Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 2410089E03Rik-201ENSMUST00000110617 10469 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Scaf8Q6DID3 Gm37067-201ENSMUST00000195730 1628 ntBASIC10.06□□□□□ -0.8
Scaf8Q6DID3 Serpina3k-201ENSMUST00000043058 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Scaf8Q6DID3 Gm38910-201ENSMUST00000204630 2448 ntBASIC10.06□□□□□ -0.8
Scaf8Q6DID3 Palmd-201ENSMUST00000040097 2433 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Scaf8Q6DID3 AC133598.5-201ENSMUST00000224937 1517 ntBASIC10.06□□□□□ -0.8
Scaf8Q6DID3 Myo7b-201ENSMUST00000134663 6621 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Scaf8Q6DID3 Timeless-203ENSMUST00000105242 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Scaf8Q6DID3 Rhobtb1-201ENSMUST00000020101 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Scaf8Q6DID3 Trim66-201ENSMUST00000033339 4354 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Scaf8Q6DID3 Gm43410-201ENSMUST00000197510 2234 ntBASIC10.06□□□□□ -0.8
Scaf8Q6DID3 Klrb1b-201ENSMUST00000032472 2228 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Scaf8Q6DID3 Dnm3-203ENSMUST00000159763 1305 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Scaf8Q6DID3 Gm43062-201ENSMUST00000196302 1319 ntBASIC10.06□□□□□ -0.8
Scaf8Q6DID3 Cdh5-201ENSMUST00000034339 3995 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Scaf8Q6DID3 Col4a5-202ENSMUST00000112931 6536 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Scaf8Q6DID3 Gm38374-201ENSMUST00000194417 2033 ntBASIC10.06□□□□□ -0.8
Scaf8Q6DID3 AC165148.1-201ENSMUST00000224795 2372 ntBASIC10.06□□□□□ -0.8
Scaf8Q6DID3 Pakap-203ENSMUST00000150412 5163 ntAPPRIS P5 TSL 5 BASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Thsd7b-202ENSMUST00000073527 6213 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Gm6733-201ENSMUST00000118302 1920 ntBASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Gm43413-201ENSMUST00000200411 1566 ntBASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Rnf19a-201ENSMUST00000022890 4277 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Pear1-202ENSMUST00000079083 4297 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Pcdh15-241ENSMUST00000195531 5241 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Lrrc9-203ENSMUST00000161284 3817 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Dlgap2-208ENSMUST00000150247 3138 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Slc11a2-205ENSMUST00000138843 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Gm38272-201ENSMUST00000194431 2400 ntBASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Snrpd3-201ENSMUST00000020397 3036 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Pax9-203ENSMUST00000153250 4232 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Sfi1-201ENSMUST00000066391 3898 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Nedd1-201ENSMUST00000020163 3534 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Gm9271-201ENSMUST00000185988 2580 ntBASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Gm15766-201ENSMUST00000118025 813 ntBASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Gm13196-201ENSMUST00000118297 379 ntBASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Gm12067-201ENSMUST00000119755 1148 ntBASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Gm11534-202ENSMUST00000129261 470 ntTSL 3 BASIC10.05□□□□□ -0.8
Scaf8Q6DID3 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Mir1962-201ENSMUST00000157516 121 ntBASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Gm22836-201ENSMUST00000158441 61 ntBASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Gm23633-201ENSMUST00000175293 119 ntBASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Gm24576-201ENSMUST00000175508 248 ntBASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Gm5300-201ENSMUST00000182201 1003 ntBASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Gm37392-201ENSMUST00000192098 516 ntBASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Gm9236-201ENSMUST00000196892 587 ntBASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Gm43227-201ENSMUST00000202239 677 ntBASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Gm6308-201ENSMUST00000203226 313 ntBASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Gm2767-201ENSMUST00000209582 473 ntBASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Gm8804-201ENSMUST00000212292 798 ntBASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Thy1-204ENSMUST00000214627 446 ntTSL 3 BASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Scaf8Q6DID3 AC192334.2-201ENSMUST00000223087 1091 ntBASIC10.05□□□□□ -0.8
Scaf8Q6DID3 AC157650.2-201ENSMUST00000224666 328 ntBASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Krtap8-1-201ENSMUST00000072280 579 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Sema3d-205ENSMUST00000197927 3207 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Adam22-204ENSMUST00000088761 9077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Ctage5-220ENSMUST00000177225 2872 ntTSL 5 BASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Mas1-206ENSMUST00000162333 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Gm8159-202ENSMUST00000170546 1759 ntAPPRIS P5 TSL 5 BASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Bhlhe40-201ENSMUST00000032194 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Rbms2-202ENSMUST00000099139 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Gm42460-201ENSMUST00000198863 2567 ntBASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Ect2l-205ENSMUST00000209178 2586 ntTSL 5 BASIC10.05□□□□□ -0.8
Scaf8Q6DID3 AC159196.3-201ENSMUST00000224307 1841 ntBASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Agxt2-201ENSMUST00000022858 1825 ntTSL 2 BASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Nipsnap3a-202ENSMUST00000107666 1553 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Gm43280-201ENSMUST00000202958 1550 ntBASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Mgat5-202ENSMUST00000171405 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Gm26809-201ENSMUST00000180863 2981 ntTSL 5 BASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Col6a1-201ENSMUST00000001147 4100 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Scaf8Q6DID3 Nr6a1-201ENSMUST00000076275 5941 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Scaf8Q6DID3 3632454L22Rik-202ENSMUST00000153610 2872 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Scaf8Q6DID3 Nbr1-205ENSMUST00000107212 4168 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Scaf8Q6DID3 Wnk1-224ENSMUST00000203030 8163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Scaf8Q6DID3 Washc2-201ENSMUST00000036759 4307 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Scaf8Q6DID3 D230017M19Rik-203ENSMUST00000181973 1649 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Scaf8Q6DID3 Gm43533-201ENSMUST00000202933 2936 ntBASIC10.04□□□□□ -0.8
Scaf8Q6DID3 Polr1b-202ENSMUST00000103205 3998 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Scaf8Q6DID3 Gm45205-201ENSMUST00000205745 3330 ntBASIC10.04□□□□□ -0.8
Scaf8Q6DID3 Gm14258-201ENSMUST00000144607 2031 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Scaf8Q6DID3 Ank1-215ENSMUST00000173248 7100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Scaf8Q6DID3 Rai14-202ENSMUST00000169385 4759 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Scaf8Q6DID3 Pik3r4-210ENSMUST00000191268 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Scaf8Q6DID3 Trpm1-201ENSMUST00000085222 5711 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Scaf8Q6DID3 Actr2-201ENSMUST00000000137 3631 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Scaf8Q6DID3 Kctd21-201ENSMUST00000054107 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Scaf8Q6DID3 Tango2-201ENSMUST00000115628 1507 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms