Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm22271-201ENSMUST00000104035 128 ntBASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Gm11433-201ENSMUST00000118318 228 ntBASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Gm14795-201ENSMUST00000118461 471 ntBASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Gm13325-201ENSMUST00000118746 806 ntBASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Sh3d2c-ps1-201ENSMUST00000121498 904 ntBASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Gm16563-201ENSMUST00000162673 423 ntBASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Cd101-202ENSMUST00000167086 3223 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Gm8614-201ENSMUST00000182528 978 ntBASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Mir6415-201ENSMUST00000184064 100 ntBASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Mir6919-201ENSMUST00000185146 62 ntBASIC9.86□□□□□ -0.83
Ube3bQ9ES34 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Gm42538-201ENSMUST00000196233 566 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Gm3604-203ENSMUST00000202194 736 ntTSL 3 BASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Gm43967-201ENSMUST00000203787 301 ntBASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Gm43954-201ENSMUST00000204634 544 ntBASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Gm10043-201ENSMUST00000210691 235 ntBASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC9.86□□□□□ -0.83
Ube3bQ9ES34 AC158518.1-201ENSMUST00000216435 320 ntTSL 5 BASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Gpx4-ps2-202ENSMUST00000217344 782 ntBASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Gm18040-201ENSMUST00000217922 827 ntBASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Gm19161-201ENSMUST00000217958 737 ntBASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Olfr380-201ENSMUST00000075532 936 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Fcgr4-201ENSMUST00000078825 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Gm5614-201ENSMUST00000091097 318 ntBASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Ccdc36-201ENSMUST00000076592 2890 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Bach2-207ENSMUST00000171600 8493 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Bbs7-202ENSMUST00000108155 2437 ntTSL 5 BASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Mas1-201ENSMUST00000089015 2401 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Pax3-202ENSMUST00000087086 3863 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Npy2r-204ENSMUST00000182831 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Aoc1-203ENSMUST00000162948 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ube3bQ9ES34 AW822252-205ENSMUST00000192662 1352 ntBASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Gm10302-201ENSMUST00000174433 3535 ntBASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Parva-203ENSMUST00000106643 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Gm43792-201ENSMUST00000202492 2210 ntBASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Sf3b1-201ENSMUST00000027127 6195 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Gm37536-201ENSMUST00000194710 2491 ntBASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Ap3b1-201ENSMUST00000022196 4021 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Gm43323-201ENSMUST00000202328 4258 ntBASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Snrnp200-201ENSMUST00000103220 6745 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Ikbkg-201ENSMUST00000004330 6918 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Cers4-201ENSMUST00000008350 9475 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Atg4a-201ENSMUST00000112971 2202 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Foxn3-201ENSMUST00000046859 7705 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Ghrh-202ENSMUST00000109536 503 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Rgs8-204ENSMUST00000111814 678 ntTSL 3 BASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Gm11404-201ENSMUST00000120872 494 ntBASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Gm11260-201ENSMUST00000121163 942 ntBASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Bambi-ps1-201ENSMUST00000121525 592 ntBASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Gm11933-201ENSMUST00000121550 375 ntBASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Tmsb10-204ENSMUST00000144337 433 ntTSL 2 BASIC9.85□□□□□ -0.83
Ube3bQ9ES34 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Gm24347-201ENSMUST00000158711 142 ntBASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Gm19560-201ENSMUST00000177510 514 ntBASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Gm8993-201ENSMUST00000182182 983 ntBASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Calm5-201ENSMUST00000183198 589 ntBASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ube3bQ9ES34 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Gm28193-201ENSMUST00000189863 615 ntBASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Gm28211-201ENSMUST00000190920 315 ntBASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Gm35025-202ENSMUST00000193114 455 ntTSL 3 BASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Gm17979-201ENSMUST00000196646 611 ntBASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Gm17835-201ENSMUST00000196870 499 ntBASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Gm43044-201ENSMUST00000198091 379 ntBASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Gm42625-201ENSMUST00000198611 922 ntBASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Gm17977-201ENSMUST00000198743 574 ntBASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Gm6261-201ENSMUST00000204707 760 ntBASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Gm30771-201ENSMUST00000205683 737 ntTSL 3 BASIC9.85□□□□□ -0.83
Ube3bQ9ES34 AC158239.1-201ENSMUST00000216890 779 ntTSL 5 BASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Gm18112-201ENSMUST00000219862 1195 ntBASIC9.85□□□□□ -0.83
Ube3bQ9ES34 AC239878.2-201ENSMUST00000224048 464 ntBASIC9.85□□□□□ -0.83
Ube3bQ9ES34 AC154249.1-201ENSMUST00000226296 320 ntBASIC9.85□□□□□ -0.83
Ube3bQ9ES34 AC154738.3-201ENSMUST00000227953 409 ntBASIC9.85□□□□□ -0.83
Ube3bQ9ES34 CT030684.2-201ENSMUST00000228946 826 ntBASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Sun3-201ENSMUST00000043377 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ube3bQ9ES34 1700024P04Rik-201ENSMUST00000054425 481 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Cytl1-201ENSMUST00000073554 974 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Gm43161-201ENSMUST00000197020 1688 ntBASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Extl2-202ENSMUST00000106501 2887 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Gm15533-202ENSMUST00000206216 3262 ntBASIC9.85□□□□□ -0.83
Ube3bQ9ES34 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Gm28485-201ENSMUST00000185300 1500 ntTSL 5 BASIC9.85□□□□□ -0.83
Ube3bQ9ES34 Gm28684-201ENSMUST00000185586 1500 ntTSL 5 BASIC9.85□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms