Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC6.9□□□□□ -1.3
Col8a1Q00780 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC6.9□□□□□ -1.3
Col8a1Q00780 Gm4835-201ENSMUST00000155839 972 ntBASIC6.9□□□□□ -1.3
Col8a1Q00780 Mir1968-201ENSMUST00000157429 68 ntBASIC6.9□□□□□ -1.3
Col8a1Q00780 Gm22552-201ENSMUST00000157796 337 ntBASIC6.9□□□□□ -1.3
Col8a1Q00780 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC6.9□□□□□ -1.3
Col8a1Q00780 Gm20797-201ENSMUST00000177894 383 ntBASIC6.9□□□□□ -1.3
Col8a1Q00780 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
Col8a1Q00780 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
Col8a1Q00780 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
Col8a1Q00780 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
Col8a1Q00780 Gm26748-201ENSMUST00000180406 2972 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Col8a1Q00780 Gm9169-201ENSMUST00000182930 536 ntBASIC6.9□□□□□ -1.3
Col8a1Q00780 Gm26915-201ENSMUST00000183080 748 ntBASIC6.9□□□□□ -1.3
Col8a1Q00780 Mir6987-201ENSMUST00000184789 73 ntBASIC6.9□□□□□ -1.3
Col8a1Q00780 Gm6799-201ENSMUST00000186919 573 ntBASIC6.9□□□□□ -1.3
Col8a1Q00780 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Col8a1Q00780 Gm43743-201ENSMUST00000197898 697 ntBASIC6.9□□□□□ -1.3
Col8a1Q00780 Gm19211-201ENSMUST00000200251 1206 ntBASIC6.9□□□□□ -1.3
Col8a1Q00780 Gm43008-201ENSMUST00000202346 286 ntBASIC6.9□□□□□ -1.3
Col8a1Q00780 Gm29918-202ENSMUST00000206036 258 ntTSL 5 BASIC6.9□□□□□ -1.3
Col8a1Q00780 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Col8a1Q00780 Gm7943-201ENSMUST00000212078 1034 ntBASIC6.9□□□□□ -1.3
Col8a1Q00780 AC154904.1-201ENSMUST00000219510 312 ntBASIC6.9□□□□□ -1.3
Col8a1Q00780 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC6.9□□□□□ -1.3
Col8a1Q00780 4933409F18Rik-201ENSMUST00000221910 1267 ntTSL 5 BASIC6.9□□□□□ -1.3
Col8a1Q00780 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Col8a1Q00780 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC6.9□□□□□ -1.3
Col8a1Q00780 Gm34611-201ENSMUST00000223252 627 ntTSL 5 BASIC6.9□□□□□ -1.3
Col8a1Q00780 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Col8a1Q00780 CT010505.1-201ENSMUST00000227026 396 ntBASIC6.9□□□□□ -1.3
Col8a1Q00780 AC154838.3-201ENSMUST00000228876 965 ntBASIC6.9□□□□□ -1.3
Col8a1Q00780 Sbp-201ENSMUST00000024940 833 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Col8a1Q00780 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Col8a1Q00780 Rhox11-201ENSMUST00000054147 811 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Col8a1Q00780 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Col8a1Q00780 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC6.9□□□□□ -1.3
Col8a1Q00780 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Col8a1Q00780 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Col8a1Q00780 Acsl6-206ENSMUST00000101211 3106 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Col8a1Q00780 Def8-204ENSMUST00000108830 3191 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
Col8a1Q00780 A730065G17Rik-201ENSMUST00000217082 3335 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Col8a1Q00780 Zc3h3-201ENSMUST00000100538 3360 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Col8a1Q00780 Gm6729-201ENSMUST00000165173 1452 ntBASIC6.9□□□□□ -1.31
Col8a1Q00780 AC160118.1-201ENSMUST00000214497 2457 ntBASIC6.9□□□□□ -1.31
Col8a1Q00780 Hnrnpc-209ENSMUST00000228198 2498 ntBASIC6.9□□□□□ -1.31
Col8a1Q00780 Vmn2r8-201ENSMUST00000172140 2547 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Col8a1Q00780 CT025600.1-202ENSMUST00000220264 2510 ntTSL 5 BASIC6.9□□□□□ -1.31
Col8a1Q00780 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Col8a1Q00780 Galk2-201ENSMUST00000028636 2605 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
Col8a1Q00780 AC138221.1-201ENSMUST00000216180 4944 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Col8a1Q00780 Mpp7-201ENSMUST00000115869 4975 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Col8a1Q00780 Ulk4-201ENSMUST00000051479 3898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Col8a1Q00780 Atp2c1-212ENSMUST00000176770 2781 ntTSL 5 BASIC6.9□□□□□ -1.31
Col8a1Q00780 Mro-201ENSMUST00000119239 1772 ntAPPRIS P3 TSL 5 BASIC6.9□□□□□ -1.31
Col8a1Q00780 Rad51b-201ENSMUST00000079533 1759 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Col8a1Q00780 Mkl1-201ENSMUST00000109579 4154 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Col8a1Q00780 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col8a1Q00780 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col8a1Q00780 4930471M09Rik-202ENSMUST00000206475 1990 ntBASIC6.89□□□□□ -1.31
Col8a1Q00780 Musk-201ENSMUST00000081919 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col8a1Q00780 Zfp386-204ENSMUST00000183125 4779 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col8a1Q00780 Olfr522-201ENSMUST00000050585 4766 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Col8a1Q00780 Zfp667-205ENSMUST00000170776 3685 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col8a1Q00780 Pik3ca-203ENSMUST00000108243 6689 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Col8a1Q00780 Gucy2c-202ENSMUST00000078095 3863 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col8a1Q00780 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC6.89□□□□□ -1.31
Col8a1Q00780 Ubqln3-201ENSMUST00000057254 2376 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col8a1Q00780 AC102431.2-201ENSMUST00000224071 2448 ntBASIC6.89□□□□□ -1.31
Col8a1Q00780 Ttc26-205ENSMUST00000162554 4195 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col8a1Q00780 G430049J08Rik-201ENSMUST00000179907 2686 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Col8a1Q00780 4930524O08Rik-202ENSMUST00000184444 2719 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Col8a1Q00780 Grhl3-201ENSMUST00000105855 2789 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col8a1Q00780 Frem1-201ENSMUST00000071708 9307 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col8a1Q00780 Nedd4l-204ENSMUST00000224347 3150 ntBASIC6.89□□□□□ -1.31
Col8a1Q00780 Ptges-202ENSMUST00000102852 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col8a1Q00780 Kalrn-204ENSMUST00000114949 3618 ntTSL 5 BASIC6.89□□□□□ -1.31
Col8a1Q00780 Igkv8-28-201ENSMUST00000103380 305 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Col8a1Q00780 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Col8a1Q00780 Gm14943-201ENSMUST00000118056 546 ntBASIC6.89□□□□□ -1.31
Col8a1Q00780 Gm13038-201ENSMUST00000119886 459 ntBASIC6.89□□□□□ -1.31
Col8a1Q00780 Gm12731-201ENSMUST00000120932 268 ntBASIC6.89□□□□□ -1.31
Col8a1Q00780 Gm16407-201ENSMUST00000122134 567 ntBASIC6.89□□□□□ -1.31
Col8a1Q00780 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Col8a1Q00780 Gm12484-201ENSMUST00000156311 581 ntTSL 5 BASIC6.89□□□□□ -1.31
Col8a1Q00780 Gm25332-201ENSMUST00000158038 105 ntBASIC6.89□□□□□ -1.31
Col8a1Q00780 Gm23777-201ENSMUST00000158994 259 ntBASIC6.89□□□□□ -1.31
Col8a1Q00780 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
Col8a1Q00780 Gm3585-201ENSMUST00000173438 875 ntBASIC6.89□□□□□ -1.31
Col8a1Q00780 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
Col8a1Q00780 Gm27025-201ENSMUST00000182392 942 ntBASIC6.89□□□□□ -1.31
Col8a1Q00780 Gm27861-201ENSMUST00000183920 214 ntBASIC6.89□□□□□ -1.31
Col8a1Q00780 Gm29611-201ENSMUST00000186132 1011 ntTSL 5 BASIC6.89□□□□□ -1.31
Col8a1Q00780 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC6.89□□□□□ -1.31
Col8a1Q00780 1700020D05Rik-201ENSMUST00000189704 1021 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Col8a1Q00780 Gm28466-201ENSMUST00000190678 659 ntBASIC6.89□□□□□ -1.31
Col8a1Q00780 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC6.89□□□□□ -1.31
Col8a1Q00780 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Col8a1Q00780 Gm43590-201ENSMUST00000195987 387 ntBASIC6.89□□□□□ -1.31
Col8a1Q00780 Gm42454-201ENSMUST00000196805 1181 ntBASIC6.89□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms