Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Gm42760-201ENSMUST00000199814 311 ntBASIC6.95□□□□□ -1.3
AtmQ62388 Gm31861-201ENSMUST00000204563 672 ntBASIC6.95□□□□□ -1.3
AtmQ62388 Gm9367-201ENSMUST00000205703 546 ntBASIC6.95□□□□□ -1.3
AtmQ62388 AC112956.1-201ENSMUST00000213563 492 ntBASIC6.95□□□□□ -1.3
AtmQ62388 AC163651.1-201ENSMUST00000222500 372 ntBASIC6.95□□□□□ -1.3
AtmQ62388 Gm9280-201ENSMUST00000223155 517 ntBASIC6.95□□□□□ -1.3
AtmQ62388 CT009733.1-202ENSMUST00000224941 441 ntBASIC6.95□□□□□ -1.3
AtmQ62388 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
AtmQ62388 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
AtmQ62388 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC6.95□□□□□ -1.3
AtmQ62388 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC6.95□□□□□ -1.3
AtmQ62388 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
AtmQ62388 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
AtmQ62388 Ammecr1l-201ENSMUST00000115808 4769 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
AtmQ62388 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
AtmQ62388 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
AtmQ62388 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
AtmQ62388 Hmgcs1-202ENSMUST00000224188 3464 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
AtmQ62388 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
AtmQ62388 Gm12608-201ENSMUST00000122013 1715 ntBASIC6.95□□□□□ -1.3
AtmQ62388 Gm29311-202ENSMUST00000189721 1532 ntTSL 5 BASIC6.95□□□□□ -1.3
AtmQ62388 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
AtmQ62388 Sorbs1-202ENSMUST00000099467 2817 ntAPPRIS P4 TSL 5 BASIC6.95□□□□□ -1.3
AtmQ62388 Fam217a-201ENSMUST00000021851 2402 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
AtmQ62388 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
AtmQ62388 Adam18-201ENSMUST00000033957 2361 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
AtmQ62388 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
AtmQ62388 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
AtmQ62388 Gm25246-201ENSMUST00000175476 69 ntBASIC6.95□□□□□ -1.3
AtmQ62388 Gm44422-201ENSMUST00000204142 1025 ntBASIC6.95□□□□□ -1.3
AtmQ62388 Pigr-201ENSMUST00000027675 3849 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
AtmQ62388 Gm24032-201ENSMUST00000083932 159 ntBASIC6.95□□□□□ -1.3
AtmQ62388 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC6.95□□□□□ -1.3
AtmQ62388 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
AtmQ62388 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
AtmQ62388 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
AtmQ62388 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
AtmQ62388 Ankrd27-206ENSMUST00000190503 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
AtmQ62388 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
AtmQ62388 Gm13754-201ENSMUST00000120486 998 ntBASIC6.95□□□□□ -1.3
AtmQ62388 Gm4907-202ENSMUST00000163718 1236 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
AtmQ62388 Gm37070-201ENSMUST00000193272 460 ntBASIC6.95□□□□□ -1.3
AtmQ62388 AC165349.1-201ENSMUST00000217896 424 ntBASIC6.95□□□□□ -1.3
AtmQ62388 AC069562.1-201ENSMUST00000224206 434 ntBASIC6.95□□□□□ -1.3
AtmQ62388 Gm26163-201ENSMUST00000083792 178 ntBASIC6.95□□□□□ -1.3
AtmQ62388 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
AtmQ62388 Patj-206ENSMUST00000107033 3624 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
AtmQ62388 Zfp14-202ENSMUST00000207072 2835 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
AtmQ62388 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
AtmQ62388 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
AtmQ62388 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
AtmQ62388 Prr5l-209ENSMUST00000163762 4159 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
AtmQ62388 Cnot2-204ENSMUST00000164088 2618 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
AtmQ62388 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
AtmQ62388 Sdr42e1-201ENSMUST00000037955 2867 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
AtmQ62388 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC6.94□□□□□ -1.3
AtmQ62388 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
AtmQ62388 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
AtmQ62388 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
AtmQ62388 Nsun6-204ENSMUST00000114715 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
AtmQ62388 Gm45354-201ENSMUST00000199820 2557 ntBASIC6.94□□□□□ -1.3
AtmQ62388 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
AtmQ62388 Gm16188-201ENSMUST00000142019 420 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
AtmQ62388 Snora47-201ENSMUST00000157483 138 ntBASIC6.94□□□□□ -1.3
AtmQ62388 Gm26410-201ENSMUST00000157670 261 ntBASIC6.94□□□□□ -1.3
AtmQ62388 Mir1929-201ENSMUST00000158635 93 ntBASIC6.94□□□□□ -1.3
AtmQ62388 Gm22917-201ENSMUST00000180116 110 ntBASIC6.94□□□□□ -1.3
AtmQ62388 Gm27960-201ENSMUST00000183445 184 ntBASIC6.94□□□□□ -1.3
AtmQ62388 Gm43568-202ENSMUST00000198427 476 ntTSL 3 BASIC6.94□□□□□ -1.3
AtmQ62388 Gm3321-201ENSMUST00000200603 1129 ntBASIC6.94□□□□□ -1.3
AtmQ62388 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
AtmQ62388 Gm45705-201ENSMUST00000211831 2134 ntBASIC6.94□□□□□ -1.3
AtmQ62388 Gm5612-201ENSMUST00000053326 375 ntBASIC6.94□□□□□ -1.3
AtmQ62388 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC6.94□□□□□ -1.3
AtmQ62388 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
AtmQ62388 Fnbp1-207ENSMUST00000113559 4378 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
AtmQ62388 Liph-201ENSMUST00000060673 3793 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
AtmQ62388 Plec-215ENSMUST00000169108 14853 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
AtmQ62388 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
AtmQ62388 Arhgef3-201ENSMUST00000049206 3585 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
AtmQ62388 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
AtmQ62388 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
AtmQ62388 Nat2-202ENSMUST00000163856 1463 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
AtmQ62388 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
AtmQ62388 Il5ra-201ENSMUST00000167925 1704 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
AtmQ62388 Itga10-202ENSMUST00000119365 5035 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
AtmQ62388 Itga10-201ENSMUST00000029744 5044 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
AtmQ62388 Psma8-201ENSMUST00000040860 1693 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
AtmQ62388 Filip1-201ENSMUST00000093811 4640 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
AtmQ62388 Gm25724-201ENSMUST00000104531 117 ntBASIC6.94□□□□□ -1.3
AtmQ62388 Gm15578-201ENSMUST00000117320 475 ntBASIC6.94□□□□□ -1.3
AtmQ62388 Dmrtc1a-203ENSMUST00000120808 1061 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
AtmQ62388 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
AtmQ62388 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
AtmQ62388 Gm27210-201ENSMUST00000184263 402 ntBASIC6.94□□□□□ -1.3
AtmQ62388 Gm20770-201ENSMUST00000193474 694 ntBASIC6.94□□□□□ -1.3
AtmQ62388 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
AtmQ62388 Rnase1-201ENSMUST00000080126 992 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
AtmQ62388 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
AtmQ62388 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 104.5 ms