Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC8.93□□□□□ -0.98
Traf1P39428 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Traf1P39428 Zc4h2-201ENSMUST00000044382 2219 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Traf1P39428 Adgrl2-220ENSMUST00000200543 5509 ntAPPRIS ALT1 TSL 5 BASIC8.93□□□□□ -0.98
Traf1P39428 Gm26920-201ENSMUST00000182746 2374 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
Traf1P39428 Tbc1d24-216ENSMUST00000202925 4216 ntTSL 5 BASIC8.93□□□□□ -0.98
Traf1P39428 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Traf1P39428 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Traf1P39428 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Traf1P39428 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Traf1P39428 Gm24986-201ENSMUST00000104452 132 ntBASIC8.93□□□□□ -0.98
Traf1P39428 Gm26429-201ENSMUST00000104829 110 ntBASIC8.93□□□□□ -0.98
Traf1P39428 Lrrc51-204ENSMUST00000106964 872 ntTSL 2 BASIC8.93□□□□□ -0.98
Traf1P39428 Gm8624-201ENSMUST00000118083 432 ntBASIC8.93□□□□□ -0.98
Traf1P39428 Dmrtc1a-203ENSMUST00000120808 1061 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Traf1P39428 Gm12642-201ENSMUST00000121098 876 ntBASIC8.93□□□□□ -0.98
Traf1P39428 Gm12665-201ENSMUST00000126063 541 ntTSL 3 BASIC8.93□□□□□ -0.98
Traf1P39428 Cd48-201ENSMUST00000015499 922 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Traf1P39428 Fbxl12-210ENSMUST00000155301 476 ntTSL 3 BASIC8.93□□□□□ -0.98
Traf1P39428 Mir1983-201ENSMUST00000157523 132 ntBASIC8.93□□□□□ -0.98
Traf1P39428 Gm24050-201ENSMUST00000158623 290 ntBASIC8.93□□□□□ -0.98
Traf1P39428 Gm10804-202ENSMUST00000162565 867 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Traf1P39428 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Traf1P39428 Gm20396-201ENSMUST00000173358 745 ntBASIC8.93□□□□□ -0.98
Traf1P39428 Gm28894-201ENSMUST00000185214 615 ntBASIC8.93□□□□□ -0.98
Traf1P39428 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC8.93□□□□□ -0.98
Traf1P39428 Gm38203-201ENSMUST00000191815 245 ntBASIC8.93□□□□□ -0.98
Traf1P39428 4933403L11Rik-201ENSMUST00000193857 1121 ntBASIC8.93□□□□□ -0.98
Traf1P39428 Gm37369-201ENSMUST00000194179 615 ntBASIC8.93□□□□□ -0.98
Traf1P39428 Gm43553-201ENSMUST00000200900 685 ntBASIC8.93□□□□□ -0.98
Traf1P39428 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC8.93□□□□□ -0.98
Traf1P39428 Mphosph6-201ENSMUST00000034303 1068 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Traf1P39428 Olfr1113-201ENSMUST00000079966 981 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Traf1P39428 Ighv1-13-201ENSMUST00000095364 294 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Traf1P39428 Zfp825-202ENSMUST00000202645 1406 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Traf1P39428 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Traf1P39428 Tex21-201ENSMUST00000021453 2137 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Traf1P39428 Gtdc1-201ENSMUST00000049051 2197 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Traf1P39428 Gm14244-201ENSMUST00000155688 2410 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Traf1P39428 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Traf1P39428 Pbdc1-201ENSMUST00000033577 2638 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Traf1P39428 AC061963.2-201ENSMUST00000213541 2739 ntBASIC8.93□□□□□ -0.98
Traf1P39428 Wdr27-206ENSMUST00000228330 2759 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Traf1P39428 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Traf1P39428 Phc3-210ENSMUST00000177992 2920 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Traf1P39428 Armcx3-201ENSMUST00000081834 3327 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Traf1P39428 Acsl1-203ENSMUST00000110372 3429 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Traf1P39428 Gm36757-201ENSMUST00000221818 3556 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Traf1P39428 Unc45b-202ENSMUST00000108160 4152 ntAPPRIS ALT1 TSL 5 BASIC8.93□□□□□ -0.98
Traf1P39428 Arhgap12-212ENSMUST00000182559 4265 ntAPPRIS P4 TSL 1 (best) BASIC8.93□□□□□ -0.98
Traf1P39428 Slc12a3-205ENSMUST00000212134 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Traf1P39428 Pkd1l1-203ENSMUST00000178195 6213 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Traf1P39428 Kif5a-202ENSMUST00000217895 3996 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Traf1P39428 Gpr35-201ENSMUST00000027489 3270 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Traf1P39428 Muc6-203ENSMUST00000190907 8757 ntAPPRIS P5 TSL 5 BASIC8.92□□□□□ -0.98
Traf1P39428 D3Ertd254e-202ENSMUST00000197653 6689 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Traf1P39428 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Traf1P39428 Gm37534-201ENSMUST00000194483 5222 ntBASIC8.92□□□□□ -0.98
Traf1P39428 Slc51a-201ENSMUST00000042042 1600 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Traf1P39428 Cpne4-203ENSMUST00000098443 1421 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Traf1P39428 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Traf1P39428 Gm13552-201ENSMUST00000118837 417 ntBASIC8.92□□□□□ -0.98
Traf1P39428 Gm15192-201ENSMUST00000121005 293 ntBASIC8.92□□□□□ -0.98
Traf1P39428 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC8.92□□□□□ -0.98
Traf1P39428 Tvp23bos-201ENSMUST00000148598 1011 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Traf1P39428 Gm22847-201ENSMUST00000157707 105 ntBASIC8.92□□□□□ -0.98
Traf1P39428 Gm24530-201ENSMUST00000157948 288 ntBASIC8.92□□□□□ -0.98
Traf1P39428 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Traf1P39428 Clec2i-205ENSMUST00000162666 1091 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Traf1P39428 Gm20452-201ENSMUST00000174686 513 ntBASIC8.92□□□□□ -0.98
Traf1P39428 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Traf1P39428 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Traf1P39428 Gm5300-201ENSMUST00000182201 1003 ntBASIC8.92□□□□□ -0.98
Traf1P39428 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Traf1P39428 Gm28087-201ENSMUST00000189195 767 ntTSL 5 BASIC8.92□□□□□ -0.98
Traf1P39428 Gm43040-201ENSMUST00000202399 558 ntBASIC8.92□□□□□ -0.98
Traf1P39428 Gm34701-201ENSMUST00000204213 849 ntBASIC8.92□□□□□ -0.98
Traf1P39428 AC162176.1-201ENSMUST00000216490 618 ntBASIC8.92□□□□□ -0.98
Traf1P39428 RMST_1.1-213ENSMUST00000220288 792 ntTSL 5 BASIC8.92□□□□□ -0.98
Traf1P39428 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC8.92□□□□□ -0.98
Traf1P39428 AC154838.3-201ENSMUST00000228876 965 ntBASIC8.92□□□□□ -0.98
Traf1P39428 Ropn1-201ENSMUST00000023530 875 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Traf1P39428 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Traf1P39428 Synj2bp-204ENSMUST00000164431 3305 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Traf1P39428 Eftud2-201ENSMUST00000021306 3324 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Traf1P39428 Gas2l3-201ENSMUST00000099374 6748 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Traf1P39428 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Traf1P39428 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Traf1P39428 Rgr-201ENSMUST00000022338 4240 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Traf1P39428 2010310C07Rik-201ENSMUST00000187172 2226 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Traf1P39428 AC158986.1-201ENSMUST00000228391 3455 ntBASIC8.92□□□□□ -0.98
Traf1P39428 BC049715-203ENSMUST00000203499 2057 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Traf1P39428 Bmpr1a-202ENSMUST00000165280 1945 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Traf1P39428 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Traf1P39428 Smarcal1-201ENSMUST00000047615 3059 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Traf1P39428 CT009711.1-201ENSMUST00000223992 3040 ntBASIC8.91□□□□□ -0.98
Traf1P39428 Slc17a3-202ENSMUST00000091698 1759 ntTSL 5 BASIC8.91□□□□□ -0.98
Traf1P39428 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Traf1P39428 Sos2-203ENSMUST00000182396 3963 ntTSL 5 BASIC8.91□□□□□ -0.98
Traf1P39428 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC8.91□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms