Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm38173-201ENSMUST00000193126 2314 ntBASIC6.77□□□□□ -1.33
Scrt1Q99M85 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Scrt1Q99M85 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Scrt1Q99M85 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Scrt1Q99M85 Anxa9-201ENSMUST00000015846 1851 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Scrt1Q99M85 Trim2-206ENSMUST00000107695 7200 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Scrt1Q99M85 Naip1-202ENSMUST00000221727 1968 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Scrt1Q99M85 Emsy-201ENSMUST00000038359 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Scrt1Q99M85 Rapgef6-210ENSMUST00000207429 5164 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Scrt1Q99M85 Kif5a-202ENSMUST00000217895 3996 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Gm10601-201ENSMUST00000120436 1422 ntBASIC6.76□□□□□ -1.33
Scrt1Q99M85 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Gm46430-207ENSMUST00000222254 1703 ntTSL 5 BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Tmem144-201ENSMUST00000029568 2898 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Zfp952-201ENSMUST00000087666 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Scrt1Q99M85 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC6.76□□□□□ -1.33
Scrt1Q99M85 Exoc3-201ENSMUST00000035934 4922 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Lrrc1-201ENSMUST00000113421 2630 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Rfx3-204ENSMUST00000172907 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Sorbs2-201ENSMUST00000067065 6337 ntTSL 5 BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Klf10-202ENSMUST00000226363 2917 ntBASIC6.76□□□□□ -1.33
Scrt1Q99M85 Phc3-206ENSMUST00000129817 3019 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Olfr1019-201ENSMUST00000102634 933 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Smim23-202ENSMUST00000109365 331 ntTSL 5 BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Amelx-203ENSMUST00000112119 841 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Rpl35a-202ENSMUST00000115075 518 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Gm13521-201ENSMUST00000118922 866 ntBASIC6.76□□□□□ -1.33
Scrt1Q99M85 Gm6877-201ENSMUST00000119347 1101 ntBASIC6.76□□□□□ -1.33
Scrt1Q99M85 Gm14746-201ENSMUST00000120309 741 ntBASIC6.76□□□□□ -1.33
Scrt1Q99M85 Gm12692-201ENSMUST00000121092 546 ntBASIC6.76□□□□□ -1.33
Scrt1Q99M85 Gm5135-201ENSMUST00000121100 573 ntBASIC6.76□□□□□ -1.33
Scrt1Q99M85 Gm11263-201ENSMUST00000121853 749 ntBASIC6.76□□□□□ -1.33
Scrt1Q99M85 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Gm24682-201ENSMUST00000158764 137 ntBASIC6.76□□□□□ -1.33
Scrt1Q99M85 Gm27595-201ENSMUST00000184579 112 ntBASIC6.76□□□□□ -1.33
Scrt1Q99M85 Pdc-204ENSMUST00000191228 1235 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Gm42804-201ENSMUST00000199701 178 ntBASIC6.76□□□□□ -1.33
Scrt1Q99M85 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Gm8667-201ENSMUST00000211112 449 ntBASIC6.76□□□□□ -1.33
Scrt1Q99M85 Gm9604-201ENSMUST00000211175 433 ntBASIC6.76□□□□□ -1.33
Scrt1Q99M85 Gm33778-201ENSMUST00000216884 704 ntBASIC6.76□□□□□ -1.33
Scrt1Q99M85 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Scrt1Q99M85 AC131117.2-202ENSMUST00000224539 547 ntBASIC6.76□□□□□ -1.33
Scrt1Q99M85 Wdr48-201ENSMUST00000036561 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Scrt1Q99M85 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Mrgprb4-201ENSMUST00000094388 1219 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Lamb3-202ENSMUST00000159955 4013 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Golga3-201ENSMUST00000031477 4805 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Scrt1Q99M85 D830032E09Rik-201ENSMUST00000186875 2193 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Evi2a-205ENSMUST00000170799 2289 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Vmn2r52-201ENSMUST00000164918 2559 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Smarcal1-201ENSMUST00000047615 3059 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Osbpl3-204ENSMUST00000114468 6494 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Slc38a1-202ENSMUST00000088454 7059 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Gm16638-202ENSMUST00000208892 8508 ntTSL 5 BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Kyat3-201ENSMUST00000044392 4206 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Gm16487-201ENSMUST00000105048 4037 ntBASIC6.76□□□□□ -1.33
Scrt1Q99M85 R3hdm2-202ENSMUST00000077046 4029 ntAPPRIS P2 TSL 5 BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Prr15l-204ENSMUST00000107636 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Gm37403-201ENSMUST00000193775 3521 ntBASIC6.76□□□□□ -1.33
Scrt1Q99M85 Cpvl-203ENSMUST00000204674 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Scrt1Q99M85 A330015K06Rik-201ENSMUST00000195489 4286 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Scrt1Q99M85 4930408K08Rik-201ENSMUST00000195936 1436 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Scrt1Q99M85 Fam129a-205ENSMUST00000148810 6531 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Scrt1Q99M85 AC153548.1-201ENSMUST00000219283 2661 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Scrt1Q99M85 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC6.75□□□□□ -1.33
Scrt1Q99M85 Gm29028-201ENSMUST00000186297 2166 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Scrt1Q99M85 Slfn5-202ENSMUST00000108157 3007 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Scrt1Q99M85 Synj2-201ENSMUST00000061091 4072 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Scrt1Q99M85 Angpt2-201ENSMUST00000033846 3560 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Scrt1Q99M85 Olfr1426-204ENSMUST00000219005 2507 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Scrt1Q99M85 Gm7134-201ENSMUST00000122296 2406 ntBASIC6.75□□□□□ -1.33
Scrt1Q99M85 Erc1-201ENSMUST00000032279 8356 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Scrt1Q99M85 Prkg1-201ENSMUST00000065067 3914 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Scrt1Q99M85 Gm22470-201ENSMUST00000104117 130 ntBASIC6.75□□□□□ -1.33
Scrt1Q99M85 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Scrt1Q99M85 Gm14036-201ENSMUST00000118248 480 ntBASIC6.75□□□□□ -1.33
Scrt1Q99M85 Gm12459-201ENSMUST00000120659 356 ntBASIC6.75□□□□□ -1.33
Scrt1Q99M85 Gm14186-201ENSMUST00000120804 137 ntBASIC6.75□□□□□ -1.33
Scrt1Q99M85 Gm12632-201ENSMUST00000121223 495 ntBASIC6.75□□□□□ -1.33
Scrt1Q99M85 Pla2g2a-203ENSMUST00000135748 788 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Scrt1Q99M85 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Scrt1Q99M85 Gm6264-201ENSMUST00000160802 624 ntBASIC6.75□□□□□ -1.33
Scrt1Q99M85 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC6.75□□□□□ -1.33
Scrt1Q99M85 Gm7560-201ENSMUST00000187748 873 ntBASIC6.75□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms