSMUST00000160263 426 ntTSL 5 BASIC8.89□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms