Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Top1mtQ8R4U6 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Top1mtQ8R4U6 Prkg1-201ENSMUST00000065067 3914 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Top1mtQ8R4U6 4931406P16Rik-210ENSMUST00000206399 4158 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Top1mtQ8R4U6 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Top1mtQ8R4U6 Slc26a9-201ENSMUST00000049027 4739 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Top1mtQ8R4U6 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC9.02□□□□□ -0.97
Top1mtQ8R4U6 Gm7842-201ENSMUST00000217691 1379 ntBASIC9.02□□□□□ -0.97
Top1mtQ8R4U6 Rian-209ENSMUST00000182406 3476 ntBASIC9.02□□□□□ -0.97
Top1mtQ8R4U6 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Top1mtQ8R4U6 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Top1mtQ8R4U6 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Top1mtQ8R4U6 Gm13403-201ENSMUST00000127936 3651 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Top1mtQ8R4U6 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Top1mtQ8R4U6 Gm24462-201ENSMUST00000102430 106 ntBASIC9.02□□□□□ -0.97
Top1mtQ8R4U6 Trbv14-201ENSMUST00000103272 368 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Top1mtQ8R4U6 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Top1mtQ8R4U6 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Top1mtQ8R4U6 BC002163-201ENSMUST00000121906 319 ntBASIC9.02□□□□□ -0.97
Top1mtQ8R4U6 Gm23007-201ENSMUST00000158951 177 ntBASIC9.02□□□□□ -0.97
Top1mtQ8R4U6 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Top1mtQ8R4U6 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC9.02□□□□□ -0.97
Top1mtQ8R4U6 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Top1mtQ8R4U6 Mir6403-201ENSMUST00000185007 129 ntBASIC9.02□□□□□ -0.97
Top1mtQ8R4U6 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Top1mtQ8R4U6 1600027J07Rik-201ENSMUST00000209501 489 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Top1mtQ8R4U6 Rtp4-203ENSMUST00000210901 1158 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Top1mtQ8R4U6 Gm4972-201ENSMUST00000211108 1254 ntBASIC9.02□□□□□ -0.97
Top1mtQ8R4U6 Thyn1-203ENSMUST00000213770 775 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Top1mtQ8R4U6 AC160112.1-201ENSMUST00000219139 714 ntBASIC9.02□□□□□ -0.97
Top1mtQ8R4U6 AC102689.1-201ENSMUST00000220511 1090 ntBASIC9.02□□□□□ -0.97
Top1mtQ8R4U6 CT009546.3-201ENSMUST00000220914 208 ntBASIC9.02□□□□□ -0.97
Top1mtQ8R4U6 AC126939.4-201ENSMUST00000225360 743 ntBASIC9.02□□□□□ -0.97
Top1mtQ8R4U6 Mgat4d-201ENSMUST00000038692 1293 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Top1mtQ8R4U6 Oosp1-201ENSMUST00000048214 972 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Top1mtQ8R4U6 Olfr1032-201ENSMUST00000062166 933 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Top1mtQ8R4U6 Olfr1113-201ENSMUST00000079966 981 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Top1mtQ8R4U6 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Top1mtQ8R4U6 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Top1mtQ8R4U6 Gm42679-201ENSMUST00000197086 2906 ntBASIC9.02□□□□□ -0.97
Top1mtQ8R4U6 Rassf6-201ENSMUST00000031317 1958 ntAPPRIS P3 TSL 5 BASIC9.02□□□□□ -0.97
Top1mtQ8R4U6 Zfp473-202ENSMUST00000118162 3091 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Top1mtQ8R4U6 Ggta1-205ENSMUST00000113002 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Top1mtQ8R4U6 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Top1mtQ8R4U6 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC9.02□□□□□ -0.97
Top1mtQ8R4U6 Rnase4-202ENSMUST00000169895 1460 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Top1mtQ8R4U6 4833407H14Rik-201ENSMUST00000180442 1485 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Top1mtQ8R4U6 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Top1mtQ8R4U6 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Top1mtQ8R4U6 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Top1mtQ8R4U6 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC9.01□□□□□ -0.97
Top1mtQ8R4U6 Gm43533-201ENSMUST00000202933 2936 ntBASIC9.01□□□□□ -0.97
Top1mtQ8R4U6 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC9.01□□□□□ -0.97
Top1mtQ8R4U6 Gm44014-201ENSMUST00000205150 1509 ntBASIC9.01□□□□□ -0.97
Top1mtQ8R4U6 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC9.01□□□□□ -0.97
Top1mtQ8R4U6 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Top1mtQ8R4U6 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Top1mtQ8R4U6 Emsy-201ENSMUST00000038359 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Top1mtQ8R4U6 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Top1mtQ8R4U6 Zfp882-201ENSMUST00000110002 3152 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Top1mtQ8R4U6 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Top1mtQ8R4U6 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Top1mtQ8R4U6 Vmn1r-ps103-201ENSMUST00000120171 893 ntBASIC9.01□□□□□ -0.97
Top1mtQ8R4U6 Gm14329-201ENSMUST00000136027 591 ntTSL 3 BASIC9.01□□□□□ -0.97
Top1mtQ8R4U6 Gm15133-201ENSMUST00000139019 843 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Top1mtQ8R4U6 Gm15124-201ENSMUST00000142053 953 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Top1mtQ8R4U6 Gm26407-201ENSMUST00000158504 307 ntBASIC9.01□□□□□ -0.97
Top1mtQ8R4U6 Gm25164-201ENSMUST00000158908 116 ntBASIC9.01□□□□□ -0.97
Top1mtQ8R4U6 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC9.01□□□□□ -0.97
Top1mtQ8R4U6 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC9.01□□□□□ -0.97
Top1mtQ8R4U6 Gm43694-201ENSMUST00000200773 1119 ntBASIC9.01□□□□□ -0.97
Top1mtQ8R4U6 Gm42887-201ENSMUST00000202469 1119 ntBASIC9.01□□□□□ -0.97
Top1mtQ8R4U6 Gm7151-201ENSMUST00000211511 954 ntBASIC9.01□□□□□ -0.97
Top1mtQ8R4U6 Vmn1r42-201ENSMUST00000089419 1098 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Top1mtQ8R4U6 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Top1mtQ8R4U6 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Top1mtQ8R4U6 Slfn5-201ENSMUST00000067443 5979 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Top1mtQ8R4U6 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Top1mtQ8R4U6 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Top1mtQ8R4U6 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Top1mtQ8R4U6 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Top1mtQ8R4U6 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Top1mtQ8R4U6 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC9□□□□□ -0.97
Top1mtQ8R4U6 Gm37520-201ENSMUST00000194883 2672 ntBASIC9□□□□□ -0.97
Top1mtQ8R4U6 Pm20d1-202ENSMUST00000112393 6900 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Top1mtQ8R4U6 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Top1mtQ8R4U6 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC9□□□□□ -0.97
Top1mtQ8R4U6 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Top1mtQ8R4U6 Gm44777-201ENSMUST00000205941 4052 ntBASIC9□□□□□ -0.97
Top1mtQ8R4U6 Muc6-203ENSMUST00000190907 8757 ntAPPRIS P5 TSL 5 BASIC9□□□□□ -0.97
Top1mtQ8R4U6 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Top1mtQ8R4U6 Mre11a-202ENSMUST00000115632 5660 ntTSL 1 (best) BASIC9□□□□□ -0.97
Top1mtQ8R4U6 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Top1mtQ8R4U6 Olfr1019-201ENSMUST00000102634 933 ntAPPRIS P1 BASIC9□□□□□ -0.97
Top1mtQ8R4U6 Mir763-201ENSMUST00000103249 120 ntBASIC9□□□□□ -0.97
Top1mtQ8R4U6 Gm23529-201ENSMUST00000104562 132 ntBASIC9□□□□□ -0.97
Top1mtQ8R4U6 Mir669e-201ENSMUST00000117003 119 ntBASIC9□□□□□ -0.97
Top1mtQ8R4U6 Gm13521-201ENSMUST00000118922 866 ntBASIC9□□□□□ -0.97
Top1mtQ8R4U6 Gm12632-201ENSMUST00000121223 495 ntBASIC9□□□□□ -0.97
Top1mtQ8R4U6 A530010F05Rik-201ENSMUST00000146845 1020 ntTSL 1 (best) BASIC9□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms