Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm25131-201ENSMUST00000082653 151 ntBASIC9.7□□□□□ -0.86
RtcbQ99LF4 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
RtcbQ99LF4 Gm45354-201ENSMUST00000199820 2557 ntBASIC9.7□□□□□ -0.86
RtcbQ99LF4 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
RtcbQ99LF4 Gm45172-201ENSMUST00000206054 1301 ntBASIC9.7□□□□□ -0.86
RtcbQ99LF4 Supt20-203ENSMUST00000197502 2751 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
RtcbQ99LF4 Gm37373-201ENSMUST00000194005 2812 ntBASIC9.7□□□□□ -0.86
RtcbQ99LF4 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
RtcbQ99LF4 Prdm6-202ENSMUST00000115398 1474 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
RtcbQ99LF4 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC9.7□□□□□ -0.86
RtcbQ99LF4 Gm5316-202ENSMUST00000185734 3096 ntBASIC9.7□□□□□ -0.86
RtcbQ99LF4 Pnma2-202ENSMUST00000122431 3143 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
RtcbQ99LF4 Olfr569-202ENSMUST00000217024 4741 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
RtcbQ99LF4 Olfr524-202ENSMUST00000215815 5044 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
RtcbQ99LF4 Gng7-204ENSMUST00000118233 3433 ntAPPRIS ALT1 TSL 1 (best) BASIC9.7□□□□□ -0.86
RtcbQ99LF4 Sox5-204ENSMUST00000111748 1734 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
RtcbQ99LF4 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
RtcbQ99LF4 Ikbkg-201ENSMUST00000004330 6918 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
RtcbQ99LF4 Gm37040-201ENSMUST00000191740 1824 ntBASIC9.7□□□□□ -0.86
RtcbQ99LF4 Ankrd45-202ENSMUST00000111608 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
RtcbQ99LF4 Heatr9-201ENSMUST00000019069 1875 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
RtcbQ99LF4 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
RtcbQ99LF4 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
RtcbQ99LF4 Dusp3-203ENSMUST00000107173 4311 ntTSL 2 BASIC9.7□□□□□ -0.86
RtcbQ99LF4 Gm8464-201ENSMUST00000140208 2200 ntBASIC9.7□□□□□ -0.86
RtcbQ99LF4 Gm4750-202ENSMUST00000152262 2200 ntBASIC9.7□□□□□ -0.86
RtcbQ99LF4 Gm45534-201ENSMUST00000211449 2339 ntBASIC9.7□□□□□ -0.86
RtcbQ99LF4 Cers4-201ENSMUST00000008350 9475 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
RtcbQ99LF4 Zbtb44-206ENSMUST00000217092 2472 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
RtcbQ99LF4 Vmn2r92-201ENSMUST00000169686 2583 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
RtcbQ99LF4 Grhl3-201ENSMUST00000105855 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
RtcbQ99LF4 Ctnnd1-216ENSMUST00000111690 5945 ntTSL 5 BASIC9.69□□□□□ -0.86
RtcbQ99LF4 Ctnnd1-222ENSMUST00000111696 6281 ntTSL 5 BASIC9.69□□□□□ -0.86
RtcbQ99LF4 Senp6-203ENSMUST00000165607 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
RtcbQ99LF4 Myo1f-201ENSMUST00000087605 3819 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
RtcbQ99LF4 Gm25760-201ENSMUST00000103989 132 ntBASIC9.69□□□□□ -0.86
RtcbQ99LF4 Ttll1-203ENSMUST00000109480 1876 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
RtcbQ99LF4 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
RtcbQ99LF4 Defa-ps7-201ENSMUST00000117139 168 ntBASIC9.69□□□□□ -0.86
RtcbQ99LF4 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
RtcbQ99LF4 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
RtcbQ99LF4 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
RtcbQ99LF4 Gm24682-201ENSMUST00000158764 137 ntBASIC9.69□□□□□ -0.86
RtcbQ99LF4 Gm16540-201ENSMUST00000160263 426 ntTSL 5 BASIC9.69□□□□□ -0.86
RtcbQ99LF4 Gm7244-201ENSMUST00000164658 455 ntBASIC9.69□□□□□ -0.86
RtcbQ99LF4 Phc3-210ENSMUST00000177992 2920 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
RtcbQ99LF4 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
RtcbQ99LF4 Pea15b-201ENSMUST00000182806 387 ntBASIC9.69□□□□□ -0.86
RtcbQ99LF4 Gm27373-201ENSMUST00000184017 184 ntBASIC9.69□□□□□ -0.86
RtcbQ99LF4 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC9.69□□□□□ -0.86
RtcbQ99LF4 Gm29383-201ENSMUST00000188284 480 ntBASIC9.69□□□□□ -0.86
RtcbQ99LF4 Unc45b-201ENSMUST00000018989 3549 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
RtcbQ99LF4 Gm28720-201ENSMUST00000190728 3156 ntBASIC9.69□□□□□ -0.86
RtcbQ99LF4 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
RtcbQ99LF4 Gm44712-201ENSMUST00000206250 1076 ntBASIC9.69□□□□□ -0.86
RtcbQ99LF4 Dus4l-201ENSMUST00000020977 1773 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
RtcbQ99LF4 Gm7435-202ENSMUST00000216003 2424 ntBASIC9.69□□□□□ -0.86
RtcbQ99LF4 Gm20110-201ENSMUST00000218263 2095 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
RtcbQ99LF4 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC9.69□□□□□ -0.86
RtcbQ99LF4 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
RtcbQ99LF4 AC159188.3-201ENSMUST00000224199 880 ntBASIC9.69□□□□□ -0.86
RtcbQ99LF4 AC133598.5-201ENSMUST00000224937 1517 ntBASIC9.69□□□□□ -0.86
RtcbQ99LF4 Olfr449-201ENSMUST00000050729 1037 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
RtcbQ99LF4 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
RtcbQ99LF4 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
RtcbQ99LF4 Apobec4-201ENSMUST00000068875 1566 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
RtcbQ99LF4 Scfd2-201ENSMUST00000072857 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
RtcbQ99LF4 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
RtcbQ99LF4 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
RtcbQ99LF4 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
RtcbQ99LF4 Vmn1r16-202ENSMUST00000227283 5813 ntAPPRIS P2 BASIC9.69□□□□□ -0.86
RtcbQ99LF4 Mapk6-201ENSMUST00000049355 4072 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
RtcbQ99LF4 Sncaip-202ENSMUST00000115410 3585 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
RtcbQ99LF4 Zfp658-202ENSMUST00000107972 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
RtcbQ99LF4 Pgr15l-201ENSMUST00000033556 5379 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
RtcbQ99LF4 Rhoh-201ENSMUST00000031106 5093 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
RtcbQ99LF4 Prkcz-202ENSMUST00000103178 4083 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
RtcbQ99LF4 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC9.68□□□□□ -0.86
RtcbQ99LF4 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
RtcbQ99LF4 Nsun3-201ENSMUST00000063089 3813 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
RtcbQ99LF4 Gm8049-201ENSMUST00000214336 1782 ntBASIC9.68□□□□□ -0.86
RtcbQ99LF4 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC9.68□□□□□ -0.86
RtcbQ99LF4 Tagap-201ENSMUST00000036370 3076 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
RtcbQ99LF4 Dock9-206ENSMUST00000212181 7368 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
RtcbQ99LF4 4930543E12Rik-202ENSMUST00000210408 1429 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
RtcbQ99LF4 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
RtcbQ99LF4 Map3k7-204ENSMUST00000108184 5491 ntTSL 5 BASIC9.68□□□□□ -0.86
RtcbQ99LF4 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
RtcbQ99LF4 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
RtcbQ99LF4 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
RtcbQ99LF4 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC9.68□□□□□ -0.86
RtcbQ99LF4 Rps25-ps1-201ENSMUST00000119876 378 ntBASIC9.68□□□□□ -0.86
RtcbQ99LF4 Gm16523-201ENSMUST00000121253 592 ntBASIC9.68□□□□□ -0.86
RtcbQ99LF4 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC9.68□□□□□ -0.86
RtcbQ99LF4 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC9.68□□□□□ -0.86
RtcbQ99LF4 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
RtcbQ99LF4 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC9.68□□□□□ -0.86
RtcbQ99LF4 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC9.68□□□□□ -0.86
RtcbQ99LF4 Gm3307-201ENSMUST00000176164 632 ntBASIC9.68□□□□□ -0.86
RtcbQ99LF4 Gm2058-201ENSMUST00000178791 560 ntBASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms