Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Cnot2-202ENSMUST00000105265 2268 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Prpf38bQ80SY5 Gm37663-201ENSMUST00000191887 2299 ntBASIC8.7□□□□□ -1.02
Prpf38bQ80SY5 Vmn1r44-212ENSMUST00000228183 1838 ntBASIC8.7□□□□□ -1.02
Prpf38bQ80SY5 Sulf1-203ENSMUST00000180062 4636 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Prpf38bQ80SY5 Etv5-203ENSMUST00000168774 3773 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Prpf38bQ80SY5 Tex52-202ENSMUST00000130785 1424 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Prpf38bQ80SY5 Skint7-204ENSMUST00000163281 1423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Prpf38bQ80SY5 Zkscan1-203ENSMUST00000110962 4843 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Prpf38bQ80SY5 Slco2b1-203ENSMUST00000107088 4369 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Prpf38bQ80SY5 CT009515.4-201ENSMUST00000228165 1494 ntBASIC8.7□□□□□ -1.02
Prpf38bQ80SY5 Lhx4-201ENSMUST00000027740 5514 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Prpf38bQ80SY5 Ifih1-202ENSMUST00000112459 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Pik3cg-207ENSMUST00000220366 4660 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Ndufb8-209ENSMUST00000171415 2142 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Cyld-205ENSMUST00000209532 7990 ntAPPRIS ALT1 TSL 5 BASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Gm28989-201ENSMUST00000187867 1613 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Adgrb3-207ENSMUST00000151309 5448 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 AC153526.3-201ENSMUST00000220145 2183 ntBASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Stat1-212ENSMUST00000191435 2803 ntAPPRIS ALT1 TSL 5 BASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Gng7-204ENSMUST00000118233 3433 ntAPPRIS ALT1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Gm14668-201ENSMUST00000118588 1724 ntBASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Sec31a-210ENSMUST00000182886 4047 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Gm38130-201ENSMUST00000194311 1761 ntBASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Deptor-202ENSMUST00000096433 8547 ntAPPRIS P4 TSL 1 (best) BASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Gatad2b-205ENSMUST00000199754 7438 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Naa20-204ENSMUST00000134759 1883 ntTSL 2 BASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Gm5742-201ENSMUST00000120764 505 ntBASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Gm13440-201ENSMUST00000121665 496 ntBASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Gm11243-201ENSMUST00000122335 394 ntBASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 B430319H21Rik-201ENSMUST00000123420 734 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Gm14764-201ENSMUST00000147130 313 ntTSL 5 BASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Gm17157-201ENSMUST00000172397 348 ntBASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Gm27927-201ENSMUST00000183791 126 ntBASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Gm6610-201ENSMUST00000186324 358 ntBASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Gm28361-201ENSMUST00000188825 474 ntBASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Gm18303-201ENSMUST00000190055 1176 ntBASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Prkar2a-206ENSMUST00000195405 1143 ntTSL 5 BASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Gm45227-201ENSMUST00000205585 169 ntBASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 AC154747.4-202ENSMUST00000223826 852 ntBASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 AC138604.2-201ENSMUST00000226620 921 ntBASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 AC154598.2-201ENSMUST00000227114 604 ntBASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Gsta2-201ENSMUST00000034902 870 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Olfr980-201ENSMUST00000073932 933 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Vpreb2-201ENSMUST00000075371 429 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Cldn34b1-201ENSMUST00000096852 1079 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Apol10b-201ENSMUST00000089465 1986 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Ocln-202ENSMUST00000069756 4052 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Gm17083-201ENSMUST00000165849 1366 ntBASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 4930544G11Rik-201ENSMUST00000043382 1406 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 AC140449.1-201ENSMUST00000214600 1459 ntBASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC8.69□□□□□ -1.02
Prpf38bQ80SY5 Btbd16-201ENSMUST00000048453 3434 ntAPPRIS P2 TSL 5 BASIC8.68□□□□□ -1.02
Prpf38bQ80SY5 Casc1-201ENSMUST00000060797 2572 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Prpf38bQ80SY5 Gm35172-201ENSMUST00000196037 2649 ntBASIC8.68□□□□□ -1.02
Prpf38bQ80SY5 Zhx3-201ENSMUST00000103111 9563 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Prpf38bQ80SY5 Kif14-201ENSMUST00000047817 8770 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Prpf38bQ80SY5 4921517D22Rik-201ENSMUST00000061597 3149 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Prpf38bQ80SY5 Rgr-201ENSMUST00000022338 4240 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Prpf38bQ80SY5 Gm10258-201ENSMUST00000091270 2123 ntBASIC8.68□□□□□ -1.02
Prpf38bQ80SY5 Grm8-203ENSMUST00000115324 3299 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
Prpf38bQ80SY5 AC122426.1-201ENSMUST00000214736 2235 ntBASIC8.68□□□□□ -1.02
Prpf38bQ80SY5 Gm16050-201ENSMUST00000160626 2363 ntTSL 3 BASIC8.68□□□□□ -1.02
Prpf38bQ80SY5 2600014E21Rik-201ENSMUST00000186411 4805 ntTSL 5 BASIC8.68□□□□□ -1.02
Prpf38bQ80SY5 Inpp5d-210ENSMUST00000169754 4937 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
Prpf38bQ80SY5 3830406C13Rik-202ENSMUST00000163392 2452 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Prpf38bQ80SY5 Olfr319-203ENSMUST00000215962 2500 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Prpf38bQ80SY5 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Prpf38bQ80SY5 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Prpf38bQ80SY5 Gm14777-201ENSMUST00000116306 176 ntBASIC8.68□□□□□ -1.02
Prpf38bQ80SY5 Gm13732-201ENSMUST00000117753 535 ntBASIC8.68□□□□□ -1.02
Prpf38bQ80SY5 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC8.68□□□□□ -1.02
Prpf38bQ80SY5 Gm11910-201ENSMUST00000121624 432 ntBASIC8.68□□□□□ -1.02
Prpf38bQ80SY5 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC8.68□□□□□ -1.02
Prpf38bQ80SY5 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Prpf38bQ80SY5 Gm22587-201ENSMUST00000157511 298 ntBASIC8.68□□□□□ -1.02
Prpf38bQ80SY5 Gm25266-201ENSMUST00000158521 304 ntBASIC8.68□□□□□ -1.02
Prpf38bQ80SY5 Gm16110-201ENSMUST00000161473 892 ntTSL 3 BASIC8.68□□□□□ -1.02
Prpf38bQ80SY5 Pid1-203ENSMUST00000175996 892 ntTSL 3 BASIC8.68□□□□□ -1.02
Prpf38bQ80SY5 Gm6489-201ENSMUST00000178167 696 ntBASIC8.68□□□□□ -1.02
Prpf38bQ80SY5 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Prpf38bQ80SY5 Mir7212-201ENSMUST00000184098 61 ntBASIC8.68□□□□□ -1.02
Prpf38bQ80SY5 Gm3121-201ENSMUST00000187086 406 ntBASIC8.68□□□□□ -1.02
Prpf38bQ80SY5 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Prpf38bQ80SY5 Gm37439-201ENSMUST00000193150 856 ntBASIC8.68□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms