Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm37618-201ENSMUST00000192891 3075 ntBASIC9.62□□□□□ -0.87
Ccdc60Q8C4J0 Ggta1-205ENSMUST00000113002 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccdc60Q8C4J0 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC9.61□□□□□ -0.87
Ccdc60Q8C4J0 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ccdc60Q8C4J0 Gm42771-201ENSMUST00000198342 2486 ntBASIC9.61□□□□□ -0.87
Ccdc60Q8C4J0 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccdc60Q8C4J0 Frrs1-202ENSMUST00000195905 6823 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Ccdc60Q8C4J0 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccdc60Q8C4J0 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC9.61□□□□□ -0.87
Ccdc60Q8C4J0 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccdc60Q8C4J0 Ptk6-201ENSMUST00000016511 3689 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccdc60Q8C4J0 Gm23484-201ENSMUST00000104178 131 ntBASIC9.61□□□□□ -0.87
Ccdc60Q8C4J0 Gm16221-201ENSMUST00000117331 393 ntBASIC9.61□□□□□ -0.87
Ccdc60Q8C4J0 Gm13988-201ENSMUST00000119363 288 ntBASIC9.61□□□□□ -0.87
Ccdc60Q8C4J0 Tvp23bos-201ENSMUST00000148598 1011 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ccdc60Q8C4J0 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ccdc60Q8C4J0 Gm24011-201ENSMUST00000157732 268 ntBASIC9.61□□□□□ -0.87
Ccdc60Q8C4J0 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccdc60Q8C4J0 Gm27458-201ENSMUST00000185108 121 ntBASIC9.61□□□□□ -0.87
Ccdc60Q8C4J0 Gm22149-202ENSMUST00000196259 137 ntBASIC9.61□□□□□ -0.87
Ccdc60Q8C4J0 Gm20274-201ENSMUST00000206967 584 ntBASIC9.61□□□□□ -0.87
Ccdc60Q8C4J0 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ccdc60Q8C4J0 Zfp874a-208ENSMUST00000225479 1092 ntBASIC9.61□□□□□ -0.87
Ccdc60Q8C4J0 AC166822.1-201ENSMUST00000227667 636 ntBASIC9.61□□□□□ -0.87
Ccdc60Q8C4J0 Olfr680-ps1-201ENSMUST00000042676 936 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Ccdc60Q8C4J0 Rhox11-201ENSMUST00000054147 811 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccdc60Q8C4J0 Defa35-201ENSMUST00000078121 398 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccdc60Q8C4J0 Olfr1012-201ENSMUST00000099916 936 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Ccdc60Q8C4J0 Kcnk10-202ENSMUST00000221240 7460 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccdc60Q8C4J0 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ccdc60Q8C4J0 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccdc60Q8C4J0 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccdc60Q8C4J0 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccdc60Q8C4J0 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccdc60Q8C4J0 Bcorl1-201ENSMUST00000037596 7360 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Ccdc60Q8C4J0 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 Zfp942-202ENSMUST00000091879 3265 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 Gm38359-201ENSMUST00000191884 2225 ntBASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 Gm6787-201ENSMUST00000123120 1454 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 Cts7-203ENSMUST00000224986 1349 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 Gm43533-201ENSMUST00000202933 2936 ntBASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 Tmem173-201ENSMUST00000115728 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 Pkib-202ENSMUST00000075992 5317 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 Mtif2-201ENSMUST00000020749 2425 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 Gm8127-201ENSMUST00000163655 1427 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 Gm22152-201ENSMUST00000116966 125 ntBASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 Gm8644-201ENSMUST00000118619 596 ntBASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 Gm11681-201ENSMUST00000127337 870 ntTSL 2 BASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 Gm5445-201ENSMUST00000180224 480 ntBASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 Gm26812-201ENSMUST00000181647 328 ntTSL 3 BASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 Mir6403-201ENSMUST00000185007 129 ntBASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 Gm28164-201ENSMUST00000190143 442 ntBASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 Gm37724-201ENSMUST00000195240 1221 ntBASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 1700039M15Rik-201ENSMUST00000195377 1120 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 Scn8a-207ENSMUST00000200959 587 ntTSL 3 BASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 Gm42558-201ENSMUST00000200982 265 ntBASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 Olfr674-ps1-201ENSMUST00000209383 946 ntBASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 AC166052.1-201ENSMUST00000217028 397 ntTSL 2 BASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 AC157650.2-201ENSMUST00000224666 328 ntBASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 Olfr672-201ENSMUST00000050599 939 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 Gm831-201ENSMUST00000149942 4517 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 Olfr731-203ENSMUST00000214152 5572 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 AC164433.1-201ENSMUST00000226138 1544 ntBASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 Gm8844-201ENSMUST00000119460 2614 ntBASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 Meis1-201ENSMUST00000068264 3196 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 Gm43686-201ENSMUST00000197351 2439 ntBASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 Epg5-201ENSMUST00000044622 9672 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Ccdc60Q8C4J0 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Ccdc60Q8C4J0 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ccdc60Q8C4J0 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ccdc60Q8C4J0 Gm19719-201ENSMUST00000200934 4230 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ccdc60Q8C4J0 Gm5841-201ENSMUST00000195307 2177 ntBASIC9.59□□□□□ -0.87
Ccdc60Q8C4J0 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ccdc60Q8C4J0 Gm23323-201ENSMUST00000104471 133 ntBASIC9.59□□□□□ -0.87
Ccdc60Q8C4J0 Gm6490-201ENSMUST00000111862 461 ntBASIC9.59□□□□□ -0.87
Ccdc60Q8C4J0 Cldn16-201ENSMUST00000115302 950 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ccdc60Q8C4J0 Gm12844-201ENSMUST00000119463 582 ntBASIC9.59□□□□□ -0.87
Ccdc60Q8C4J0 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC9.59□□□□□ -0.87
Ccdc60Q8C4J0 Gm23079-201ENSMUST00000157847 117 ntBASIC9.59□□□□□ -0.87
Ccdc60Q8C4J0 Gm20797-201ENSMUST00000177894 383 ntBASIC9.59□□□□□ -0.87
Ccdc60Q8C4J0 Gm6610-201ENSMUST00000186324 358 ntBASIC9.59□□□□□ -0.87
Ccdc60Q8C4J0 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms