Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Mtfr1-202ENSMUST00000117529 1896 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 Gm16044-201ENSMUST00000118475 450 ntBASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 Gm8644-201ENSMUST00000118619 596 ntBASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 Gm13325-201ENSMUST00000118746 806 ntBASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 Gm15753-201ENSMUST00000119241 1062 ntBASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 Gm12955-201ENSMUST00000119689 957 ntBASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 Gm15989-201ENSMUST00000121895 498 ntBASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 4930599N23Rik-201ENSMUST00000146981 880 ntTSL 2 BASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 Gm26407-201ENSMUST00000158504 307 ntBASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 Vmn2r-ps52-201ENSMUST00000176211 612 ntBASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 Schip1-207ENSMUST00000182997 1557 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 Mir7058-201ENSMUST00000184637 75 ntBASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 Gm28126-201ENSMUST00000185286 356 ntTSL 5 BASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 Gm5835-201ENSMUST00000185806 1270 ntBASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 Gm29291-201ENSMUST00000186055 686 ntTSL 3 BASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 Gm20587-201ENSMUST00000186367 1186 ntBASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 Gm28421-201ENSMUST00000186378 356 ntTSL 5 BASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 Gm28212-201ENSMUST00000187114 356 ntTSL 5 BASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 Gm28355-201ENSMUST00000187443 356 ntTSL 5 BASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 Gm29568-201ENSMUST00000187884 356 ntTSL 5 BASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 Gm29080-201ENSMUST00000188565 356 ntTSL 5 BASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 Gm28944-201ENSMUST00000188946 356 ntTSL 5 BASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 Gm28908-201ENSMUST00000189002 356 ntTSL 5 BASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 Gm29078-201ENSMUST00000190611 356 ntTSL 5 BASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 Gm29416-202ENSMUST00000191328 1201 ntTSL 5 BASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 Gm34217-201ENSMUST00000193562 356 ntTSL 5 BASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 Gm43526-201ENSMUST00000196666 1565 ntBASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 Gm42745-201ENSMUST00000200904 193 ntTSL 3 BASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 1600020E01Rik-203ENSMUST00000204008 713 ntTSL 5 BASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 Ceacam1-208ENSMUST00000206676 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 Gm44643-201ENSMUST00000208542 674 ntTSL 3 BASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 Gm8489-201ENSMUST00000209876 1152 ntBASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 Chmp2a-204ENSMUST00000211344 606 ntTSL 5 BASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 Chmp2a-206ENSMUST00000211626 726 ntTSL 2 BASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 Olfr863-ps1-201ENSMUST00000213073 929 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 AC133948.1-201ENSMUST00000214867 599 ntTSL 3 BASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 Olfr212-202ENSMUST00000218028 2291 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 AC157212.1-201ENSMUST00000228398 1075 ntBASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 AC165155.1-201ENSMUST00000228932 445 ntBASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 Exoc1-202ENSMUST00000087133 3371 ntAPPRIS P4 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 Tdrkh-204ENSMUST00000196606 2586 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Ccdc87Q8CDL9 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc87Q8CDL9 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc87Q8CDL9 Patj-204ENSMUST00000107029 4342 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc87Q8CDL9 Gm43161-201ENSMUST00000197020 1688 ntBASIC8.15□□□□□ -1.1
Ccdc87Q8CDL9 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc87Q8CDL9 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC8.15□□□□□ -1.1
Ccdc87Q8CDL9 Tex52-202ENSMUST00000130785 1424 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc87Q8CDL9 AC125074.1-201ENSMUST00000227970 1331 ntBASIC8.15□□□□□ -1.1
Ccdc87Q8CDL9 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc87Q8CDL9 Ghrh-202ENSMUST00000109536 503 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc87Q8CDL9 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Ccdc87Q8CDL9 Gm12514-201ENSMUST00000142782 568 ntTSL 3 BASIC8.15□□□□□ -1.1
Ccdc87Q8CDL9 Gm22730-201ENSMUST00000158085 171 ntBASIC8.15□□□□□ -1.1
Ccdc87Q8CDL9 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC8.15□□□□□ -1.1
Ccdc87Q8CDL9 Gm18970-201ENSMUST00000186040 938 ntBASIC8.15□□□□□ -1.1
Ccdc87Q8CDL9 Gm29011-201ENSMUST00000191059 712 ntBASIC8.15□□□□□ -1.1
Ccdc87Q8CDL9 Gm7369-201ENSMUST00000192738 936 ntBASIC8.15□□□□□ -1.1
Ccdc87Q8CDL9 Gm17977-201ENSMUST00000198743 574 ntBASIC8.15□□□□□ -1.1
Ccdc87Q8CDL9 Gm42696-201ENSMUST00000199859 1142 ntBASIC8.15□□□□□ -1.1
Ccdc87Q8CDL9 Gm31579-201ENSMUST00000203306 966 ntBASIC8.15□□□□□ -1.1
Ccdc87Q8CDL9 Gm30692-201ENSMUST00000208709 801 ntTSL 5 BASIC8.15□□□□□ -1.1
Ccdc87Q8CDL9 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC8.15□□□□□ -1.1
Ccdc87Q8CDL9 AC154738.3-201ENSMUST00000227953 409 ntBASIC8.15□□□□□ -1.1
Ccdc87Q8CDL9 Apoa2-201ENSMUST00000005824 492 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc87Q8CDL9 Gm10029-201ENSMUST00000089635 330 ntBASIC8.15□□□□□ -1.1
Ccdc87Q8CDL9 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc87Q8CDL9 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC8.15□□□□□ -1.1
Ccdc87Q8CDL9 AC192333.5-201ENSMUST00000224620 2350 ntBASIC8.15□□□□□ -1.1
Ccdc87Q8CDL9 Gm12661-201ENSMUST00000118780 3335 ntBASIC8.15□□□□□ -1.1
Ccdc87Q8CDL9 Rbms2-202ENSMUST00000099139 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc87Q8CDL9 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Ccdc87Q8CDL9 Med12l-204ENSMUST00000164225 10264 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
Ccdc87Q8CDL9 Olfr398-202ENSMUST00000117510 5135 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.11
Ccdc87Q8CDL9 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC8.15□□□□□ -1.11
Ccdc87Q8CDL9 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Ccdc87Q8CDL9 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
Ccdc87Q8CDL9 Gm37783-201ENSMUST00000192025 1856 ntBASIC8.15□□□□□ -1.11
Ccdc87Q8CDL9 Gm37321-201ENSMUST00000195742 1872 ntBASIC8.15□□□□□ -1.11
Ccdc87Q8CDL9 Klrb1c-201ENSMUST00000167691 2623 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.11
Ccdc87Q8CDL9 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.11
Ccdc87Q8CDL9 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Ccdc87Q8CDL9 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 Cxcl5-201ENSMUST00000031318 1575 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 A630001G21Rik-201ENSMUST00000064788 1353 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 Gm42899-201ENSMUST00000197034 2667 ntBASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 Fcgr3-201ENSMUST00000164044 1347 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC8.14□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms