Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Lnpk-202ENSMUST00000102676 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
CtifQ6PEE2 Olfr859-203ENSMUST00000217280 9596 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
CtifQ6PEE2 Gm37914-201ENSMUST00000195317 2679 ntBASIC8.11□□□□□ -1.11
CtifQ6PEE2 AC131667.1-201ENSMUST00000214665 2175 ntBASIC8.11□□□□□ -1.11
CtifQ6PEE2 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
CtifQ6PEE2 Cep162-201ENSMUST00000093802 7685 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CtifQ6PEE2 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC8.11□□□□□ -1.11
CtifQ6PEE2 Cphx3-201ENSMUST00000163305 1653 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CtifQ6PEE2 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
CtifQ6PEE2 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
CtifQ6PEE2 Gm37258-201ENSMUST00000191734 1627 ntBASIC8.11□□□□□ -1.11
CtifQ6PEE2 Sptan1-202ENSMUST00000095083 7883 ntTSL 5 BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Gm26831-201ENSMUST00000181458 1380 ntBASIC8.1□□□□□ -1.11
CtifQ6PEE2 Depdc5-204ENSMUST00000119705 7929 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Gm37423-201ENSMUST00000194246 3342 ntBASIC8.1□□□□□ -1.11
CtifQ6PEE2 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Fcgr3-201ENSMUST00000164044 1347 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Tcf24-201ENSMUST00000097824 2639 ntBASIC8.1□□□□□ -1.11
CtifQ6PEE2 Gm28485-201ENSMUST00000185300 1500 ntTSL 5 BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Gm28684-201ENSMUST00000185586 1500 ntTSL 5 BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Gm28422-201ENSMUST00000186112 1500 ntTSL 5 BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Gm29447-201ENSMUST00000186407 1500 ntTSL 5 BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Gm29628-201ENSMUST00000187206 1500 ntTSL 5 BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Gm28316-201ENSMUST00000187576 1500 ntTSL 5 BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Gm29313-201ENSMUST00000187866 1500 ntTSL 5 BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Gm28252-201ENSMUST00000188457 1500 ntTSL 5 BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Gm28950-203ENSMUST00000188826 1500 ntTSL 5 BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Gm29303-201ENSMUST00000189215 1500 ntTSL 5 BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Gm28220-201ENSMUST00000189607 1500 ntTSL 5 BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Gm29342-202ENSMUST00000189689 1500 ntTSL 5 BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Gm29116-202ENSMUST00000189963 1500 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Gm29081-203ENSMUST00000190140 1500 ntTSL 5 BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Gm28726-201ENSMUST00000190994 1500 ntTSL 5 BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Gm29386-203ENSMUST00000191185 1500 ntTSL 5 BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Gm33954-202ENSMUST00000195188 1500 ntTSL 5 BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Gm24541-201ENSMUST00000103871 96 ntBASIC8.1□□□□□ -1.11
CtifQ6PEE2 Cdk2ap1-203ENSMUST00000111473 715 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Zfx-202ENSMUST00000113925 879 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Gm14450-201ENSMUST00000119984 240 ntBASIC8.1□□□□□ -1.11
CtifQ6PEE2 Snhg12-201ENSMUST00000126380 890 ntTSL 2 BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Gm8813-201ENSMUST00000155930 595 ntBASIC8.1□□□□□ -1.11
CtifQ6PEE2 Mir1964-201ENSMUST00000158514 83 ntBASIC8.1□□□□□ -1.11
CtifQ6PEE2 Gm16556-201ENSMUST00000162608 471 ntTSL 5 BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Ifrd1-204ENSMUST00000165027 1293 ntTSL 5 BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Vmn2r-ps31-201ENSMUST00000176474 760 ntBASIC8.1□□□□□ -1.11
CtifQ6PEE2 Tcstv3-201ENSMUST00000178349 510 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Mir6403-201ENSMUST00000185007 129 ntBASIC8.1□□□□□ -1.11
CtifQ6PEE2 Gm3745-201ENSMUST00000193773 421 ntBASIC8.1□□□□□ -1.11
CtifQ6PEE2 Mark4-ps-201ENSMUST00000196140 384 ntBASIC8.1□□□□□ -1.11
CtifQ6PEE2 4930553I04Rik-201ENSMUST00000196722 670 ntBASIC8.1□□□□□ -1.11
CtifQ6PEE2 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC8.1□□□□□ -1.11
CtifQ6PEE2 Gm19810-201ENSMUST00000218521 251 ntBASIC8.1□□□□□ -1.11
CtifQ6PEE2 Gm18972-201ENSMUST00000218873 630 ntBASIC8.1□□□□□ -1.11
CtifQ6PEE2 Gm21941-201ENSMUST00000221121 562 ntBASIC8.1□□□□□ -1.11
CtifQ6PEE2 Serpina3h-201ENSMUST00000049922 1239 ntTSL 5 BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Olfr412-201ENSMUST00000077794 939 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Mir187-201ENSMUST00000083598 61 ntBASIC8.1□□□□□ -1.11
CtifQ6PEE2 Gm16026-201ENSMUST00000094774 580 ntBASIC8.1□□□□□ -1.11
CtifQ6PEE2 Gm37168-201ENSMUST00000192965 1452 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Kcnd2-201ENSMUST00000081542 5152 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Col25a1-202ENSMUST00000106353 6701 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Smpd4-201ENSMUST00000006053 4623 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Kcnj15-208ENSMUST00000113862 5705 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
CtifQ6PEE2 Cav1-202ENSMUST00000115453 2746 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CtifQ6PEE2 Atl3-201ENSMUST00000025668 6376 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
CtifQ6PEE2 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC8.09□□□□□ -1.11
CtifQ6PEE2 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC8.09□□□□□ -1.11
CtifQ6PEE2 Clnk-201ENSMUST00000169819 1700 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
CtifQ6PEE2 Clnk-202ENSMUST00000171633 1700 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
CtifQ6PEE2 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CtifQ6PEE2 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
CtifQ6PEE2 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CtifQ6PEE2 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
CtifQ6PEE2 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CtifQ6PEE2 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CtifQ6PEE2 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CtifQ6PEE2 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CtifQ6PEE2 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CtifQ6PEE2 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC8.09□□□□□ -1.11
CtifQ6PEE2 Arhgef9-205ENSMUST00000113883 5399 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
CtifQ6PEE2 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CtifQ6PEE2 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
CtifQ6PEE2 Myl7-201ENSMUST00000102921 590 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CtifQ6PEE2 Gm23127-201ENSMUST00000104261 130 ntBASIC8.09□□□□□ -1.11
CtifQ6PEE2 Gm8818-201ENSMUST00000110797 1047 ntBASIC8.09□□□□□ -1.11
CtifQ6PEE2 Gm12460-201ENSMUST00000117147 357 ntBASIC8.09□□□□□ -1.11
CtifQ6PEE2 Gm11922-201ENSMUST00000118967 475 ntBASIC8.09□□□□□ -1.11
CtifQ6PEE2 Gm4911-201ENSMUST00000119388 945 ntBASIC8.09□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms