Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Pdgfra-208ENSMUST00000202681 2876 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Col8a1Q00780 Nipsnap3a-202ENSMUST00000107666 1553 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Col8a1Q00780 Ceacam19-201ENSMUST00000052605 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col8a1Q00780 Ppp1r3b-202ENSMUST00000210337 4349 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
Col8a1Q00780 Kif3c-204ENSMUST00000219895 2962 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Col8a1Q00780 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Col8a1Q00780 Gja1-201ENSMUST00000068581 3071 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col8a1Q00780 3830408C21Rik-202ENSMUST00000223895 1689 ntBASIC6.91□□□□□ -1.3
Col8a1Q00780 Grik1-202ENSMUST00000072256 3655 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Col8a1Q00780 Zhx3-202ENSMUST00000103112 9109 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col8a1Q00780 Nup98-203ENSMUST00000210682 6694 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Col8a1Q00780 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col8a1Q00780 Serpina3h-202ENSMUST00000116393 1226 ntBASIC6.91□□□□□ -1.3
Col8a1Q00780 Gm12697-201ENSMUST00000118008 667 ntBASIC6.91□□□□□ -1.3
Col8a1Q00780 Gm14388-201ENSMUST00000118119 477 ntBASIC6.91□□□□□ -1.3
Col8a1Q00780 Gm11969-201ENSMUST00000118848 356 ntBASIC6.91□□□□□ -1.3
Col8a1Q00780 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC6.91□□□□□ -1.3
Col8a1Q00780 Gm14170-201ENSMUST00000133751 331 ntTSL 3 BASIC6.91□□□□□ -1.3
Col8a1Q00780 Gm16212-201ENSMUST00000136190 282 ntTSL 5 BASIC6.91□□□□□ -1.3
Col8a1Q00780 Gm14368-201ENSMUST00000145305 415 ntBASIC6.91□□□□□ -1.3
Col8a1Q00780 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC6.91□□□□□ -1.3
Col8a1Q00780 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col8a1Q00780 Gm6465-201ENSMUST00000168154 1098 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Col8a1Q00780 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC6.91□□□□□ -1.3
Col8a1Q00780 Mthfr-ps1-201ENSMUST00000174153 601 ntBASIC6.91□□□□□ -1.3
Col8a1Q00780 Gm21886-201ENSMUST00000178391 645 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Col8a1Q00780 Tdgf1-ps1-201ENSMUST00000179882 516 ntBASIC6.91□□□□□ -1.3
Col8a1Q00780 Gm21430-201ENSMUST00000182998 998 ntBASIC6.91□□□□□ -1.3
Col8a1Q00780 Gm10637-201ENSMUST00000183718 828 ntTSL 3 BASIC6.91□□□□□ -1.3
Col8a1Q00780 Gm18800-202ENSMUST00000188688 1105 ntBASIC6.91□□□□□ -1.3
Col8a1Q00780 Gm29230-201ENSMUST00000189687 412 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Col8a1Q00780 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC6.91□□□□□ -1.3
Col8a1Q00780 Gm38201-201ENSMUST00000192143 387 ntBASIC6.91□□□□□ -1.3
Col8a1Q00780 Gm44392-201ENSMUST00000196758 115 ntBASIC6.91□□□□□ -1.3
Col8a1Q00780 Gm18422-201ENSMUST00000203663 1032 ntBASIC6.91□□□□□ -1.3
Col8a1Q00780 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC6.91□□□□□ -1.3
Col8a1Q00780 Gm44128-201ENSMUST00000204909 219 ntBASIC6.91□□□□□ -1.3
Col8a1Q00780 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC6.91□□□□□ -1.3
Col8a1Q00780 Gm10688-201ENSMUST00000214985 520 ntBASIC6.91□□□□□ -1.3
Col8a1Q00780 AC127302.1-201ENSMUST00000215973 1111 ntBASIC6.91□□□□□ -1.3
Col8a1Q00780 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Col8a1Q00780 Gm4898-201ENSMUST00000218519 832 ntBASIC6.91□□□□□ -1.3
Col8a1Q00780 AC166358.1-201ENSMUST00000220677 105 ntBASIC6.91□□□□□ -1.3
Col8a1Q00780 AC153662.2-201ENSMUST00000221097 120 ntBASIC6.91□□□□□ -1.3
Col8a1Q00780 AC156037.2-201ENSMUST00000221284 112 ntBASIC6.91□□□□□ -1.3
Col8a1Q00780 AC166341.6-201ENSMUST00000221528 105 ntBASIC6.91□□□□□ -1.3
Col8a1Q00780 CT030242.1-201ENSMUST00000221945 125 ntBASIC6.91□□□□□ -1.3
Col8a1Q00780 AC124772.2-201ENSMUST00000222049 154 ntBASIC6.91□□□□□ -1.3
Col8a1Q00780 AC153663.1-201ENSMUST00000222165 120 ntBASIC6.91□□□□□ -1.3
Col8a1Q00780 CT030157.1-201ENSMUST00000222355 148 ntBASIC6.91□□□□□ -1.3
Col8a1Q00780 AC150661.2-201ENSMUST00000222418 105 ntBASIC6.91□□□□□ -1.3
Col8a1Q00780 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Col8a1Q00780 Gm40598-201ENSMUST00000222953 547 ntBASIC6.91□□□□□ -1.3
Col8a1Q00780 Gm18631-201ENSMUST00000223125 1043 ntBASIC6.91□□□□□ -1.3
Col8a1Q00780 AC127242.2-201ENSMUST00000223138 148 ntBASIC6.91□□□□□ -1.3
Col8a1Q00780 AC207128.2-202ENSMUST00000224010 808 ntBASIC6.91□□□□□ -1.3
Col8a1Q00780 AC192333.4-201ENSMUST00000224269 981 ntBASIC6.91□□□□□ -1.3
Col8a1Q00780 AC101205.1-201ENSMUST00000227916 907 ntBASIC6.91□□□□□ -1.3
Col8a1Q00780 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col8a1Q00780 Gm5619-201ENSMUST00000071172 760 ntBASIC6.91□□□□□ -1.3
Col8a1Q00780 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col8a1Q00780 Tubgcp5-201ENSMUST00000032627 3905 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col8a1Q00780 Ston1-207ENSMUST00000163588 2983 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col8a1Q00780 Wdr72-201ENSMUST00000055879 5196 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col8a1Q00780 Lrrc49-202ENSMUST00000065603 3017 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Col8a1Q00780 Gm28451-201ENSMUST00000189311 2560 ntBASIC6.91□□□□□ -1.3
Col8a1Q00780 Zfp438-201ENSMUST00000063989 3209 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col8a1Q00780 Gm11868-201ENSMUST00000121594 1478 ntBASIC6.91□□□□□ -1.3
Col8a1Q00780 4933427E13Rik-202ENSMUST00000125234 1493 ntTSL 2 BASIC6.91□□□□□ -1.3
Col8a1Q00780 Svil-210ENSMUST00000140448 7423 ntAPPRIS P3 TSL 5 BASIC6.91□□□□□ -1.3
Col8a1Q00780 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Col8a1Q00780 Sh2d2a-201ENSMUST00000029709 4484 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col8a1Q00780 Gm45294-201ENSMUST00000210685 2102 ntBASIC6.91□□□□□ -1.3
Col8a1Q00780 Exd1-203ENSMUST00000171024 5290 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col8a1Q00780 Tnip3-208ENSMUST00000212402 1577 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Col8a1Q00780 Zfp93-202ENSMUST00000108438 3508 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Col8a1Q00780 Gm16701-201ENSMUST00000181309 1627 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Col8a1Q00780 Gm45025-201ENSMUST00000206043 2389 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Col8a1Q00780 Gm37570-201ENSMUST00000195411 3106 ntBASIC6.9□□□□□ -1.3
Col8a1Q00780 Nsun3-201ENSMUST00000063089 3813 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Col8a1Q00780 Ap3b2-201ENSMUST00000082090 3804 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Col8a1Q00780 Efcab3-201ENSMUST00000021029 1757 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Col8a1Q00780 Gm31614-201ENSMUST00000215504 3231 ntTSL 5 BASIC6.9□□□□□ -1.3
Col8a1Q00780 Zfp260-201ENSMUST00000050735 4006 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Col8a1Q00780 Gm34730-201ENSMUST00000210674 4077 ntTSL 5 BASIC6.9□□□□□ -1.3
Col8a1Q00780 Gm16638-202ENSMUST00000208892 8508 ntTSL 5 BASIC6.9□□□□□ -1.3
Col8a1Q00780 Dlk1-206ENSMUST00000109846 4106 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Col8a1Q00780 Kirrel3-206ENSMUST00000187625 4108 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Col8a1Q00780 Mynn-201ENSMUST00000047502 3394 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Col8a1Q00780 Slc4a8-201ENSMUST00000023776 11790 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
Col8a1Q00780 Gm8173-201ENSMUST00000186797 1977 ntBASIC6.9□□□□□ -1.3
Col8a1Q00780 AC093043.2-201ENSMUST00000228616 2017 ntBASIC6.9□□□□□ -1.3
Col8a1Q00780 Zfp408-202ENSMUST00000111333 3740 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
Col8a1Q00780 Igkv1-117-201ENSMUST00000103317 404 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Col8a1Q00780 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Col8a1Q00780 Gm22543-201ENSMUST00000104347 94 ntBASIC6.9□□□□□ -1.3
Col8a1Q00780 Gm14906-201ENSMUST00000119265 390 ntBASIC6.9□□□□□ -1.3
Col8a1Q00780 Rhox3g-201ENSMUST00000119965 991 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Col8a1Q00780 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC6.9□□□□□ -1.3
Col8a1Q00780 Gm11809-201ENSMUST00000120923 950 ntBASIC6.9□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms