Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Alx1Q8C8B0 Dusp3-202ENSMUST00000107172 4445 ntAPPRIS P1 TSL 3 BASIC8.83□□□□□ -1
Alx1Q8C8B0 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Alx1Q8C8B0 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Alx1Q8C8B0 Cysltr2-201ENSMUST00000044664 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Alx1Q8C8B0 Gm43686-201ENSMUST00000197351 2439 ntBASIC8.83□□□□□ -1
Alx1Q8C8B0 Slfn4-202ENSMUST00000167596 3703 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Alx1Q8C8B0 Gm45807-201ENSMUST00000209142 2874 ntBASIC8.83□□□□□ -1
Alx1Q8C8B0 Extl2-203ENSMUST00000106502 2840 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Alx1Q8C8B0 Ankrd6-203ENSMUST00000084749 4573 ntAPPRIS P2 TSL 5 BASIC8.82□□□□□ -1
Alx1Q8C8B0 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Alx1Q8C8B0 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Alx1Q8C8B0 Olfr1261-203ENSMUST00000213909 2912 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
Alx1Q8C8B0 Fam114a1-201ENSMUST00000031080 2938 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Alx1Q8C8B0 Plag1-201ENSMUST00000003369 4774 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Alx1Q8C8B0 Gm7265-201ENSMUST00000192735 3502 ntBASIC8.82□□□□□ -1
Alx1Q8C8B0 Acox3-210ENSMUST00000202266 3501 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Alx1Q8C8B0 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC8.82□□□□□ -1
Alx1Q8C8B0 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Alx1Q8C8B0 Strbp-202ENSMUST00000072186 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Alx1Q8C8B0 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Alx1Q8C8B0 Odf2-202ENSMUST00000046571 3959 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
Alx1Q8C8B0 Gm18537-202ENSMUST00000206215 1503 ntBASIC8.82□□□□□ -1
Alx1Q8C8B0 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
Alx1Q8C8B0 Gm12306-201ENSMUST00000117256 171 ntBASIC8.82□□□□□ -1
Alx1Q8C8B0 Gm14891-201ENSMUST00000117378 596 ntBASIC8.82□□□□□ -1
Alx1Q8C8B0 Gm15481-201ENSMUST00000120264 539 ntBASIC8.82□□□□□ -1
Alx1Q8C8B0 Gm11945-201ENSMUST00000120551 476 ntBASIC8.82□□□□□ -1
Alx1Q8C8B0 Gm24893-201ENSMUST00000122745 369 ntBASIC8.82□□□□□ -1
Alx1Q8C8B0 Trav8-2-201ENSMUST00000130122 337 ntBASIC8.82□□□□□ -1
Alx1Q8C8B0 Gm14319-201ENSMUST00000142937 703 ntTSL 2 BASIC8.82□□□□□ -1
Alx1Q8C8B0 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC8.82□□□□□ -1
Alx1Q8C8B0 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Alx1Q8C8B0 Clec2i-205ENSMUST00000162666 1091 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Alx1Q8C8B0 Mir3078-201ENSMUST00000175231 87 ntBASIC8.82□□□□□ -1
Alx1Q8C8B0 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC8.82□□□□□ -1
Alx1Q8C8B0 Gm19035-202ENSMUST00000194575 959 ntBASIC8.82□□□□□ -1
Alx1Q8C8B0 Gm7789-201ENSMUST00000210473 701 ntTSL 3 BASIC8.82□□□□□ -1
Alx1Q8C8B0 AC102582.1-201ENSMUST00000215376 378 ntBASIC8.82□□□□□ -1
Alx1Q8C8B0 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC8.82□□□□□ -1
Alx1Q8C8B0 AC122309.1-201ENSMUST00000226945 421 ntBASIC8.82□□□□□ -1
Alx1Q8C8B0 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Alx1Q8C8B0 Clasp2-207ENSMUST00000214522 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Alx1Q8C8B0 Setd5-202ENSMUST00000113155 6362 ntTSL 1 (best) BASIC8.82□□□□□ -1
Alx1Q8C8B0 Myo16-202ENSMUST00000207204 6719 ntTSL 1 (best) BASIC8.82□□□□□ -1
Alx1Q8C8B0 Itgae-202ENSMUST00000102537 3825 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Alx1Q8C8B0 Pinc-201ENSMUST00000190229 2170 ntTSL 1 (best) BASIC8.82□□□□□ -1
Alx1Q8C8B0 A630009H07Rik-201ENSMUST00000208485 2159 ntTSL 1 (best) BASIC8.82□□□□□ -1
Alx1Q8C8B0 Klhl41-201ENSMUST00000100050 2529 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Alx1Q8C8B0 Gk-202ENSMUST00000113978 4279 ntTSL 1 (best) BASIC8.82□□□□□ -1
Alx1Q8C8B0 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC8.82□□□□□ -1
Alx1Q8C8B0 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC8.81□□□□□ -1
Alx1Q8C8B0 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC8.81□□□□□ -1
Alx1Q8C8B0 Musk-201ENSMUST00000081919 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Alx1Q8C8B0 Acer2-201ENSMUST00000045224 4216 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Alx1Q8C8B0 Ctnnd1-214ENSMUST00000111688 6146 ntTSL 5 BASIC8.81□□□□□ -1
Alx1Q8C8B0 Olfr825-203ENSMUST00000216530 3502 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Alx1Q8C8B0 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Alx1Q8C8B0 Kcnd2-201ENSMUST00000081542 5152 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Alx1Q8C8B0 Tsc1-203ENSMUST00000113869 7702 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Alx1Q8C8B0 Bbx-208ENSMUST00000138166 8743 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Alx1Q8C8B0 Ighv1-84-201ENSMUST00000103551 351 ntAPPRIS P1 BASIC8.81□□□□□ -1
Alx1Q8C8B0 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
Alx1Q8C8B0 Defa-ps7-201ENSMUST00000117139 168 ntBASIC8.81□□□□□ -1
Alx1Q8C8B0 Gm24139-201ENSMUST00000122780 288 ntBASIC8.81□□□□□ -1
Alx1Q8C8B0 Gm24782-201ENSMUST00000157641 132 ntBASIC8.81□□□□□ -1
Alx1Q8C8B0 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC8.81□□□□□ -1
Alx1Q8C8B0 Gm20625-201ENSMUST00000177065 698 ntTSL 3 BASIC8.81□□□□□ -1
Alx1Q8C8B0 Gm24923-201ENSMUST00000178201 88 ntBASIC8.81□□□□□ -1
Alx1Q8C8B0 Gm42938-201ENSMUST00000198414 1072 ntBASIC8.81□□□□□ -1
Alx1Q8C8B0 Gm7285-201ENSMUST00000198801 580 ntBASIC8.81□□□□□ -1
Alx1Q8C8B0 Gm33248-201ENSMUST00000205836 617 ntTSL 3 BASIC8.81□□□□□ -1
Alx1Q8C8B0 5930435M05Rik-202ENSMUST00000207936 414 ntTSL 1 (best) BASIC8.81□□□□□ -1
Alx1Q8C8B0 Gm2089-201ENSMUST00000218294 479 ntBASIC8.81□□□□□ -1
Alx1Q8C8B0 AC139941.1-201ENSMUST00000221517 478 ntBASIC8.81□□□□□ -1
Alx1Q8C8B0 Olfr890-201ENSMUST00000079804 945 ntBASIC8.81□□□□□ -1
Alx1Q8C8B0 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Alx1Q8C8B0 n-R5s156-201ENSMUST00000083377 105 ntBASIC8.81□□□□□ -1
Alx1Q8C8B0 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC8.81□□□□□ -1
Alx1Q8C8B0 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC8.81□□□□□ -1
Alx1Q8C8B0 Lemd1-205ENSMUST00000188169 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Alx1Q8C8B0 Gm42771-201ENSMUST00000198342 2486 ntBASIC8.81□□□□□ -1
Alx1Q8C8B0 Tbc1d24-216ENSMUST00000202925 4216 ntTSL 5 BASIC8.81□□□□□ -1
Alx1Q8C8B0 Kcnj15-208ENSMUST00000113862 5705 ntTSL 1 (best) BASIC8.81□□□□□ -1
Alx1Q8C8B0 Gm9866-206ENSMUST00000222838 1580 ntTSL 5 BASIC8.81□□□□□ -1
Alx1Q8C8B0 Tmem173-201ENSMUST00000115728 2302 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Alx1Q8C8B0 Fam60a-209ENSMUST00000203164 2442 ntTSL 5 BASIC8.81□□□□□ -1
Alx1Q8C8B0 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Alx1Q8C8B0 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC8.81□□□□□ -1
Alx1Q8C8B0 Cd44-208ENSMUST00000111198 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Alx1Q8C8B0 Abca1-201ENSMUST00000030010 10262 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Alx1Q8C8B0 Klf10-202ENSMUST00000226363 2917 ntBASIC8.81□□□□□ -1
Alx1Q8C8B0 Cdh13-201ENSMUST00000117160 3785 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Alx1Q8C8B0 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC8.8□□□□□ -1
Alx1Q8C8B0 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC8.8□□□□□ -1
Alx1Q8C8B0 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Alx1Q8C8B0 Vmn1r44-212ENSMUST00000228183 1838 ntBASIC8.8□□□□□ -1
Alx1Q8C8B0 Slc12a1-201ENSMUST00000028630 4645 ntAPPRIS P5 TSL 1 (best) BASIC8.8□□□□□ -1
Alx1Q8C8B0 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Alx1Q8C8B0 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC8.8□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms