Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Usp4P35123 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Usp4P35123 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Usp4P35123 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Usp4P35123 Ifit3-201ENSMUST00000102825 1745 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Usp4P35123 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Usp4P35123 Mtbp-204ENSMUST00000169667 2570 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Usp4P35123 Tmem177-201ENSMUST00000037906 3341 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Usp4P35123 Tbx20-201ENSMUST00000052946 9091 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Usp4P35123 Olfr802-202ENSMUST00000203785 5535 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Usp4P35123 Epg5-201ENSMUST00000044622 9672 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Usp4P35123 Pi4ka-201ENSMUST00000036161 6431 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Usp4P35123 Kyat3-201ENSMUST00000044392 4206 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Usp4P35123 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Usp4P35123 AC132384.7-201ENSMUST00000220198 1391 ntBASIC8.14□□□□□ -1.11
Usp4P35123 Ryr2-202ENSMUST00000170156 16813 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Usp4P35123 Ryr2-201ENSMUST00000021750 16814 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Usp4P35123 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Usp4P35123 Zfp438-201ENSMUST00000063989 3209 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Usp4P35123 Olfr1128-201ENSMUST00000102624 936 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Usp4P35123 Gm13683-201ENSMUST00000119497 1076 ntBASIC8.14□□□□□ -1.11
Usp4P35123 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Usp4P35123 Gm15343-201ENSMUST00000136382 640 ntTSL 3 BASIC8.14□□□□□ -1.11
Usp4P35123 Gm13857-202ENSMUST00000141091 617 ntTSL 3 BASIC8.14□□□□□ -1.11
Usp4P35123 Platr14-205ENSMUST00000146553 770 ntTSL 2 BASIC8.14□□□□□ -1.11
Usp4P35123 Gm22847-201ENSMUST00000157707 105 ntBASIC8.14□□□□□ -1.11
Usp4P35123 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC8.14□□□□□ -1.11
Usp4P35123 Ang-ps1-201ENSMUST00000162314 436 ntBASIC8.14□□□□□ -1.11
Usp4P35123 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC8.14□□□□□ -1.11
Usp4P35123 Sfta2-202ENSMUST00000174521 649 ntTSL 3 BASIC8.14□□□□□ -1.11
Usp4P35123 Gm18828-201ENSMUST00000180475 857 ntBASIC8.14□□□□□ -1.11
Usp4P35123 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC8.14□□□□□ -1.11
Usp4P35123 2310005E17Rik-201ENSMUST00000186644 1187 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Usp4P35123 Gm29439-201ENSMUST00000189996 509 ntTSL 3 BASIC8.14□□□□□ -1.11
Usp4P35123 Avpr1b-202ENSMUST00000190410 623 ntTSL 5 BASIC8.14□□□□□ -1.11
Usp4P35123 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Usp4P35123 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC8.14□□□□□ -1.11
Usp4P35123 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC8.14□□□□□ -1.11
Usp4P35123 Gm43235-201ENSMUST00000200121 297 ntBASIC8.14□□□□□ -1.11
Usp4P35123 Gm42959-201ENSMUST00000202184 212 ntBASIC8.14□□□□□ -1.11
Usp4P35123 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Usp4P35123 Gm45155-201ENSMUST00000207365 596 ntTSL 2 BASIC8.14□□□□□ -1.11
Usp4P35123 4833412C05Rik-202ENSMUST00000208257 850 ntTSL 3 BASIC8.14□□□□□ -1.11
Usp4P35123 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC8.14□□□□□ -1.11
Usp4P35123 Gm21089-201ENSMUST00000215843 325 ntBASIC8.14□□□□□ -1.11
Usp4P35123 AC133189.3-201ENSMUST00000226269 878 ntBASIC8.14□□□□□ -1.11
Usp4P35123 Olfr1055-201ENSMUST00000099894 1182 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Usp4P35123 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Usp4P35123 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Usp4P35123 Pm20d1-202ENSMUST00000112393 6900 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Usp4P35123 Apbb2-204ENSMUST00000159786 6333 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Usp4P35123 Cfap57-201ENSMUST00000071972 4020 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Usp4P35123 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Usp4P35123 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Usp4P35123 Gm14373-201ENSMUST00000122467 2158 ntBASIC8.14□□□□□ -1.11
Usp4P35123 Lilra5-201ENSMUST00000117550 2109 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Usp4P35123 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC8.14□□□□□ -1.11
Usp4P35123 Gm28938-201ENSMUST00000187029 1495 ntTSL 5 BASIC8.13□□□□□ -1.11
Usp4P35123 Gm29399-202ENSMUST00000187292 1495 ntTSL 5 BASIC8.13□□□□□ -1.11
Usp4P35123 Gm29203-201ENSMUST00000187355 1495 ntTSL 5 BASIC8.13□□□□□ -1.11
Usp4P35123 Gm29027-202ENSMUST00000187571 1495 ntTSL 5 BASIC8.13□□□□□ -1.11
Usp4P35123 Gm28249-203ENSMUST00000190011 1495 ntTSL 5 BASIC8.13□□□□□ -1.11
Usp4P35123 Gm30045-202ENSMUST00000193438 1495 ntTSL 5 BASIC8.13□□□□□ -1.11
Usp4P35123 Gm32181-202ENSMUST00000194268 1495 ntTSL 5 BASIC8.13□□□□□ -1.11
Usp4P35123 Gm36345-202ENSMUST00000194949 1495 ntTSL 5 BASIC8.13□□□□□ -1.11
Usp4P35123 Gm31422-203ENSMUST00000195198 1495 ntTSL 5 BASIC8.13□□□□□ -1.11
Usp4P35123 Gm30705-203ENSMUST00000195660 1495 ntTSL 5 BASIC8.13□□□□□ -1.11
Usp4P35123 Pramef6-201ENSMUST00000081645 1487 ntAPPRIS P2 TSL 5 BASIC8.13□□□□□ -1.11
Usp4P35123 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Usp4P35123 Ptprj-201ENSMUST00000111493 7124 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Usp4P35123 AC121942.3-201ENSMUST00000225768 1436 ntBASIC8.13□□□□□ -1.11
Usp4P35123 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC8.13□□□□□ -1.11
Usp4P35123 Tspan8-203ENSMUST00000179196 1381 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Usp4P35123 Gm34184-201ENSMUST00000216477 2713 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Usp4P35123 Zfp661-202ENSMUST00000110366 4912 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Usp4P35123 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Usp4P35123 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Usp4P35123 Zfp467-207ENSMUST00000114563 463 ntTSL 5 BASIC8.13□□□□□ -1.11
Usp4P35123 Gm7091-201ENSMUST00000116438 586 ntBASIC8.13□□□□□ -1.11
Usp4P35123 Gm26474-201ENSMUST00000116762 122 ntBASIC8.13□□□□□ -1.11
Usp4P35123 Gm13674-201ENSMUST00000121276 823 ntBASIC8.13□□□□□ -1.11
Usp4P35123 Gm5270-201ENSMUST00000121506 1002 ntBASIC8.13□□□□□ -1.11
Usp4P35123 Gm15530-201ENSMUST00000122206 555 ntBASIC8.13□□□□□ -1.11
Usp4P35123 Snhg17-202ENSMUST00000138592 342 ntTSL 2 BASIC8.13□□□□□ -1.11
Usp4P35123 Gm11722-201ENSMUST00000138702 534 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Usp4P35123 1810062O18Rik-204ENSMUST00000141265 751 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Usp4P35123 Gm14024-201ENSMUST00000141964 560 ntTSL 2 BASIC8.13□□□□□ -1.11
Usp4P35123 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC8.13□□□□□ -1.11
Usp4P35123 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Usp4P35123 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC8.13□□□□□ -1.11
Usp4P35123 Milr1-208ENSMUST00000183111 982 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Usp4P35123 Calm5-201ENSMUST00000183198 589 ntBASIC8.13□□□□□ -1.11
Usp4P35123 1600019K03Rik-201ENSMUST00000187829 477 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Usp4P35123 Gm2087-201ENSMUST00000188217 366 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Usp4P35123 Gm37662-201ENSMUST00000195649 667 ntTSL 2 BASIC8.13□□□□□ -1.11
Usp4P35123 Gm43743-201ENSMUST00000197898 697 ntBASIC8.13□□□□□ -1.11
Usp4P35123 4930448I18Rik-201ENSMUST00000197958 736 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Usp4P35123 Olfr320-201ENSMUST00000204718 928 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Usp4P35123 E230032D23Rik-203ENSMUST00000208797 856 ntBASIC8.13□□□□□ -1.11
Usp4P35123 Gm45800-201ENSMUST00000210331 700 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms