Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC9.09□□□□□ -0.95
Vps54Q5SPW0 Gm15481-201ENSMUST00000120264 539 ntBASIC9.09□□□□□ -0.95
Vps54Q5SPW0 Gm14465-201ENSMUST00000120603 567 ntBASIC9.09□□□□□ -0.95
Vps54Q5SPW0 Sh3d2c-ps1-201ENSMUST00000121498 904 ntBASIC9.09□□□□□ -0.95
Vps54Q5SPW0 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Vps54Q5SPW0 Gm24782-201ENSMUST00000157641 132 ntBASIC9.09□□□□□ -0.95
Vps54Q5SPW0 Gm24011-201ENSMUST00000157732 268 ntBASIC9.09□□□□□ -0.95
Vps54Q5SPW0 Gm23027-201ENSMUST00000158771 158 ntBASIC9.09□□□□□ -0.95
Vps54Q5SPW0 Tecr-202ENSMUST00000163837 1272 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Vps54Q5SPW0 Gm24923-201ENSMUST00000178201 88 ntBASIC9.09□□□□□ -0.95
Vps54Q5SPW0 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC9.09□□□□□ -0.95
Vps54Q5SPW0 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC9.09□□□□□ -0.95
Vps54Q5SPW0 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC9.09□□□□□ -0.95
Vps54Q5SPW0 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Vps54Q5SPW0 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC9.09□□□□□ -0.95
Vps54Q5SPW0 Nqo2-204ENSMUST00000222740 995 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Vps54Q5SPW0 AC154461.4-201ENSMUST00000224878 468 ntBASIC9.09□□□□□ -0.95
Vps54Q5SPW0 AC163038.4-201ENSMUST00000224942 474 ntBASIC9.09□□□□□ -0.95
Vps54Q5SPW0 CT009515.1-201ENSMUST00000228127 586 ntBASIC9.09□□□□□ -0.95
Vps54Q5SPW0 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Vps54Q5SPW0 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC9.09□□□□□ -0.95
Vps54Q5SPW0 Ighd-202ENSMUST00000194162 1806 ntAPPRIS P5 BASIC9.09□□□□□ -0.95
Vps54Q5SPW0 Brca1-201ENSMUST00000017290 6572 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Vps54Q5SPW0 Gm29113-201ENSMUST00000185991 3432 ntBASIC9.09□□□□□ -0.95
Vps54Q5SPW0 Acad11-201ENSMUST00000047799 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Vps54Q5SPW0 Rad51b-203ENSMUST00000218039 2187 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Vps54Q5SPW0 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Vps54Q5SPW0 Gm42692-201ENSMUST00000199482 2833 ntBASIC9.09□□□□□ -0.96
Vps54Q5SPW0 Xlr5a-203ENSMUST00000114521 1474 ntTSL 5 BASIC9.08□□□□□ -0.96
Vps54Q5SPW0 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Vps54Q5SPW0 Gm43519-201ENSMUST00000197239 1872 ntBASIC9.08□□□□□ -0.96
Vps54Q5SPW0 Olfr381-204ENSMUST00000215358 2658 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Vps54Q5SPW0 Slc4a10-201ENSMUST00000054484 5320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Vps54Q5SPW0 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Vps54Q5SPW0 Narf-201ENSMUST00000103015 4395 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Vps54Q5SPW0 Tbc1d24-216ENSMUST00000202925 4216 ntTSL 5 BASIC9.08□□□□□ -0.96
Vps54Q5SPW0 AC164883.2-201ENSMUST00000227931 3815 ntBASIC9.08□□□□□ -0.96
Vps54Q5SPW0 Gm45512-201ENSMUST00000210432 1553 ntBASIC9.08□□□□□ -0.96
Vps54Q5SPW0 Pan2-206ENSMUST00000219721 4316 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Vps54Q5SPW0 Zfp652-202ENSMUST00000107717 10433 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Vps54Q5SPW0 St6galnac3-204ENSMUST00000200397 8169 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Vps54Q5SPW0 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Vps54Q5SPW0 Sipa1l1-201ENSMUST00000053969 7488 ntAPPRIS P3 TSL 5 BASIC9.08□□□□□ -0.96
Vps54Q5SPW0 Casp8-202ENSMUST00000165549 1917 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Vps54Q5SPW0 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Vps54Q5SPW0 Gm11928-201ENSMUST00000119323 437 ntBASIC9.08□□□□□ -0.96
Vps54Q5SPW0 Gm24893-201ENSMUST00000122745 369 ntBASIC9.08□□□□□ -0.96
Vps54Q5SPW0 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC9.08□□□□□ -0.96
Vps54Q5SPW0 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Vps54Q5SPW0 Gm11816-202ENSMUST00000149848 714 ntTSL 2 BASIC9.08□□□□□ -0.96
Vps54Q5SPW0 Gm22206-201ENSMUST00000158612 116 ntBASIC9.08□□□□□ -0.96
Vps54Q5SPW0 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Vps54Q5SPW0 Gm38254-201ENSMUST00000192276 1009 ntBASIC9.08□□□□□ -0.96
Vps54Q5SPW0 Gm37336-201ENSMUST00000192794 760 ntTSL 2 BASIC9.08□□□□□ -0.96
Vps54Q5SPW0 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC9.08□□□□□ -0.96
Vps54Q5SPW0 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Vps54Q5SPW0 Gm43558-201ENSMUST00000200155 210 ntBASIC9.08□□□□□ -0.96
Vps54Q5SPW0 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Vps54Q5SPW0 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC9.08□□□□□ -0.96
Vps54Q5SPW0 AC110176.1-201ENSMUST00000226219 504 ntBASIC9.08□□□□□ -0.96
Vps54Q5SPW0 AC154838.3-201ENSMUST00000228876 965 ntBASIC9.08□□□□□ -0.96
Vps54Q5SPW0 Odf3l1-201ENSMUST00000055036 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Vps54Q5SPW0 Olfr401-201ENSMUST00000079827 948 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Vps54Q5SPW0 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Vps54Q5SPW0 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Vps54Q5SPW0 Olfr1462-202ENSMUST00000208533 3424 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
Vps54Q5SPW0 Slc17a3-202ENSMUST00000091698 1759 ntTSL 5 BASIC9.08□□□□□ -0.96
Vps54Q5SPW0 Gli3-201ENSMUST00000110510 8170 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Vps54Q5SPW0 Pnisr-201ENSMUST00000029911 4545 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Vps54Q5SPW0 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Vps54Q5SPW0 Nlgn3-202ENSMUST00000118111 8004 ntTSL 5 BASIC9.08□□□□□ -0.96
Vps54Q5SPW0 Gm18908-201ENSMUST00000207125 1483 ntBASIC9.08□□□□□ -0.96
Vps54Q5SPW0 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Vps54Q5SPW0 Cflar-205ENSMUST00000114313 6572 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Vps54Q5SPW0 Map3k7-203ENSMUST00000108183 5416 ntTSL 5 BASIC9.07□□□□□ -0.96
Vps54Q5SPW0 Pkd1l1-203ENSMUST00000178195 6213 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Vps54Q5SPW0 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Vps54Q5SPW0 Olfr523-206ENSMUST00000216023 3940 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Vps54Q5SPW0 Slc12a1-201ENSMUST00000028630 4645 ntAPPRIS P5 TSL 1 (best) BASIC9.07□□□□□ -0.96
Vps54Q5SPW0 Gm43254-201ENSMUST00000199187 2491 ntBASIC9.07□□□□□ -0.96
Vps54Q5SPW0 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Vps54Q5SPW0 Mettl15-201ENSMUST00000081631 1894 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Vps54Q5SPW0 Olfr766-ps1-201ENSMUST00000204515 2909 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Vps54Q5SPW0 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Vps54Q5SPW0 Gm13224-201ENSMUST00000119586 94 ntBASIC9.07□□□□□ -0.96
Vps54Q5SPW0 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Vps54Q5SPW0 Gm14319-201ENSMUST00000142937 703 ntTSL 2 BASIC9.07□□□□□ -0.96
Vps54Q5SPW0 Lrrc51-210ENSMUST00000163903 939 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Vps54Q5SPW0 Gm17047-201ENSMUST00000167709 430 ntBASIC9.07□□□□□ -0.96
Vps54Q5SPW0 Gm5445-201ENSMUST00000180224 480 ntBASIC9.07□□□□□ -0.96
Vps54Q5SPW0 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC9.07□□□□□ -0.96
Vps54Q5SPW0 Gm28894-201ENSMUST00000185214 615 ntBASIC9.07□□□□□ -0.96
Vps54Q5SPW0 Gm21181-201ENSMUST00000186249 330 ntBASIC9.07□□□□□ -0.96
Vps54Q5SPW0 Gm37369-201ENSMUST00000194179 615 ntBASIC9.07□□□□□ -0.96
Vps54Q5SPW0 Prkar2a-206ENSMUST00000195405 1143 ntTSL 5 BASIC9.07□□□□□ -0.96
Vps54Q5SPW0 Gm44356-201ENSMUST00000196731 111 ntBASIC9.07□□□□□ -0.96
Vps54Q5SPW0 Gm43108-201ENSMUST00000200525 293 ntBASIC9.07□□□□□ -0.96
Vps54Q5SPW0 Gm44380-201ENSMUST00000203125 293 ntBASIC9.07□□□□□ -0.96
Vps54Q5SPW0 Gm44036-201ENSMUST00000204551 336 ntTSL 3 BASIC9.07□□□□□ -0.96
Vps54Q5SPW0 4930425L21Rik-202ENSMUST00000205073 871 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms