Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Rap1gds1-201ENSMUST00000029796 3383 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Sox1P53783 Nebl-201ENSMUST00000028080 5780 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sox1P53783 Ctbp2-214ENSMUST00000169570 3604 ntTSL 5 BASIC8.33□□□□□ -1.08
Sox1P53783 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC8.33□□□□□ -1.08
Sox1P53783 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sox1P53783 Gm20045-201ENSMUST00000192658 5577 ntBASIC8.32□□□□□ -1.08
Sox1P53783 Sgk2-202ENSMUST00000117123 3034 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Sox1P53783 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC8.32□□□□□ -1.08
Sox1P53783 Xndc1-202ENSMUST00000106950 3131 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Sox1P53783 Muc6-201ENSMUST00000062451 8650 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Sox1P53783 Pik3c3-201ENSMUST00000091978 2998 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Sox1P53783 Pnmal1-201ENSMUST00000038163 4090 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Sox1P53783 Prkaa2-201ENSMUST00000030243 7969 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Sox1P53783 Apobec3-204ENSMUST00000175714 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Sox1P53783 Gm18594-201ENSMUST00000175733 1403 ntBASIC8.32□□□□□ -1.08
Sox1P53783 Zfp944-201ENSMUST00000115535 2784 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Sox1P53783 Gm26429-201ENSMUST00000104829 110 ntBASIC8.32□□□□□ -1.08
Sox1P53783 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
Sox1P53783 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC8.32□□□□□ -1.08
Sox1P53783 Arpc3-204ENSMUST00000111716 838 ntTSL 2 BASIC8.32□□□□□ -1.08
Sox1P53783 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Sox1P53783 Gm14864-201ENSMUST00000116164 1087 ntBASIC8.32□□□□□ -1.08
Sox1P53783 Gm14745-201ENSMUST00000118480 1096 ntBASIC8.32□□□□□ -1.08
Sox1P53783 Gm15913-201ENSMUST00000118492 331 ntBASIC8.32□□□□□ -1.08
Sox1P53783 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Sox1P53783 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC8.32□□□□□ -1.08
Sox1P53783 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC8.32□□□□□ -1.08
Sox1P53783 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC8.32□□□□□ -1.08
Sox1P53783 Gm17188-202ENSMUST00000165178 680 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Sox1P53783 Gm22254-201ENSMUST00000179186 110 ntBASIC8.32□□□□□ -1.08
Sox1P53783 4933406F09Rik-202ENSMUST00000180508 680 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Sox1P53783 Gm18303-201ENSMUST00000190055 1176 ntBASIC8.32□□□□□ -1.08
Sox1P53783 Gm37285-201ENSMUST00000194465 1139 ntBASIC8.32□□□□□ -1.08
Sox1P53783 Gm8182-201ENSMUST00000197863 769 ntBASIC8.32□□□□□ -1.08
Sox1P53783 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Sox1P53783 Gm9038-201ENSMUST00000203400 604 ntBASIC8.32□□□□□ -1.08
Sox1P53783 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC8.32□□□□□ -1.08
Sox1P53783 Gm18026-201ENSMUST00000222789 727 ntBASIC8.32□□□□□ -1.08
Sox1P53783 Gm34611-201ENSMUST00000223252 627 ntTSL 5 BASIC8.32□□□□□ -1.08
Sox1P53783 CU074400.1-201ENSMUST00000224411 220 ntBASIC8.32□□□□□ -1.08
Sox1P53783 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Sox1P53783 Rps6-ps1-201ENSMUST00000074205 750 ntBASIC8.32□□□□□ -1.08
Sox1P53783 Olfr656-201ENSMUST00000098172 991 ntAPPRIS P2 BASIC8.32□□□□□ -1.08
Sox1P53783 Gm15834-201ENSMUST00000129740 2097 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Sox1P53783 Olfr169-203ENSMUST00000215476 2476 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Sox1P53783 Sept2-213ENSMUST00000168776 3267 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Sox1P53783 Plekho2-201ENSMUST00000068944 3273 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Sox1P53783 Gm36694-201ENSMUST00000205855 2719 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Sox1P53783 Med12-204ENSMUST00000117706 6940 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Sox1P53783 Gm36952-201ENSMUST00000194923 3625 ntBASIC8.32□□□□□ -1.08
Sox1P53783 AI506816-205ENSMUST00000199941 2804 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Sox1P53783 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Sox1P53783 Phxr4-202ENSMUST00000216590 1391 ntBASIC8.32□□□□□ -1.08
Sox1P53783 Arhgap4-205ENSMUST00000114407 3051 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Sox1P53783 Igf1r-201ENSMUST00000005671 11409 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Sox1P53783 Cacna1d-209ENSMUST00000224785 8041 ntAPPRIS ALT2 BASIC8.32□□□□□ -1.08
Sox1P53783 D230017M19Rik-203ENSMUST00000181973 1649 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Sox1P53783 Tnfrsf1b-201ENSMUST00000030336 3818 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Sox1P53783 Kyat3-202ENSMUST00000106218 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Sox1P53783 Pax6-205ENSMUST00000111085 2779 ntAPPRIS P3 TSL 5 BASIC8.32□□□□□ -1.08
Sox1P53783 Nasp-202ENSMUST00000030457 2118 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Sox1P53783 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC8.32□□□□□ -1.08
Sox1P53783 Gm20682-201ENSMUST00000176552 3517 ntTSL 5 BASIC8.32□□□□□ -1.08
Sox1P53783 Gm26773-201ENSMUST00000180772 2868 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Sox1P53783 Gm42856-201ENSMUST00000200848 2852 ntBASIC8.32□□□□□ -1.08
Sox1P53783 Ndrg1-201ENSMUST00000005256 2886 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Sox1P53783 Gm43775-201ENSMUST00000201019 3395 ntBASIC8.31□□□□□ -1.08
Sox1P53783 AC115746.1-201ENSMUST00000228949 3617 ntBASIC8.31□□□□□ -1.08
Sox1P53783 Gramd4-201ENSMUST00000088931 4115 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Sox1P53783 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC8.31□□□□□ -1.08
Sox1P53783 Lrrc28-201ENSMUST00000032775 1817 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Sox1P53783 Gm6567-201ENSMUST00000205529 2095 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Sox1P53783 Gpr83-201ENSMUST00000034408 3586 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Sox1P53783 Vmn1r180-201ENSMUST00000173816 5060 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Sox1P53783 Ablim1-203ENSMUST00000104902 5907 ntTSL 5 BASIC8.31□□□□□ -1.08
Sox1P53783 Frk-202ENSMUST00000170771 3406 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Sox1P53783 Nipal4-201ENSMUST00000020679 3444 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Sox1P53783 Btbd16-201ENSMUST00000048453 3434 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
Sox1P53783 Apol11b-204ENSMUST00000181467 1933 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Sox1P53783 Plcg2-201ENSMUST00000081232 4298 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Sox1P53783 Trub1-202ENSMUST00000026073 3795 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Sox1P53783 Adh6-ps1-201ENSMUST00000171054 2789 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Sox1P53783 Foxp2-205ENSMUST00000115474 2544 ntTSL 5 BASIC8.31□□□□□ -1.08
Sox1P53783 Vmn2r40-201ENSMUST00000171942 3623 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Sox1P53783 Rtp1-201ENSMUST00000038730 3120 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Sox1P53783 Ankrd49-201ENSMUST00000034406 1753 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Sox1P53783 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC8.31□□□□□ -1.08
Sox1P53783 Gm25614-201ENSMUST00000104013 133 ntBASIC8.31□□□□□ -1.08
Sox1P53783 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Sox1P53783 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Sox1P53783 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC8.31□□□□□ -1.08
Sox1P53783 Gm15048-201ENSMUST00000118201 954 ntBASIC8.31□□□□□ -1.08
Sox1P53783 Gm15421-202ENSMUST00000118224 399 ntBASIC8.31□□□□□ -1.08
Sox1P53783 Gm4918-201ENSMUST00000119420 1084 ntBASIC8.31□□□□□ -1.08
Sox1P53783 Gm12632-201ENSMUST00000121223 495 ntBASIC8.31□□□□□ -1.08
Sox1P53783 Gm14826-201ENSMUST00000121284 901 ntBASIC8.31□□□□□ -1.08
Sox1P53783 Gm8722-201ENSMUST00000121466 769 ntBASIC8.31□□□□□ -1.08
Sox1P53783 Gm14695-201ENSMUST00000121721 282 ntBASIC8.31□□□□□ -1.08
Sox1P53783 Gm13719-201ENSMUST00000122018 2111 ntBASIC8.31□□□□□ -1.08
Sox1P53783 Gm24893-201ENSMUST00000122745 369 ntBASIC8.31□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms