Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC7.37□□□□□ -1.23
ClpbQ60649 Gm11186-201ENSMUST00000137096 1179 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
ClpbQ60649 Gm15286-201ENSMUST00000150623 743 ntTSL 3 BASIC7.37□□□□□ -1.23
ClpbQ60649 Gm23222-201ENSMUST00000158117 76 ntBASIC7.37□□□□□ -1.23
ClpbQ60649 Svs5-201ENSMUST00000017148 628 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
ClpbQ60649 Gm27187-202ENSMUST00000184873 606 ntTSL 3 BASIC7.37□□□□□ -1.23
ClpbQ60649 Gm5920-201ENSMUST00000187390 853 ntBASIC7.37□□□□□ -1.23
ClpbQ60649 Gm31406-201ENSMUST00000192297 671 ntTSL 2 BASIC7.37□□□□□ -1.23
ClpbQ60649 Gm26672-203ENSMUST00000192501 756 ntTSL 3 BASIC7.37□□□□□ -1.23
ClpbQ60649 Gm22149-202ENSMUST00000196259 137 ntBASIC7.37□□□□□ -1.23
ClpbQ60649 Gm7879-202ENSMUST00000200338 635 ntTSL 5 BASIC7.37□□□□□ -1.23
ClpbQ60649 9530078K11Rik-201ENSMUST00000208883 694 ntBASIC7.37□□□□□ -1.23
ClpbQ60649 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC7.37□□□□□ -1.23
ClpbQ60649 Gm33103-201ENSMUST00000212717 527 ntTSL 3 BASIC7.37□□□□□ -1.23
ClpbQ60649 Gm4898-201ENSMUST00000218519 832 ntBASIC7.37□□□□□ -1.23
ClpbQ60649 Asb12-201ENSMUST00000033549 1258 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
ClpbQ60649 Gm9801-201ENSMUST00000054860 408 ntBASIC7.37□□□□□ -1.23
ClpbQ60649 Gm6578-201ENSMUST00000080891 984 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
ClpbQ60649 Gm28906-201ENSMUST00000191371 1779 ntBASIC7.37□□□□□ -1.23
ClpbQ60649 Actr6-201ENSMUST00000020109 1705 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
ClpbQ60649 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
ClpbQ60649 Gm34653-201ENSMUST00000201786 1658 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
ClpbQ60649 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
ClpbQ60649 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
ClpbQ60649 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
ClpbQ60649 Fshr-201ENSMUST00000035701 2079 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
ClpbQ60649 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC7.37□□□□□ -1.23
ClpbQ60649 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC7.37□□□□□ -1.23
ClpbQ60649 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
ClpbQ60649 Gm37953-201ENSMUST00000195293 1884 ntBASIC7.36□□□□□ -1.23
ClpbQ60649 Crnn-203ENSMUST00000195515 1863 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
ClpbQ60649 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
ClpbQ60649 Gimd1-201ENSMUST00000163241 1413 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
ClpbQ60649 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
ClpbQ60649 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
ClpbQ60649 Olfr766-ps1-201ENSMUST00000204515 2909 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
ClpbQ60649 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
ClpbQ60649 Wdfy4-201ENSMUST00000061753 9681 ntAPPRIS P2 TSL 5 BASIC7.36□□□□□ -1.23
ClpbQ60649 Cfap44-201ENSMUST00000099742 6583 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
ClpbQ60649 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
ClpbQ60649 Gm44553-201ENSMUST00000206316 2037 ntBASIC7.36□□□□□ -1.23
ClpbQ60649 Gm3203-201ENSMUST00000197670 2389 ntBASIC7.36□□□□□ -1.23
ClpbQ60649 Rpl35a-202ENSMUST00000115075 518 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
ClpbQ60649 Cep41-202ENSMUST00000115130 485 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
ClpbQ60649 Gm15074-201ENSMUST00000117603 936 ntBASIC7.36□□□□□ -1.23
ClpbQ60649 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
ClpbQ60649 Gm11681-201ENSMUST00000127337 870 ntTSL 2 BASIC7.36□□□□□ -1.23
ClpbQ60649 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
ClpbQ60649 4930594O21Rik-202ENSMUST00000144981 682 ntTSL 3 BASIC7.36□□□□□ -1.23
ClpbQ60649 Platr14-205ENSMUST00000146553 770 ntTSL 2 BASIC7.36□□□□□ -1.23
ClpbQ60649 Mllt3-208ENSMUST00000149357 794 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
ClpbQ60649 Mir1932-201ENSMUST00000157390 90 ntBASIC7.36□□□□□ -1.23
ClpbQ60649 Gm22847-201ENSMUST00000157707 105 ntBASIC7.36□□□□□ -1.23
ClpbQ60649 Il21-202ENSMUST00000161015 529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
ClpbQ60649 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
ClpbQ60649 Mir6972-201ENSMUST00000184774 64 ntBASIC7.36□□□□□ -1.23
ClpbQ60649 Plet1-202ENSMUST00000188047 739 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
ClpbQ60649 Gm9451-201ENSMUST00000188491 604 ntBASIC7.36□□□□□ -1.23
ClpbQ60649 C430002N11Rik-204ENSMUST00000190054 443 ntTSL 3 BASIC7.36□□□□□ -1.23
ClpbQ60649 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC7.36□□□□□ -1.23
ClpbQ60649 Gm43287-201ENSMUST00000197747 600 ntBASIC7.36□□□□□ -1.23
ClpbQ60649 Gm42823-201ENSMUST00000197975 256 ntTSL 3 BASIC7.36□□□□□ -1.23
ClpbQ60649 Gm8575-201ENSMUST00000210262 521 ntBASIC7.36□□□□□ -1.23
ClpbQ60649 AC152819.1-201ENSMUST00000220435 871 ntTSL 5 BASIC7.36□□□□□ -1.23
ClpbQ60649 Oosp1-201ENSMUST00000048214 972 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
ClpbQ60649 Defb34-201ENSMUST00000064475 246 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
ClpbQ60649 Gm24696-201ENSMUST00000083878 134 ntBASIC7.36□□□□□ -1.23
ClpbQ60649 Atxn7l1-201ENSMUST00000077456 1624 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
ClpbQ60649 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
ClpbQ60649 Frmpd4-201ENSMUST00000112145 7924 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
ClpbQ60649 Il15ra-214ENSMUST00000138349 1936 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
ClpbQ60649 Klrb1c-201ENSMUST00000167691 2623 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
ClpbQ60649 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
ClpbQ60649 D830032E09Rik-201ENSMUST00000186875 2193 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
ClpbQ60649 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
ClpbQ60649 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
ClpbQ60649 Gm44249-201ENSMUST00000204538 1805 ntBASIC7.36□□□□□ -1.23
ClpbQ60649 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
ClpbQ60649 AC107757.2-201ENSMUST00000226370 1466 ntBASIC7.36□□□□□ -1.23
ClpbQ60649 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
ClpbQ60649 Gm18305-201ENSMUST00000216532 2128 ntBASIC7.36□□□□□ -1.23
ClpbQ60649 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
ClpbQ60649 Gm8428-201ENSMUST00000159919 1784 ntBASIC7.36□□□□□ -1.23
ClpbQ60649 Gphn-202ENSMUST00000110388 3300 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
ClpbQ60649 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
ClpbQ60649 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
ClpbQ60649 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
ClpbQ60649 Dram2-203ENSMUST00000121034 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
ClpbQ60649 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC7.35□□□□□ -1.23
ClpbQ60649 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC7.35□□□□□ -1.23
ClpbQ60649 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
ClpbQ60649 Gm7647-201ENSMUST00000200996 1389 ntBASIC7.35□□□□□ -1.23
ClpbQ60649 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
ClpbQ60649 Cd247-208ENSMUST00000178336 2807 ntTSL 5 BASIC7.35□□□□□ -1.23
ClpbQ60649 Mcmdc2-201ENSMUST00000052843 2826 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
ClpbQ60649 Antxrl-201ENSMUST00000058725 2532 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
ClpbQ60649 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
ClpbQ60649 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
ClpbQ60649 Igkv8-28-201ENSMUST00000103380 305 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
ClpbQ60649 Vps29-202ENSMUST00000117868 720 ntTSL 2 BASIC7.35□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 98.5 ms