Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm29156-201ENSMUST00000187764 499 ntBASIC8.85□□□□□ -0.99
Col1a1P11087 Gm37191-201ENSMUST00000193346 388 ntBASIC8.85□□□□□ -0.99
Col1a1P11087 Gm43595-201ENSMUST00000196464 1071 ntBASIC8.85□□□□□ -0.99
Col1a1P11087 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC8.85□□□□□ -0.99
Col1a1P11087 Gm45900-201ENSMUST00000211879 409 ntBASIC8.85□□□□□ -0.99
Col1a1P11087 AC116596.2-203ENSMUST00000227345 731 ntBASIC8.85□□□□□ -0.99
Col1a1P11087 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col1a1P11087 4930542C16Rik-201ENSMUST00000062438 1090 ntTSL 2 BASIC8.85□□□□□ -0.99
Col1a1P11087 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Col1a1P11087 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Col1a1P11087 Gm43080-201ENSMUST00000199006 2643 ntBASIC8.85□□□□□ -0.99
Col1a1P11087 Enah-211ENSMUST00000193703 11229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col1a1P11087 Olfr1199-204ENSMUST00000213138 2657 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Col1a1P11087 Gm7842-201ENSMUST00000217691 1379 ntBASIC8.85□□□□□ -0.99
Col1a1P11087 Ap3b2-201ENSMUST00000082090 3804 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col1a1P11087 Nos1-202ENSMUST00000102557 4591 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Col1a1P11087 Rimbp2-201ENSMUST00000111346 4264 ntAPPRIS P3 TSL 5 BASIC8.85□□□□□ -0.99
Col1a1P11087 Supt7l-204ENSMUST00000201769 2548 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col1a1P11087 F10-202ENSMUST00000063820 2503 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col1a1P11087 Rbms3-212ENSMUST00000174868 2164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col1a1P11087 Gm37159-201ENSMUST00000192720 3605 ntBASIC8.85□□□□□ -0.99
Col1a1P11087 Sidt1-204ENSMUST00000127567 2901 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Col1a1P11087 Alpk1-201ENSMUST00000029662 4795 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Col1a1P11087 Cd300lb-203ENSMUST00000149663 2641 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Col1a1P11087 Olfr156-204ENSMUST00000215406 1850 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Col1a1P11087 Olfr225-202ENSMUST00000213169 2658 ntAPPRIS P5 TSL 5 BASIC8.85□□□□□ -0.99
Col1a1P11087 Zc3h12c-201ENSMUST00000165519 6133 ntAPPRIS P2 TSL 5 BASIC8.85□□□□□ -0.99
Col1a1P11087 Elmo2-205ENSMUST00000103091 4695 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col1a1P11087 Rian-202ENSMUST00000181253 2355 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Col1a1P11087 Ano7-202ENSMUST00000186641 3984 ntAPPRIS P3 TSL 5 BASIC8.84□□□□□ -0.99
Col1a1P11087 1700074P13Rik-201ENSMUST00000031935 1647 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col1a1P11087 Nrxn3-210ENSMUST00000167887 3303 ntTSL 5 BASIC8.84□□□□□ -0.99
Col1a1P11087 Mical2-201ENSMUST00000037991 3352 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col1a1P11087 Gm26144-201ENSMUST00000104475 132 ntBASIC8.84□□□□□ -0.99
Col1a1P11087 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC8.84□□□□□ -0.99
Col1a1P11087 Svs3a-201ENSMUST00000017147 1191 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col1a1P11087 Gm29143-201ENSMUST00000189462 201 ntBASIC8.84□□□□□ -0.99
Col1a1P11087 Gm1969-201ENSMUST00000198125 1220 ntBASIC8.84□□□□□ -0.99
Col1a1P11087 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC8.84□□□□□ -0.99
Col1a1P11087 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC8.84□□□□□ -0.99
Col1a1P11087 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Col1a1P11087 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC8.84□□□□□ -0.99
Col1a1P11087 AC148328.2-201ENSMUST00000216960 262 ntBASIC8.84□□□□□ -0.99
Col1a1P11087 CT030238.3-201ENSMUST00000227352 875 ntBASIC8.84□□□□□ -0.99
Col1a1P11087 AC113031.6-202ENSMUST00000228468 1145 ntBASIC8.84□□□□□ -0.99
Col1a1P11087 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Col1a1P11087 Prdm10-201ENSMUST00000074510 3408 ntAPPRIS P2 TSL 5 BASIC8.84□□□□□ -0.99
Col1a1P11087 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC8.84□□□□□ -0.99
Col1a1P11087 Smarcal1-201ENSMUST00000047615 3059 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col1a1P11087 Clip4-201ENSMUST00000024854 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col1a1P11087 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC8.84□□□□□ -0.99
Col1a1P11087 Fancl-201ENSMUST00000004120 2724 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col1a1P11087 Efcab6-207ENSMUST00000156187 5012 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col1a1P11087 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Col1a1P11087 Ston1-201ENSMUST00000064035 3287 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
Col1a1P11087 Mrpl48-201ENSMUST00000064334 1865 ntBASIC8.84□□□□□ -0.99
Col1a1P11087 Wipf3-206ENSMUST00000172046 4204 ntAPPRIS P4 TSL 5 BASIC8.84□□□□□ -0.99
Col1a1P11087 Ccdc114-203ENSMUST00000210602 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col1a1P11087 9530053A07Rik-204ENSMUST00000150948 7895 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Col1a1P11087 Dlgap5-201ENSMUST00000043296 2964 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col1a1P11087 A730085K08Rik-201ENSMUST00000177015 2013 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Col1a1P11087 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Col1a1P11087 Gm32647-202ENSMUST00000206579 3147 ntTSL 3 BASIC8.84□□□□□ -0.99
Col1a1P11087 Abce1-201ENSMUST00000080536 3793 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col1a1P11087 Myo5c-201ENSMUST00000036555 6727 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Col1a1P11087 Gm45903-201ENSMUST00000212891 2898 ntTSL 5 BASIC8.84□□□□□ -0.99
Col1a1P11087 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Col1a1P11087 Erc2-201ENSMUST00000090302 6083 ntTSL 1 (best) BASIC8.84□□□□□ -1
Col1a1P11087 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC8.83□□□□□ -1
Col1a1P11087 Gm25311-201ENSMUST00000104136 132 ntBASIC8.83□□□□□ -1
Col1a1P11087 Dab1-201ENSMUST00000106826 996 ntTSL 1 (best) BASIC8.83□□□□□ -1
Col1a1P11087 Spata48-202ENSMUST00000109678 753 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Col1a1P11087 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC8.83□□□□□ -1
Col1a1P11087 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC8.83□□□□□ -1
Col1a1P11087 Gm25505-201ENSMUST00000157220 246 ntBASIC8.83□□□□□ -1
Col1a1P11087 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC8.83□□□□□ -1
Col1a1P11087 Gm23187-201ENSMUST00000175746 86 ntBASIC8.83□□□□□ -1
Col1a1P11087 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC8.83□□□□□ -1
Col1a1P11087 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC8.83□□□□□ -1
Col1a1P11087 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC8.83□□□□□ -1
Col1a1P11087 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC8.83□□□□□ -1
Col1a1P11087 AC079644.2-201ENSMUST00000220581 322 ntBASIC8.83□□□□□ -1
Col1a1P11087 AC124489.3-201ENSMUST00000224037 278 ntBASIC8.83□□□□□ -1
Col1a1P11087 AC091237.1-201ENSMUST00000224911 637 ntBASIC8.83□□□□□ -1
Col1a1P11087 AC124489.1-201ENSMUST00000225852 526 ntBASIC8.83□□□□□ -1
Col1a1P11087 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Col1a1P11087 Net1-202ENSMUST00000099946 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Col1a1P11087 Oas1e-203ENSMUST00000201172 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Col1a1P11087 Birc5-202ENSMUST00000093906 3334 ntTSL 1 (best) BASIC8.83□□□□□ -1
Col1a1P11087 Ankrd27-206ENSMUST00000190503 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Col1a1P11087 Pofut1-206ENSMUST00000123487 4143 ntTSL 2 BASIC8.83□□□□□ -1
Col1a1P11087 Gm43890-201ENSMUST00000203437 2799 ntBASIC8.83□□□□□ -1
Col1a1P11087 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Col1a1P11087 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Col1a1P11087 Mybbp1a-201ENSMUST00000045633 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Col1a1P11087 9330104G04Rik-201ENSMUST00000181501 2242 ntTSL 1 (best) BASIC8.83□□□□□ -1
Col1a1P11087 AC122426.1-201ENSMUST00000214736 2235 ntBASIC8.83□□□□□ -1
Col1a1P11087 Rrp8-202ENSMUST00000098148 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Col1a1P11087 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Col1a1P11087 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC8.83□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms