Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm12525-201ENSMUST00000125412 554 ntTSL 2 BASIC10.68□□□□□ -0.7
Usp47Q8BY87 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC10.68□□□□□ -0.7
Usp47Q8BY87 Gm23639-201ENSMUST00000175078 132 ntBASIC10.68□□□□□ -0.7
Usp47Q8BY87 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC10.68□□□□□ -0.7
Usp47Q8BY87 Gm27782-201ENSMUST00000185059 199 ntBASIC10.68□□□□□ -0.7
Usp47Q8BY87 Gm29008-201ENSMUST00000189387 298 ntBASIC10.68□□□□□ -0.7
Usp47Q8BY87 Pdc-204ENSMUST00000191228 1235 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Usp47Q8BY87 Gm44931-201ENSMUST00000206056 545 ntBASIC10.68□□□□□ -0.7
Usp47Q8BY87 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC10.68□□□□□ -0.7
Usp47Q8BY87 Gm4972-201ENSMUST00000211108 1254 ntBASIC10.68□□□□□ -0.7
Usp47Q8BY87 AC151904.2-201ENSMUST00000218683 1177 ntBASIC10.68□□□□□ -0.7
Usp47Q8BY87 AC158981.1-201ENSMUST00000226943 1205 ntBASIC10.68□□□□□ -0.7
Usp47Q8BY87 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Usp47Q8BY87 Serpina3h-201ENSMUST00000049922 1239 ntTSL 5 BASIC10.68□□□□□ -0.7
Usp47Q8BY87 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Usp47Q8BY87 Olfr1124-202ENSMUST00000215909 2422 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Usp47Q8BY87 Gm6350-201ENSMUST00000195099 1339 ntBASIC10.68□□□□□ -0.7
Usp47Q8BY87 Asph-209ENSMUST00000108335 2514 ntTSL 5 BASIC10.68□□□□□ -0.7
Usp47Q8BY87 Tcp10c-201ENSMUST00000097403 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Usp47Q8BY87 Tpx2-202ENSMUST00000109816 3483 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Usp47Q8BY87 Gm37499-201ENSMUST00000194683 3478 ntBASIC10.68□□□□□ -0.7
Usp47Q8BY87 Fam135b-201ENSMUST00000022953 4623 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Usp47Q8BY87 Zkscan1-203ENSMUST00000110962 4843 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Usp47Q8BY87 Lars2-201ENSMUST00000038863 3894 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Usp47Q8BY87 Rffl-203ENSMUST00000074515 4973 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Usp47Q8BY87 Gm9866-206ENSMUST00000222838 1580 ntTSL 5 BASIC10.67□□□□□ -0.7
Usp47Q8BY87 Gm25546-201ENSMUST00000103977 132 ntBASIC10.67□□□□□ -0.7
Usp47Q8BY87 Gm13463-201ENSMUST00000119020 233 ntBASIC10.67□□□□□ -0.7
Usp47Q8BY87 Mir1932-201ENSMUST00000157390 90 ntBASIC10.67□□□□□ -0.7
Usp47Q8BY87 Gm28983-201ENSMUST00000186685 614 ntBASIC10.67□□□□□ -0.7
Usp47Q8BY87 Gm28150-201ENSMUST00000187305 614 ntBASIC10.67□□□□□ -0.7
Usp47Q8BY87 Gm28377-201ENSMUST00000189695 720 ntBASIC10.67□□□□□ -0.7
Usp47Q8BY87 Gm29496-201ENSMUST00000189854 693 ntBASIC10.67□□□□□ -0.7
Usp47Q8BY87 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC10.67□□□□□ -0.7
Usp47Q8BY87 Gm44760-201ENSMUST00000206375 1173 ntBASIC10.67□□□□□ -0.7
Usp47Q8BY87 Gm18559-201ENSMUST00000208249 604 ntBASIC10.67□□□□□ -0.7
Usp47Q8BY87 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Usp47Q8BY87 AC116502.1-201ENSMUST00000220989 291 ntBASIC10.67□□□□□ -0.7
Usp47Q8BY87 AC154692.1-202ENSMUST00000226632 1231 ntBASIC10.67□□□□□ -0.7
Usp47Q8BY87 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Usp47Q8BY87 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Usp47Q8BY87 9330136K24Rik-201ENSMUST00000180842 2478 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Usp47Q8BY87 Lepr-201ENSMUST00000037552 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Usp47Q8BY87 Gcc2-201ENSMUST00000057659 6547 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Usp47Q8BY87 Ehbp1-207ENSMUST00000180360 4971 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Usp47Q8BY87 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Usp47Q8BY87 Xlr5a-203ENSMUST00000114521 1474 ntTSL 5 BASIC10.67□□□□□ -0.7
Usp47Q8BY87 Chm-201ENSMUST00000026607 4868 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Usp47Q8BY87 Synpo2-207ENSMUST00000198584 9203 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Usp47Q8BY87 Rdh16-201ENSMUST00000071646 3207 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Usp47Q8BY87 Grm8-203ENSMUST00000115324 3299 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Usp47Q8BY87 Farsb-201ENSMUST00000068333 1951 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Usp47Q8BY87 Gm43686-201ENSMUST00000197351 2439 ntBASIC10.67□□□□□ -0.7
Usp47Q8BY87 Ank3-247ENSMUST00000218680 5500 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Usp47Q8BY87 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Usp47Q8BY87 Pcdh12-201ENSMUST00000025311 3859 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Usp47Q8BY87 Vmn1r199-202ENSMUST00000227685 5713 ntAPPRIS P2 BASIC10.67□□□□□ -0.7
Usp47Q8BY87 Il1rl1-202ENSMUST00000097772 5302 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Usp47Q8BY87 Gm18305-201ENSMUST00000216532 2128 ntBASIC10.67□□□□□ -0.7
Usp47Q8BY87 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Usp47Q8BY87 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Usp47Q8BY87 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Usp47Q8BY87 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC10.66□□□□□ -0.7
Usp47Q8BY87 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Usp47Q8BY87 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Usp47Q8BY87 Gm7571-201ENSMUST00000120252 927 ntBASIC10.66□□□□□ -0.7
Usp47Q8BY87 Gm6489-201ENSMUST00000178167 696 ntBASIC10.66□□□□□ -0.7
Usp47Q8BY87 Gm8004-201ENSMUST00000187782 617 ntBASIC10.66□□□□□ -0.7
Usp47Q8BY87 Gm17965-201ENSMUST00000193904 517 ntBASIC10.66□□□□□ -0.7
Usp47Q8BY87 Gm7285-201ENSMUST00000198801 580 ntBASIC10.66□□□□□ -0.7
Usp47Q8BY87 Gm44892-201ENSMUST00000208595 488 ntBASIC10.66□□□□□ -0.7
Usp47Q8BY87 Gm45478-201ENSMUST00000209472 211 ntBASIC10.66□□□□□ -0.7
Usp47Q8BY87 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC10.66□□□□□ -0.7
Usp47Q8BY87 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC10.66□□□□□ -0.7
Usp47Q8BY87 AC132590.1-201ENSMUST00000224374 1164 ntBASIC10.66□□□□□ -0.7
Usp47Q8BY87 Mtm1-205ENSMUST00000114617 3338 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Usp47Q8BY87 Mtm1-202ENSMUST00000033700 3316 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Usp47Q8BY87 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Usp47Q8BY87 Klhl32-203ENSMUST00000108214 5970 ntTSL 5 BASIC10.66□□□□□ -0.7
Usp47Q8BY87 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Usp47Q8BY87 Gm19028-201ENSMUST00000189614 1873 ntBASIC10.66□□□□□ -0.7
Usp47Q8BY87 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Usp47Q8BY87 A430110L20Rik-202ENSMUST00000181680 2513 ntBASIC10.66□□□□□ -0.7
Usp47Q8BY87 Ubn2-205ENSMUST00000160583 14644 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Usp47Q8BY87 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Usp47Q8BY87 Ctnnd1-216ENSMUST00000111690 5945 ntTSL 5 BASIC10.66□□□□□ -0.7
Usp47Q8BY87 Olfr766-ps1-201ENSMUST00000204515 2909 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Usp47Q8BY87 Gcm2-201ENSMUST00000021791 3073 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Usp47Q8BY87 Rab11b-201ENSMUST00000057373 6109 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Usp47Q8BY87 Nkrf-201ENSMUST00000057093 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Usp47Q8BY87 Ighd-202ENSMUST00000194162 1806 ntAPPRIS P5 BASIC10.66□□□□□ -0.7
Usp47Q8BY87 Itpr1-201ENSMUST00000032192 9870 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Usp47Q8BY87 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC10.66□□□□□ -0.7
Usp47Q8BY87 Zfp641-202ENSMUST00000169721 3673 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Usp47Q8BY87 Tceal7-201ENSMUST00000113116 971 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Usp47Q8BY87 Nrp2-206ENSMUST00000114157 6357 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Usp47Q8BY87 Gm13877-201ENSMUST00000120614 417 ntBASIC10.65□□□□□ -0.7
Usp47Q8BY87 Gm16057-201ENSMUST00000120811 759 ntBASIC10.65□□□□□ -0.7
Usp47Q8BY87 Gm15362-201ENSMUST00000121459 388 ntBASIC10.65□□□□□ -0.7
Usp47Q8BY87 Gm22604-201ENSMUST00000157604 311 ntBASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms