Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Arhgap26-218ENSMUST00000187912 312 ntTSL 5 BASIC7.73□□□□□ -1.17
HttP42859 Gm18797-201ENSMUST00000190809 1174 ntBASIC7.73□□□□□ -1.17
HttP42859 Gm43576-201ENSMUST00000197937 871 ntBASIC7.73□□□□□ -1.17
HttP42859 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC7.73□□□□□ -1.17
HttP42859 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
HttP42859 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC7.73□□□□□ -1.17
HttP42859 CT009600.1-201ENSMUST00000228771 337 ntBASIC7.73□□□□□ -1.17
HttP42859 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
HttP42859 Nsun3-201ENSMUST00000063089 3813 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HttP42859 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HttP42859 L3mbtl3-202ENSMUST00000105519 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
HttP42859 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HttP42859 Oas3-201ENSMUST00000044833 4720 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HttP42859 Rpgr-206ENSMUST00000115534 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
HttP42859 Zfp944-201ENSMUST00000115535 2784 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
HttP42859 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
HttP42859 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
HttP42859 Gm18726-201ENSMUST00000218175 2010 ntBASIC7.73□□□□□ -1.17
HttP42859 Gm44745-201ENSMUST00000206563 2723 ntBASIC7.73□□□□□ -1.17
HttP42859 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HttP42859 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
HttP42859 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
HttP42859 Stard13-201ENSMUST00000062015 5526 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
HttP42859 Kit-201ENSMUST00000005815 5214 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
HttP42859 1700006J14Rik-203ENSMUST00000160091 2629 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HttP42859 Pbdc1-201ENSMUST00000033577 2638 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HttP42859 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
HttP42859 Wdr76-202ENSMUST00000099473 2315 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HttP42859 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HttP42859 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HttP42859 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HttP42859 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC7.73□□□□□ -1.17
HttP42859 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
HttP42859 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HttP42859 Gm24286-201ENSMUST00000157632 128 ntBASIC7.73□□□□□ -1.17
HttP42859 Gm27039-201ENSMUST00000182438 962 ntBASIC7.73□□□□□ -1.17
HttP42859 Mocs2-212ENSMUST00000184214 551 ntTSL 3 BASIC7.73□□□□□ -1.17
HttP42859 Gm8930-201ENSMUST00000201693 768 ntBASIC7.73□□□□□ -1.17
HttP42859 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HttP42859 2310015D24Rik-202ENSMUST00000187920 2917 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HttP42859 Gm6313-202ENSMUST00000150112 2562 ntTSL 2 BASIC7.73□□□□□ -1.17
HttP42859 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HttP42859 Myo1c-202ENSMUST00000102504 4659 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HttP42859 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC7.73□□□□□ -1.17
HttP42859 Gm42822-201ENSMUST00000200507 1529 ntBASIC7.73□□□□□ -1.17
HttP42859 Sp1-204ENSMUST00000165924 4081 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
HttP42859 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC7.73□□□□□ -1.17
HttP42859 Gm21719-202ENSMUST00000189073 1358 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
HttP42859 Gm11298-201ENSMUST00000120503 1799 ntBASIC7.73□□□□□ -1.17
HttP42859 Olfr78-202ENSMUST00000168007 1962 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HttP42859 Cnot2-204ENSMUST00000164088 2618 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
HttP42859 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
HttP42859 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
HttP42859 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
HttP42859 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
HttP42859 Dpp6-203ENSMUST00000120555 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
HttP42859 Tex9-201ENSMUST00000085358 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
HttP42859 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
HttP42859 Gm44581-201ENSMUST00000206227 1693 ntTSL 5 BASIC7.72□□□□□ -1.17
HttP42859 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC7.72□□□□□ -1.17
HttP42859 Gm16056-201ENSMUST00000119293 135 ntBASIC7.72□□□□□ -1.17
HttP42859 Gm22210-201ENSMUST00000158101 144 ntBASIC7.72□□□□□ -1.17
HttP42859 Gm43725-201ENSMUST00000200122 369 ntBASIC7.72□□□□□ -1.17
HttP42859 Gm43867-201ENSMUST00000203860 525 ntBASIC7.72□□□□□ -1.17
HttP42859 AC111010.1-203ENSMUST00000227287 1548 ntBASIC7.72□□□□□ -1.17
HttP42859 Scml4-202ENSMUST00000105494 4166 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
HttP42859 Gm8872-201ENSMUST00000197475 1341 ntBASIC7.72□□□□□ -1.17
HttP42859 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
HttP42859 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HttP42859 Gm28649-201ENSMUST00000189153 1581 ntBASIC7.72□□□□□ -1.17
HttP42859 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HttP42859 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HttP42859 Prps2-201ENSMUST00000026839 3699 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HttP42859 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
HttP42859 Lima1-202ENSMUST00000109024 4109 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
HttP42859 4831440D22Rik-201ENSMUST00000211287 2929 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
HttP42859 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC7.72□□□□□ -1.17
HttP42859 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HttP42859 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HttP42859 Gm5611-201ENSMUST00000164523 852 ntBASIC7.72□□□□□ -1.17
HttP42859 Gm37070-201ENSMUST00000193272 460 ntBASIC7.72□□□□□ -1.17
HttP42859 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HttP42859 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HttP42859 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HttP42859 n-R5s97-201ENSMUST00000082585 113 ntBASIC7.72□□□□□ -1.17
HttP42859 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
HttP42859 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
HttP42859 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC7.72□□□□□ -1.17
HttP42859 Mmp27-201ENSMUST00000120900 1662 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
HttP42859 Psmb11-201ENSMUST00000097177 4247 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
HttP42859 Ccdc114-203ENSMUST00000210602 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
HttP42859 Gm7134-201ENSMUST00000122296 2406 ntBASIC7.72□□□□□ -1.17
HttP42859 Gm42514-201ENSMUST00000196636 1832 ntBASIC7.72□□□□□ -1.17
HttP42859 B430306N03Rik-201ENSMUST00000049614 3996 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HttP42859 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
HttP42859 Cherp-201ENSMUST00000079510 3713 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
HttP42859 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC7.72□□□□□ -1.17
HttP42859 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC7.72□□□□□ -1.17
HttP42859 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC7.72□□□□□ -1.17
HttP42859 Gm7492-201ENSMUST00000201745 725 ntBASIC7.72□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms