Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Mmp27-201ENSMUST00000120900 1662 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Itgam-201ENSMUST00000064821 4682 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Catsperg1-202ENSMUST00000069861 2251 ntTSL 2 BASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col4a6B1AVK5 B230323A14Rik-201ENSMUST00000180488 2864 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Gm25311-201ENSMUST00000104136 132 ntBASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Gm5611-201ENSMUST00000164523 852 ntBASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Znrf1-210ENSMUST00000173781 337 ntTSL 3 BASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Gm27186-201ENSMUST00000184223 307 ntBASIC7.73□□□□□ -1.17
Col4a6B1AVK5 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Gm29663-201ENSMUST00000186962 853 ntBASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Gm37620-201ENSMUST00000192910 501 ntBASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC7.73□□□□□ -1.17
Col4a6B1AVK5 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Gm35638-201ENSMUST00000220724 652 ntBASIC7.73□□□□□ -1.17
Col4a6B1AVK5 AC154627.1-201ENSMUST00000228799 1286 ntBASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Col4a6B1AVK5 H6pd-202ENSMUST00000084117 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Gm36694-201ENSMUST00000205855 2719 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Coq8a-217ENSMUST00000170472 3928 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Stat1-206ENSMUST00000186857 4241 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Kpna3-201ENSMUST00000022496 4069 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Olfr1219-202ENSMUST00000213724 5669 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Trim38-203ENSMUST00000226039 1999 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Olfr522-201ENSMUST00000050585 4766 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Col4a6B1AVK5 F10-202ENSMUST00000063820 2503 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Gpr50-201ENSMUST00000070449 3069 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Luc7l-202ENSMUST00000114976 4934 ntAPPRIS P4 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Arhgef9-210ENSMUST00000182001 4622 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Gm28758-201ENSMUST00000186123 2167 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Gm7972-203ENSMUST00000209180 2184 ntTSL 3 BASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Palb2-202ENSMUST00000098068 3750 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Arhgap12-212ENSMUST00000182559 4265 ntAPPRIS P4 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col4a6B1AVK5 CT030185.2-201ENSMUST00000222614 1310 ntBASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Gm37535-201ENSMUST00000194442 2365 ntBASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Rab7b-202ENSMUST00000064679 4498 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Scfd2-201ENSMUST00000072857 3672 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Sulf1-203ENSMUST00000180062 4636 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Itgam-202ENSMUST00000106240 3325 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Gm22927-201ENSMUST00000104268 131 ntBASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Gm25877-201ENSMUST00000104326 129 ntBASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Gm7494-201ENSMUST00000121248 441 ntBASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Gm8183-201ENSMUST00000183134 980 ntBASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Mir378d-201ENSMUST00000184232 110 ntBASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Gm1969-201ENSMUST00000198125 1220 ntBASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Col4a6B1AVK5 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Clcn7-201ENSMUST00000040729 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Gm18726-201ENSMUST00000218175 2010 ntBASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Col4a5-201ENSMUST00000112930 6285 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Tars2-203ENSMUST00000098857 3228 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Acsm5-201ENSMUST00000066465 2981 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col4a6B1AVK5 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Col4a6B1AVK5 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col4a6B1AVK5 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Col4a6B1AVK5 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Col4a6B1AVK5 Stat1-205ENSMUST00000186574 2834 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col4a6B1AVK5 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Col4a6B1AVK5 Gm5402-201ENSMUST00000119588 1618 ntBASIC7.72□□□□□ -1.17
Col4a6B1AVK5 Hmgxb4-201ENSMUST00000041759 4191 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col4a6B1AVK5 Gm36993-201ENSMUST00000192983 2980 ntBASIC7.72□□□□□ -1.17
Col4a6B1AVK5 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col4a6B1AVK5 Htr1d-201ENSMUST00000088677 2904 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col4a6B1AVK5 Adgrf2-201ENSMUST00000113614 3284 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col4a6B1AVK5 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col4a6B1AVK5 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col4a6B1AVK5 St6galnac1-201ENSMUST00000009732 2392 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col4a6B1AVK5 Gm20796-201ENSMUST00000180355 5838 ntBASIC7.72□□□□□ -1.17
Col4a6B1AVK5 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col4a6B1AVK5 Gm4342-201ENSMUST00000118982 367 ntBASIC7.72□□□□□ -1.17
Col4a6B1AVK5 Gm13282-201ENSMUST00000121577 545 ntBASIC7.72□□□□□ -1.17
Col4a6B1AVK5 Gm22223-201ENSMUST00000157360 125 ntBASIC7.72□□□□□ -1.17
Col4a6B1AVK5 Gm25556-201ENSMUST00000158077 144 ntBASIC7.72□□□□□ -1.17
Col4a6B1AVK5 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Col4a6B1AVK5 Gm3326-201ENSMUST00000164656 1043 ntBASIC7.72□□□□□ -1.17
Col4a6B1AVK5 Gm28416-201ENSMUST00000188334 292 ntBASIC7.72□□□□□ -1.17
Col4a6B1AVK5 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC7.72□□□□□ -1.17
Col4a6B1AVK5 Gm19047-201ENSMUST00000220922 1099 ntBASIC7.72□□□□□ -1.17
Col4a6B1AVK5 Gm46424-201ENSMUST00000221567 168 ntBASIC7.72□□□□□ -1.17
Col4a6B1AVK5 Nqo2-204ENSMUST00000222740 995 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col4a6B1AVK5 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col4a6B1AVK5 n-R5s217-201ENSMUST00000083341 116 ntBASIC7.72□□□□□ -1.17
Col4a6B1AVK5 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Col4a6B1AVK5 Upf3b-201ENSMUST00000076265 2344 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col4a6B1AVK5 Gm43609-201ENSMUST00000199084 2712 ntBASIC7.72□□□□□ -1.17
Col4a6B1AVK5 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Col4a6B1AVK5 Myo18a-209ENSMUST00000108376 7374 ntTSL 5 BASIC7.72□□□□□ -1.17
Col4a6B1AVK5 AC166574.5-201ENSMUST00000227438 1432 ntBASIC7.72□□□□□ -1.17
Col4a6B1AVK5 Zfp317-201ENSMUST00000079042 1824 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
Col4a6B1AVK5 Brip1os-201ENSMUST00000128960 4423 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms