Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm15699-201ENSMUST00000159213 280 ntTSL 5 BASIC7.15□□□□□ -1.26
Use1Q9CQ56 Gm7211-201ENSMUST00000172692 1118 ntBASIC7.15□□□□□ -1.26
Use1Q9CQ56 Gm8696-201ENSMUST00000174777 385 ntBASIC7.15□□□□□ -1.26
Use1Q9CQ56 D330041H03Rik-203ENSMUST00000180579 605 ntTSL 5 BASIC7.15□□□□□ -1.26
Use1Q9CQ56 Gm5205-201ENSMUST00000182253 1003 ntBASIC7.15□□□□□ -1.26
Use1Q9CQ56 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Use1Q9CQ56 Gm5835-201ENSMUST00000185806 1270 ntBASIC7.15□□□□□ -1.26
Use1Q9CQ56 Gm6799-201ENSMUST00000186919 573 ntBASIC7.15□□□□□ -1.26
Use1Q9CQ56 Gm29416-202ENSMUST00000191328 1201 ntTSL 5 BASIC7.15□□□□□ -1.26
Use1Q9CQ56 Ighv5-1-201ENSMUST00000193324 353 ntBASIC7.15□□□□□ -1.26
Use1Q9CQ56 Gm37108-201ENSMUST00000194605 626 ntBASIC7.15□□□□□ -1.26
Use1Q9CQ56 Ighv10-2-201ENSMUST00000195182 298 ntBASIC7.15□□□□□ -1.26
Use1Q9CQ56 Gm43805-201ENSMUST00000198488 824 ntBASIC7.15□□□□□ -1.26
Use1Q9CQ56 Gm45672-201ENSMUST00000209700 768 ntTSL 3 BASIC7.15□□□□□ -1.26
Use1Q9CQ56 AC133948.1-201ENSMUST00000214867 599 ntTSL 3 BASIC7.15□□□□□ -1.26
Use1Q9CQ56 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Use1Q9CQ56 Olfr1535-201ENSMUST00000068163 981 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Use1Q9CQ56 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Use1Q9CQ56 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Use1Q9CQ56 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Use1Q9CQ56 Gm17083-201ENSMUST00000165849 1366 ntBASIC7.15□□□□□ -1.26
Use1Q9CQ56 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Use1Q9CQ56 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
Use1Q9CQ56 Gm6502-201ENSMUST00000086050 1533 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Use1Q9CQ56 Gm38218-201ENSMUST00000193555 4689 ntBASIC7.15□□□□□ -1.27
Use1Q9CQ56 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.27
Use1Q9CQ56 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Use1Q9CQ56 Npr3-204ENSMUST00000228489 1969 ntBASIC7.15□□□□□ -1.27
Use1Q9CQ56 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
Use1Q9CQ56 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC7.15□□□□□ -1.27
Use1Q9CQ56 Trim40-201ENSMUST00000087158 2117 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
Use1Q9CQ56 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Use1Q9CQ56 Ankrd55-203ENSMUST00000165593 2749 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Use1Q9CQ56 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Use1Q9CQ56 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Use1Q9CQ56 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Use1Q9CQ56 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Use1Q9CQ56 Olfr353-201ENSMUST00000100149 936 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Use1Q9CQ56 Igkv4-72-201ENSMUST00000103346 402 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Use1Q9CQ56 Ighv1-9-201ENSMUST00000103498 348 ntAPPRIS ALT2 BASIC7.14□□□□□ -1.27
Use1Q9CQ56 Uqcrq-202ENSMUST00000109019 504 ntTSL 2 BASIC7.14□□□□□ -1.27
Use1Q9CQ56 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Use1Q9CQ56 Gm6181-201ENSMUST00000117187 264 ntBASIC7.14□□□□□ -1.27
Use1Q9CQ56 Gm13458-201ENSMUST00000118239 367 ntBASIC7.14□□□□□ -1.27
Use1Q9CQ56 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC7.14□□□□□ -1.27
Use1Q9CQ56 Gm11474-201ENSMUST00000120814 277 ntBASIC7.14□□□□□ -1.27
Use1Q9CQ56 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC7.14□□□□□ -1.27
Use1Q9CQ56 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Use1Q9CQ56 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Use1Q9CQ56 Gm6819-201ENSMUST00000185325 1891 ntBASIC7.14□□□□□ -1.27
Use1Q9CQ56 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC7.14□□□□□ -1.27
Use1Q9CQ56 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
Use1Q9CQ56 1700027F09Rik-201ENSMUST00000189767 767 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Use1Q9CQ56 Ica1l-206ENSMUST00000191251 3415 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Use1Q9CQ56 C630050I24Rik-201ENSMUST00000193420 783 ntBASIC7.14□□□□□ -1.27
Use1Q9CQ56 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Use1Q9CQ56 Gm43235-201ENSMUST00000200121 297 ntBASIC7.14□□□□□ -1.27
Use1Q9CQ56 Gm44306-201ENSMUST00000203058 203 ntBASIC7.14□□□□□ -1.27
Use1Q9CQ56 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Use1Q9CQ56 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Use1Q9CQ56 Gm4259-201ENSMUST00000206489 758 ntBASIC7.14□□□□□ -1.27
Use1Q9CQ56 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Use1Q9CQ56 Gm34006-201ENSMUST00000213985 655 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Use1Q9CQ56 Gm39456-201ENSMUST00000214759 1019 ntTSL 5 BASIC7.14□□□□□ -1.27
Use1Q9CQ56 AC192091.1-201ENSMUST00000218668 439 ntBASIC7.14□□□□□ -1.27
Use1Q9CQ56 AC153500.1-201ENSMUST00000219794 625 ntTSL 3 BASIC7.14□□□□□ -1.27
Use1Q9CQ56 AC111092.1-201ENSMUST00000220181 411 ntTSL 3 BASIC7.14□□□□□ -1.27
Use1Q9CQ56 1700066J03Rik-202ENSMUST00000224280 516 ntBASIC7.14□□□□□ -1.27
Use1Q9CQ56 AC124715.2-201ENSMUST00000226762 617 ntBASIC7.14□□□□□ -1.27
Use1Q9CQ56 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Use1Q9CQ56 Olfr139-201ENSMUST00000050678 948 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Use1Q9CQ56 Pcp4-201ENSMUST00000061739 641 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Use1Q9CQ56 Eif3k-201ENSMUST00000066070 774 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Use1Q9CQ56 Iba57-202ENSMUST00000069631 864 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Use1Q9CQ56 Gm25259-201ENSMUST00000083048 193 ntBASIC7.14□□□□□ -1.27
Use1Q9CQ56 6720489N17Rik-201ENSMUST00000091563 318 ntTSL 5 BASIC7.14□□□□□ -1.27
Use1Q9CQ56 Dnajc8-202ENSMUST00000094657 1401 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Use1Q9CQ56 Olfr1226-201ENSMUST00000099790 933 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Use1Q9CQ56 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Use1Q9CQ56 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Use1Q9CQ56 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Use1Q9CQ56 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Use1Q9CQ56 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC7.14□□□□□ -1.27
Use1Q9CQ56 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Use1Q9CQ56 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Use1Q9CQ56 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC7.13□□□□□ -1.27
Use1Q9CQ56 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Use1Q9CQ56 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC7.13□□□□□ -1.27
Use1Q9CQ56 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
Use1Q9CQ56 Gm42973-201ENSMUST00000197913 3200 ntBASIC7.13□□□□□ -1.27
Use1Q9CQ56 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Use1Q9CQ56 Cpvl-203ENSMUST00000204674 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Use1Q9CQ56 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC7.13□□□□□ -1.27
Use1Q9CQ56 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Use1Q9CQ56 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Use1Q9CQ56 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Use1Q9CQ56 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC7.13□□□□□ -1.27
Use1Q9CQ56 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Use1Q9CQ56 Blvrb-203ENSMUST00000108358 951 ntTSL 3 BASIC7.13□□□□□ -1.27
Use1Q9CQ56 4930449I24Rik-201ENSMUST00000110598 1168 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 103.9 ms