Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm42424-201ENSMUST00000198319 376 ntBASIC8.12□□□□□ -1.11
Shmt1P50431 Gm43542-201ENSMUST00000199505 379 ntBASIC8.12□□□□□ -1.11
Shmt1P50431 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Shmt1P50431 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC8.12□□□□□ -1.11
Shmt1P50431 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC8.12□□□□□ -1.11
Shmt1P50431 Gm45202-201ENSMUST00000205955 332 ntTSL 3 BASIC8.12□□□□□ -1.11
Shmt1P50431 Olfr674-ps1-201ENSMUST00000209383 946 ntBASIC8.12□□□□□ -1.11
Shmt1P50431 Gm7789-201ENSMUST00000210473 701 ntTSL 3 BASIC8.12□□□□□ -1.11
Shmt1P50431 Thyn1-203ENSMUST00000213770 775 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Shmt1P50431 AC160338.3-201ENSMUST00000214836 384 ntBASIC8.12□□□□□ -1.11
Shmt1P50431 RMST_1.1-213ENSMUST00000220288 792 ntTSL 5 BASIC8.12□□□□□ -1.11
Shmt1P50431 AC162183.1-201ENSMUST00000224843 472 ntBASIC8.12□□□□□ -1.11
Shmt1P50431 AC159205.1-201ENSMUST00000225513 1099 ntBASIC8.12□□□□□ -1.11
Shmt1P50431 Olfr672-201ENSMUST00000050599 939 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Shmt1P50431 Olfr609-201ENSMUST00000055787 965 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Shmt1P50431 Gm5250-201ENSMUST00000059065 321 ntBASIC8.12□□□□□ -1.11
Shmt1P50431 Commd3-201ENSMUST00000061158 935 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Shmt1P50431 Cldn10-202ENSMUST00000071546 1031 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Shmt1P50431 Klrc2-201ENSMUST00000071920 1098 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Shmt1P50431 Olfr676-201ENSMUST00000098162 954 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Shmt1P50431 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Shmt1P50431 AC112265.1-201ENSMUST00000213522 1501 ntTSL 5 BASIC8.12□□□□□ -1.11
Shmt1P50431 Gm6502-201ENSMUST00000086050 1533 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Shmt1P50431 Vmn2r-ps26-201ENSMUST00000202039 2111 ntBASIC8.12□□□□□ -1.11
Shmt1P50431 Gm26656-201ENSMUST00000181825 2972 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Shmt1P50431 Gm10778-202ENSMUST00000189672 4735 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Shmt1P50431 Etl4-204ENSMUST00000114606 5284 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Shmt1P50431 Ankrd27-206ENSMUST00000190503 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Shmt1P50431 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Shmt1P50431 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Shmt1P50431 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Shmt1P50431 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Shmt1P50431 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC8.12□□□□□ -1.11
Shmt1P50431 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Shmt1P50431 Chek2-201ENSMUST00000066160 2276 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Shmt1P50431 Ivd-201ENSMUST00000028807 3665 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Shmt1P50431 Gm34653-201ENSMUST00000201786 1658 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Shmt1P50431 Gm5118-201ENSMUST00000184692 2203 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Shmt1P50431 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Shmt1P50431 Pfkfb2-211ENSMUST00000189534 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Shmt1P50431 Cd38-201ENSMUST00000030964 3270 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Shmt1P50431 Gtdc1-201ENSMUST00000049051 2197 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Shmt1P50431 Gm42972-201ENSMUST00000196937 5617 ntBASIC8.11□□□□□ -1.11
Shmt1P50431 Cyhr1-202ENSMUST00000081291 3959 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Shmt1P50431 Ppp2r3c-201ENSMUST00000021410 4216 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Shmt1P50431 Gm26920-201ENSMUST00000182746 2374 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
Shmt1P50431 Olfr1315-ps1-203ENSMUST00000217078 1559 ntAPPRIS P5 TSL 5 BASIC8.11□□□□□ -1.11
Shmt1P50431 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Shmt1P50431 Efl1-205ENSMUST00000179489 3608 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Shmt1P50431 Slc3a1-201ENSMUST00000024944 2307 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Shmt1P50431 Ofcc1-201ENSMUST00000054635 2816 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Shmt1P50431 Depdc5-204ENSMUST00000119705 7929 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Shmt1P50431 Amelx-203ENSMUST00000112119 841 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Shmt1P50431 Gm11517-201ENSMUST00000119491 387 ntBASIC8.11□□□□□ -1.11
Shmt1P50431 Gm12632-201ENSMUST00000121223 495 ntBASIC8.11□□□□□ -1.11
Shmt1P50431 H2-Ea-ps-201ENSMUST00000134042 686 ntBASIC8.11□□□□□ -1.11
Shmt1P50431 Gm15133-201ENSMUST00000139019 843 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Shmt1P50431 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Shmt1P50431 Gm9141-201ENSMUST00000159355 1007 ntBASIC8.11□□□□□ -1.11
Shmt1P50431 Gm5300-201ENSMUST00000182201 1003 ntBASIC8.11□□□□□ -1.11
Shmt1P50431 Gm5835-201ENSMUST00000185806 1270 ntBASIC8.11□□□□□ -1.11
Shmt1P50431 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Shmt1P50431 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC8.11□□□□□ -1.11
Shmt1P50431 Gm28114-201ENSMUST00000187232 379 ntBASIC8.11□□□□□ -1.11
Shmt1P50431 Gm37729-201ENSMUST00000194761 1172 ntBASIC8.11□□□□□ -1.11
Shmt1P50431 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Shmt1P50431 4633401B06Rik-201ENSMUST00000198169 1073 ntBASIC8.11□□□□□ -1.11
Shmt1P50431 Gm44036-201ENSMUST00000204551 336 ntTSL 3 BASIC8.11□□□□□ -1.11
Shmt1P50431 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC8.11□□□□□ -1.11
Shmt1P50431 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Shmt1P50431 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC8.11□□□□□ -1.11
Shmt1P50431 Gm45925-202ENSMUST00000219904 1136 ntBASIC8.11□□□□□ -1.11
Shmt1P50431 Gm9249-201ENSMUST00000221420 578 ntBASIC8.11□□□□□ -1.11
Shmt1P50431 Cst11-201ENSMUST00000028934 615 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Shmt1P50431 H2-M11-201ENSMUST00000041964 1006 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Shmt1P50431 Rag1-201ENSMUST00000078494 6608 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Shmt1P50431 Ppargc1a-205ENSMUST00000196968 2754 ntTSL 5 BASIC8.11□□□□□ -1.11
Shmt1P50431 Acsl4-202ENSMUST00000112903 4956 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Shmt1P50431 Acsl4-203ENSMUST00000112904 4959 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Shmt1P50431 Zkscan7-201ENSMUST00000063980 4722 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Shmt1P50431 Pak7-202ENSMUST00000077200 3957 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Shmt1P50431 Gm29154-258ENSMUST00000217560 1733 ntTSL 5 BASIC8.11□□□□□ -1.11
Shmt1P50431 Ptprj-201ENSMUST00000111493 7124 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Shmt1P50431 4831440D22Rik-201ENSMUST00000211287 2929 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Shmt1P50431 D830032E09Rik-201ENSMUST00000186875 2193 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Shmt1P50431 Pld1-202ENSMUST00000120834 4849 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Shmt1P50431 Dlgap2-201ENSMUST00000043279 3580 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Shmt1P50431 Rbpj-201ENSMUST00000037618 5459 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Shmt1P50431 Fam129a-205ENSMUST00000148810 6531 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Shmt1P50431 Gm42595-201ENSMUST00000196771 1607 ntBASIC8.11□□□□□ -1.11
Shmt1P50431 Gm12258-201ENSMUST00000093768 2524 ntBASIC8.1□□□□□ -1.11
Shmt1P50431 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Shmt1P50431 1700029M20Rik-203ENSMUST00000153347 2963 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Shmt1P50431 Kng2-202ENSMUST00000100046 2294 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Shmt1P50431 Gm20731-201ENSMUST00000193462 2288 ntBASIC8.1□□□□□ -1.11
Shmt1P50431 Cpb1-201ENSMUST00000011607 2718 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Shmt1P50431 Gm44178-201ENSMUST00000205229 2930 ntBASIC8.1□□□□□ -1.11
Shmt1P50431 Rapgef6-210ENSMUST00000207429 5164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Shmt1P50431 A130012E19Rik-201ENSMUST00000218674 3135 ntBASIC8.1□□□□□ -1.11
Shmt1P50431 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms