Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Bbx-208ENSMUST00000138166 8743 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
Rif1Q6PR54 Scrn3-201ENSMUST00000090811 3309 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Rif1Q6PR54 Ablim1-207ENSMUST00000111529 5927 ntTSL 5 BASIC6.57□□□□□ -1.36
Rif1Q6PR54 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Rif1Q6PR54 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Rif1Q6PR54 Mir669e-201ENSMUST00000117003 119 ntBASIC6.57□□□□□ -1.36
Rif1Q6PR54 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC6.57□□□□□ -1.36
Rif1Q6PR54 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC6.57□□□□□ -1.36
Rif1Q6PR54 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC6.57□□□□□ -1.36
Rif1Q6PR54 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Rif1Q6PR54 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Rif1Q6PR54 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Rif1Q6PR54 4930448K20Rik-202ENSMUST00000182072 1433 ntBASIC6.57□□□□□ -1.36
Rif1Q6PR54 Gm29555-201ENSMUST00000188620 1497 ntTSL 5 BASIC6.57□□□□□ -1.36
Rif1Q6PR54 Tnip3-208ENSMUST00000212402 1577 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Rif1Q6PR54 Casp8-203ENSMUST00000190213 1628 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Rif1Q6PR54 D830005E20Rik-201ENSMUST00000217716 1844 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Rif1Q6PR54 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Rif1Q6PR54 Mybbp1a-201ENSMUST00000045633 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Rif1Q6PR54 Sec23ip-201ENSMUST00000042942 4505 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Rif1Q6PR54 Zic4-201ENSMUST00000066384 3891 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Rif1Q6PR54 Cse1l-201ENSMUST00000002790 3641 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Rif1Q6PR54 Mroh4-202ENSMUST00000137963 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Rif1Q6PR54 Zfp54-202ENSMUST00000165230 2832 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Rif1Q6PR54 Nrep-201ENSMUST00000051087 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Rif1Q6PR54 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Rif1Q6PR54 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC6.57□□□□□ -1.36
Rif1Q6PR54 Mup-ps16-201ENSMUST00000120085 596 ntBASIC6.57□□□□□ -1.36
Rif1Q6PR54 Gm22312-201ENSMUST00000158005 130 ntBASIC6.57□□□□□ -1.36
Rif1Q6PR54 Vmn2r-ps60-201ENSMUST00000173296 897 ntBASIC6.57□□□□□ -1.36
Rif1Q6PR54 Gm43945-201ENSMUST00000203595 754 ntBASIC6.57□□□□□ -1.36
Rif1Q6PR54 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Rif1Q6PR54 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Rif1Q6PR54 Gm5528-201ENSMUST00000076314 480 ntBASIC6.57□□□□□ -1.36
Rif1Q6PR54 Gm26163-201ENSMUST00000083792 178 ntBASIC6.57□□□□□ -1.36
Rif1Q6PR54 Depdc5-205ENSMUST00000120902 5195 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Rif1Q6PR54 Slc7a14-202ENSMUST00000108245 3080 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Rif1Q6PR54 2610037D02Rik-202ENSMUST00000185067 2997 ntBASIC6.57□□□□□ -1.36
Rif1Q6PR54 Olfr1199-204ENSMUST00000213138 2657 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Rif1Q6PR54 Dock4-204ENSMUST00000220912 7360 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Rif1Q6PR54 Mirg-212ENSMUST00000183144 3797 ntTSL 5 BASIC6.57□□□□□ -1.36
Rif1Q6PR54 Tardbp-202ENSMUST00000084125 7477 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rif1Q6PR54 Myt1-203ENSMUST00000108757 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rif1Q6PR54 Zfp248-201ENSMUST00000069292 3683 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rif1Q6PR54 Cnksr3-202ENSMUST00000150282 2554 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Rif1Q6PR54 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rif1Q6PR54 Calhm2-202ENSMUST00000140512 3377 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Rif1Q6PR54 Mical2-201ENSMUST00000037991 3352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rif1Q6PR54 Gm16427-201ENSMUST00000179091 1449 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Rif1Q6PR54 Eif2d-201ENSMUST00000068791 3316 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Rif1Q6PR54 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Rif1Q6PR54 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Rif1Q6PR54 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC6.56□□□□□ -1.36
Rif1Q6PR54 Gm5644-201ENSMUST00000122039 465 ntBASIC6.56□□□□□ -1.36
Rif1Q6PR54 Gm16357-201ENSMUST00000144091 474 ntBASIC6.56□□□□□ -1.36
Rif1Q6PR54 Fbxl12-210ENSMUST00000155301 476 ntTSL 3 BASIC6.56□□□□□ -1.36
Rif1Q6PR54 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
Rif1Q6PR54 Gm5871-201ENSMUST00000176461 718 ntBASIC6.56□□□□□ -1.36
Rif1Q6PR54 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC6.56□□□□□ -1.36
Rif1Q6PR54 Mir3107-201ENSMUST00000199351 90 ntBASIC6.56□□□□□ -1.36
Rif1Q6PR54 Gm18765-201ENSMUST00000203166 660 ntBASIC6.56□□□□□ -1.36
Rif1Q6PR54 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Rif1Q6PR54 Gm19161-201ENSMUST00000217958 737 ntBASIC6.56□□□□□ -1.36
Rif1Q6PR54 Gm9269-201ENSMUST00000221661 578 ntBASIC6.56□□□□□ -1.36
Rif1Q6PR54 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC6.56□□□□□ -1.36
Rif1Q6PR54 CT025579.4-201ENSMUST00000224598 627 ntBASIC6.56□□□□□ -1.36
Rif1Q6PR54 AC124395.1-201ENSMUST00000225940 707 ntBASIC6.56□□□□□ -1.36
Rif1Q6PR54 Pfdn5-202ENSMUST00000062492 464 ntTSL 3 BASIC6.56□□□□□ -1.36
Rif1Q6PR54 Oprl1-201ENSMUST00000071585 2999 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rif1Q6PR54 Olfr1113-201ENSMUST00000079966 981 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Rif1Q6PR54 Gm24613-201ENSMUST00000083266 130 ntBASIC6.56□□□□□ -1.36
Rif1Q6PR54 Mir27a-201ENSMUST00000083510 87 ntBASIC6.56□□□□□ -1.36
Rif1Q6PR54 Phc3-210ENSMUST00000177992 2920 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Rif1Q6PR54 Tchhl1-201ENSMUST00000029516 2066 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rif1Q6PR54 Gm37139-201ENSMUST00000192134 4419 ntBASIC6.56□□□□□ -1.36
Rif1Q6PR54 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Rif1Q6PR54 Pkd1l3-201ENSMUST00000057344 6456 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rif1Q6PR54 Mss51-201ENSMUST00000022353 1826 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rif1Q6PR54 Clca2-201ENSMUST00000040465 3986 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rif1Q6PR54 Rpap2-203ENSMUST00000112651 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rif1Q6PR54 Ceacam20-201ENSMUST00000094753 2888 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rif1Q6PR54 Pinc-201ENSMUST00000190229 2170 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Rif1Q6PR54 Acad11-207ENSMUST00000189998 2030 ntTSL 5 BASIC6.56□□□□□ -1.36
Rif1Q6PR54 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Rif1Q6PR54 P2ry14-206ENSMUST00000197841 2476 ntTSL 5 BASIC6.56□□□□□ -1.36
Rif1Q6PR54 A930005G22Rik-201ENSMUST00000201293 1904 ntBASIC6.56□□□□□ -1.36
Rif1Q6PR54 Zmynd8-206ENSMUST00000109269 6188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rif1Q6PR54 Nup214-201ENSMUST00000065398 6605 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rif1Q6PR54 Slc28a2-202ENSMUST00000110524 2836 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rif1Q6PR54 Cfap58-201ENSMUST00000066308 3345 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rif1Q6PR54 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rif1Q6PR54 Gm14328-201ENSMUST00000122178 408 ntBASIC6.56□□□□□ -1.36
Rif1Q6PR54 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC6.56□□□□□ -1.36
Rif1Q6PR54 Gm24530-201ENSMUST00000157948 288 ntBASIC6.56□□□□□ -1.36
Rif1Q6PR54 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC6.56□□□□□ -1.36
Rif1Q6PR54 Gm28801-201ENSMUST00000188761 449 ntBASIC6.56□□□□□ -1.36
Rif1Q6PR54 Gm42752-201ENSMUST00000198394 1106 ntBASIC6.56□□□□□ -1.36
Rif1Q6PR54 Gm18009-201ENSMUST00000203239 1016 ntBASIC6.56□□□□□ -1.36
Rif1Q6PR54 Gm45032-201ENSMUST00000205375 520 ntBASIC6.56□□□□□ -1.36
Rif1Q6PR54 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC6.56□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms