Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx1P18111 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Cdx1P18111 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx1P18111 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx1P18111 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx1P18111 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx1P18111 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx1P18111 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx1P18111 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx1P18111 Gm12883-201ENSMUST00000117867 364 ntBASIC6.2□□□□□ -1.42
Cdx1P18111 Gm11220-201ENSMUST00000118844 475 ntBASIC6.2□□□□□ -1.42
Cdx1P18111 Gm5390-201ENSMUST00000119069 1230 ntBASIC6.2□□□□□ -1.42
Cdx1P18111 Gm12124-201ENSMUST00000120504 679 ntBASIC6.2□□□□□ -1.42
Cdx1P18111 Gm8778-201ENSMUST00000127246 1107 ntBASIC6.2□□□□□ -1.42
Cdx1P18111 A930104D05Rik-201ENSMUST00000128601 939 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx1P18111 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx1P18111 Scamp1-204ENSMUST00000153558 1255 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx1P18111 Fcor-201ENSMUST00000159364 392 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx1P18111 A230009B12Rik-201ENSMUST00000159422 898 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx1P18111 Krr1-204ENSMUST00000174653 972 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Cdx1P18111 Mir5623-201ENSMUST00000176631 70 ntBASIC6.2□□□□□ -1.42
Cdx1P18111 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC6.2□□□□□ -1.42
Cdx1P18111 Gm37432-201ENSMUST00000195294 341 ntTSL 2 BASIC6.2□□□□□ -1.42
Cdx1P18111 Gm43394-201ENSMUST00000198671 694 ntBASIC6.2□□□□□ -1.42
Cdx1P18111 9530013L04Rik-201ENSMUST00000203393 782 ntBASIC6.2□□□□□ -1.42
Cdx1P18111 Speer9-ps1-201ENSMUST00000203447 775 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx1P18111 Gm44862-201ENSMUST00000207981 1055 ntBASIC6.2□□□□□ -1.42
Cdx1P18111 Gm5609-201ENSMUST00000210008 1267 ntBASIC6.2□□□□□ -1.42
Cdx1P18111 Gm45900-201ENSMUST00000211879 409 ntBASIC6.2□□□□□ -1.42
Cdx1P18111 AC160112.1-201ENSMUST00000219139 714 ntBASIC6.2□□□□□ -1.42
Cdx1P18111 Gm7762-201ENSMUST00000220595 604 ntTSL 3 BASIC6.2□□□□□ -1.42
Cdx1P18111 AC165254.1-203ENSMUST00000222925 574 ntTSL 3 BASIC6.2□□□□□ -1.42
Cdx1P18111 AC116487.1-201ENSMUST00000227033 339 ntBASIC6.2□□□□□ -1.42
Cdx1P18111 Apoa2-201ENSMUST00000005824 492 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx1P18111 Rps7-201ENSMUST00000074267 954 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx1P18111 Gm9761-201ENSMUST00000075650 492 ntBASIC6.2□□□□□ -1.42
Cdx1P18111 Defa30-201ENSMUST00000098898 398 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx1P18111 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx1P18111 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC6.2□□□□□ -1.42
Cdx1P18111 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx1P18111 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Cdx1P18111 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC6.2□□□□□ -1.42
Cdx1P18111 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx1P18111 AC158988.1-201ENSMUST00000226731 2624 ntBASIC6.2□□□□□ -1.42
Cdx1P18111 Ift46-202ENSMUST00000118186 1317 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx1P18111 Arhgap6-202ENSMUST00000087016 1310 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx1P18111 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx1P18111 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC6.2□□□□□ -1.42
Cdx1P18111 Gm17130-201ENSMUST00000201542 2683 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx1P18111 Gm4806-201ENSMUST00000222704 1690 ntBASIC6.2□□□□□ -1.42
Cdx1P18111 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx1P18111 Olfr1006-201ENSMUST00000099917 1529 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
Cdx1P18111 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Cdx1P18111 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cdx1P18111 Gm8605-201ENSMUST00000221619 1370 ntBASIC6.19□□□□□ -1.42
Cdx1P18111 CT010465.1-202ENSMUST00000221816 1355 ntTSL 5 BASIC6.19□□□□□ -1.42
Cdx1P18111 AC107742.1-201ENSMUST00000227769 1390 ntBASIC6.19□□□□□ -1.42
Cdx1P18111 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdx1P18111 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdx1P18111 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cdx1P18111 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC6.19□□□□□ -1.42
Cdx1P18111 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdx1P18111 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC6.19□□□□□ -1.42
Cdx1P18111 Gm7203-201ENSMUST00000210880 1404 ntBASIC6.19□□□□□ -1.42
Cdx1P18111 Gm37914-201ENSMUST00000195317 2679 ntBASIC6.19□□□□□ -1.42
Cdx1P18111 9230112J17Rik-201ENSMUST00000216749 2333 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cdx1P18111 Rps19-ps2-201ENSMUST00000100614 438 ntBASIC6.19□□□□□ -1.42
Cdx1P18111 Gm24665-201ENSMUST00000104160 129 ntBASIC6.19□□□□□ -1.42
Cdx1P18111 Parp11-204ENSMUST00000112195 733 ntTSL 3 BASIC6.19□□□□□ -1.42
Cdx1P18111 Gm41-201ENSMUST00000116183 1023 ntBASIC6.19□□□□□ -1.42
Cdx1P18111 Gm15516-201ENSMUST00000117292 193 ntBASIC6.19□□□□□ -1.42
Cdx1P18111 Gm12385-201ENSMUST00000117439 795 ntBASIC6.19□□□□□ -1.42
Cdx1P18111 Gm14648-201ENSMUST00000119328 483 ntBASIC6.19□□□□□ -1.42
Cdx1P18111 Gm5742-201ENSMUST00000120764 505 ntBASIC6.19□□□□□ -1.42
Cdx1P18111 Rpl21-ps15-201ENSMUST00000121545 483 ntBASIC6.19□□□□□ -1.42
Cdx1P18111 Gm11838-201ENSMUST00000121999 231 ntBASIC6.19□□□□□ -1.42
Cdx1P18111 Crem-209ENSMUST00000129435 1160 ntTSL 5 BASIC6.19□□□□□ -1.42
Cdx1P18111 Gm12594-201ENSMUST00000132140 499 ntTSL 3 BASIC6.19□□□□□ -1.42
Cdx1P18111 Gm26407-201ENSMUST00000158504 307 ntBASIC6.19□□□□□ -1.42
Cdx1P18111 Rps19-ps1-201ENSMUST00000168472 438 ntBASIC6.19□□□□□ -1.42
Cdx1P18111 Gm21762-201ENSMUST00000177561 456 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Cdx1P18111 Gm20765-201ENSMUST00000177792 795 ntAPPRIS P2 BASIC6.19□□□□□ -1.42
Cdx1P18111 Gm21312-201ENSMUST00000179258 795 ntAPPRIS P2 BASIC6.19□□□□□ -1.42
Cdx1P18111 Rps19-ps5-201ENSMUST00000180745 403 ntBASIC6.19□□□□□ -1.42
Cdx1P18111 Rps19-ps6-201ENSMUST00000181233 438 ntBASIC6.19□□□□□ -1.42
Cdx1P18111 Gm6931-201ENSMUST00000183103 371 ntBASIC6.19□□□□□ -1.42
Cdx1P18111 Gm29144-201ENSMUST00000189235 339 ntBASIC6.19□□□□□ -1.42
Cdx1P18111 Gm29238-201ENSMUST00000189709 695 ntBASIC6.19□□□□□ -1.42
Cdx1P18111 Gm28607-201ENSMUST00000190142 339 ntBASIC6.19□□□□□ -1.42
Cdx1P18111 Gm28121-201ENSMUST00000191420 339 ntBASIC6.19□□□□□ -1.42
Cdx1P18111 Gm37450-201ENSMUST00000195218 170 ntBASIC6.19□□□□□ -1.42
Cdx1P18111 1700081B01Rik-202ENSMUST00000197543 648 ntTSL 3 BASIC6.19□□□□□ -1.42
Cdx1P18111 Abracl-201ENSMUST00000020002 846 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdx1P18111 Gm43690-201ENSMUST00000201213 266 ntBASIC6.19□□□□□ -1.42
Cdx1P18111 Gm42903-201ENSMUST00000202607 481 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cdx1P18111 Gm7482-201ENSMUST00000206446 505 ntBASIC6.19□□□□□ -1.42
Cdx1P18111 Gm6579-201ENSMUST00000208224 865 ntBASIC6.19□□□□□ -1.42
Cdx1P18111 Gm45889-201ENSMUST00000209535 1057 ntBASIC6.19□□□□□ -1.42
Cdx1P18111 5033426E14Rik-201ENSMUST00000212462 783 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cdx1P18111 Gm29154-206ENSMUST00000213410 1180 ntTSL 5 BASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms