Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 CT030185.1-201ENSMUST00000222940 2289 ntBASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Gm24665-201ENSMUST00000104160 129 ntBASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Gm23266-201ENSMUST00000104444 134 ntBASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Rita1-202ENSMUST00000111884 733 ntTSL 2 BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Fhl1-206ENSMUST00000116596 1203 ntTSL 5 BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Gm11191-201ENSMUST00000117231 610 ntBASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Dnmt3l-ps1-201ENSMUST00000118734 1253 ntBASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Gm14466-201ENSMUST00000119028 451 ntBASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Gm11245-201ENSMUST00000119419 1037 ntBASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Vpreb3-202ENSMUST00000121151 729 ntAPPRIS ALT2 TSL 3 BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Gm14380-201ENSMUST00000122298 431 ntBASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Gm24382-201ENSMUST00000122698 107 ntBASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Gm22987-201ENSMUST00000122757 246 ntBASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 AV099323-201ENSMUST00000124336 921 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 1700018A04Rik-203ENSMUST00000150418 706 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Gm26211-201ENSMUST00000158578 129 ntBASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Gm6586-201ENSMUST00000167028 643 ntBASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Gm8857-201ENSMUST00000170064 1102 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Pax4-205ENSMUST00000174194 974 ntTSL 5 BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Mir5114-201ENSMUST00000175574 61 ntBASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 n-R5s210-201ENSMUST00000177688 119 ntBASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Gm26623-201ENSMUST00000180911 850 ntTSL 5 BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Gm6946-201ENSMUST00000182237 987 ntBASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 2210420H20Rik-201ENSMUST00000188435 629 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Gm29572-201ENSMUST00000190305 283 ntTSL 5 BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Gm29068-201ENSMUST00000191607 400 ntBASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Gm37355-201ENSMUST00000193345 606 ntBASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Gm44607-201ENSMUST00000205611 1090 ntBASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Gm7482-201ENSMUST00000206446 505 ntBASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Zfp787-203ENSMUST00000207331 376 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Gm7210-201ENSMUST00000209309 1067 ntBASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Gm39132-201ENSMUST00000210446 429 ntTSL 3 BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Flt3l-210ENSMUST00000211246 852 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 AC133947.1-201ENSMUST00000213336 614 ntTSL 3 BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Gm31698-201ENSMUST00000214227 430 ntTSL 2 BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Gm35696-202ENSMUST00000220364 778 ntTSL 5 BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 AC121137.1-201ENSMUST00000225272 602 ntBASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 AC140406.3-201ENSMUST00000227619 478 ntBASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 AC114585.2-201ENSMUST00000227693 486 ntBASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Slurp2-201ENSMUST00000057932 545 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Gm24919-201ENSMUST00000083020 106 ntBASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Gm25483-201ENSMUST00000083224 227 ntBASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Gm42514-201ENSMUST00000196636 1832 ntBASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Kcnip4-206ENSMUST00000175660 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Gm37772-201ENSMUST00000191635 1394 ntBASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Gm43328-201ENSMUST00000198544 1434 ntBASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Gm44863-201ENSMUST00000207613 1422 ntBASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 AC122346.1-201ENSMUST00000225266 3732 ntBASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Robo2-210ENSMUST00000226478 8059 ntBASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 Pglyrp4-203ENSMUST00000169698 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cks1brtQ3UNC9 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cks1brtQ3UNC9 AC154270.2-201ENSMUST00000226755 2306 ntBASIC5.37□□□□□ -1.55
Cks1brtQ3UNC9 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
Cks1brtQ3UNC9 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Cks1brtQ3UNC9 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Cks1brtQ3UNC9 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC5.37□□□□□ -1.55
Cks1brtQ3UNC9 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Cks1brtQ3UNC9 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cks1brtQ3UNC9 Gm9436-201ENSMUST00000120949 1855 ntBASIC5.37□□□□□ -1.55
Cks1brtQ3UNC9 Gm11855-201ENSMUST00000121562 1869 ntBASIC5.37□□□□□ -1.55
Cks1brtQ3UNC9 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms