Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm45202-201ENSMUST00000205955 332 ntTSL 3 BASIC8.16□□□□□ -1.1
Usp4P35123 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Usp4P35123 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC8.16□□□□□ -1.1
Usp4P35123 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Usp4P35123 AC155259.1-201ENSMUST00000214794 477 ntBASIC8.16□□□□□ -1.1
Usp4P35123 AC160635.1-201ENSMUST00000216731 474 ntBASIC8.16□□□□□ -1.1
Usp4P35123 Gm40421-201ENSMUST00000218991 658 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Usp4P35123 Gm9110-201ENSMUST00000219035 617 ntBASIC8.16□□□□□ -1.1
Usp4P35123 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Usp4P35123 Gm7239-201ENSMUST00000220981 860 ntBASIC8.16□□□□□ -1.1
Usp4P35123 4930555G21Rik-201ENSMUST00000221718 537 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Usp4P35123 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC8.16□□□□□ -1.1
Usp4P35123 AC125543.2-201ENSMUST00000222114 105 ntBASIC8.16□□□□□ -1.1
Usp4P35123 CT030170.7-201ENSMUST00000223372 103 ntBASIC8.16□□□□□ -1.1
Usp4P35123 CT010505.3-201ENSMUST00000227835 1651 ntBASIC8.16□□□□□ -1.1
Usp4P35123 Gm5564-201ENSMUST00000034916 967 ntBASIC8.16□□□□□ -1.1
Usp4P35123 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Usp4P35123 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Usp4P35123 Lyrm2-201ENSMUST00000062802 465 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Usp4P35123 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Usp4P35123 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC8.16□□□□□ -1.1
Usp4P35123 Kctd16-201ENSMUST00000091927 1349 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Usp4P35123 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Usp4P35123 Itgae-202ENSMUST00000102537 3825 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Usp4P35123 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Usp4P35123 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Usp4P35123 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Usp4P35123 Gm13301-201ENSMUST00000121728 2446 ntBASIC8.15□□□□□ -1.1
Usp4P35123 Adarb2-201ENSMUST00000064473 6721 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Usp4P35123 Gm42636-201ENSMUST00000197174 2239 ntBASIC8.15□□□□□ -1.1
Usp4P35123 Gm37611-201ENSMUST00000195250 2028 ntBASIC8.15□□□□□ -1.1
Usp4P35123 Olfr150-202ENSMUST00000217257 1867 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Usp4P35123 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC8.15□□□□□ -1.1
Usp4P35123 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC8.15□□□□□ -1.1
Usp4P35123 Myo3b-203ENSMUST00000112243 6213 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Usp4P35123 Etnppl-202ENSMUST00000163620 1482 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Usp4P35123 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC8.15□□□□□ -1.1
Usp4P35123 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Usp4P35123 Phc3-210ENSMUST00000177992 2920 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Usp4P35123 Klf10-202ENSMUST00000226363 2917 ntBASIC8.15□□□□□ -1.1
Usp4P35123 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Usp4P35123 Gm39526-201ENSMUST00000208925 1413 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Usp4P35123 Fancd2os-201ENSMUST00000035870 1358 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Usp4P35123 D930007P13Rik-201ENSMUST00000181306 1324 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Usp4P35123 Gm13682-201ENSMUST00000117524 702 ntBASIC8.15□□□□□ -1.1
Usp4P35123 Gm13325-201ENSMUST00000118746 806 ntBASIC8.15□□□□□ -1.1
Usp4P35123 Mup-ps15-201ENSMUST00000121741 539 ntBASIC8.15□□□□□ -1.1
Usp4P35123 A230072E10Rik-201ENSMUST00000146161 676 ntTSL 5 BASIC8.15□□□□□ -1.1
Usp4P35123 4930599N23Rik-201ENSMUST00000146981 880 ntTSL 2 BASIC8.15□□□□□ -1.1
Usp4P35123 Gm26048-201ENSMUST00000157305 142 ntBASIC8.15□□□□□ -1.1
Usp4P35123 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC8.15□□□□□ -1.1
Usp4P35123 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Usp4P35123 Apol11a-201ENSMUST00000172191 1132 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Usp4P35123 Gm17157-201ENSMUST00000172397 348 ntBASIC8.15□□□□□ -1.1
Usp4P35123 Mir6972-201ENSMUST00000184774 64 ntBASIC8.15□□□□□ -1.1
Usp4P35123 Plet1-202ENSMUST00000188047 739 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Usp4P35123 Gm28428-201ENSMUST00000188886 697 ntBASIC8.15□□□□□ -1.1
Usp4P35123 Gm29491-201ENSMUST00000189481 506 ntTSL 5 BASIC8.15□□□□□ -1.1
Usp4P35123 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC8.15□□□□□ -1.1
Usp4P35123 Scp2-ps1-201ENSMUST00000193152 499 ntBASIC8.15□□□□□ -1.1
Usp4P35123 Gm17530-201ENSMUST00000194336 472 ntBASIC8.15□□□□□ -1.1
Usp4P35123 Gm37371-201ENSMUST00000194837 392 ntBASIC8.15□□□□□ -1.1
Usp4P35123 Gm9729-201ENSMUST00000196364 265 ntBASIC8.15□□□□□ -1.1
Usp4P35123 Gm43805-201ENSMUST00000198488 824 ntBASIC8.15□□□□□ -1.1
Usp4P35123 Gm18330-201ENSMUST00000199246 547 ntBASIC8.15□□□□□ -1.1
Usp4P35123 Gm43837-201ENSMUST00000200306 668 ntTSL 5 BASIC8.15□□□□□ -1.1
Usp4P35123 Gm43694-201ENSMUST00000200773 1119 ntBASIC8.15□□□□□ -1.1
Usp4P35123 Gm42887-201ENSMUST00000202469 1119 ntBASIC8.15□□□□□ -1.1
Usp4P35123 Gm44096-201ENSMUST00000203171 504 ntTSL 2 BASIC8.15□□□□□ -1.1
Usp4P35123 Gm6308-201ENSMUST00000203226 313 ntBASIC8.15□□□□□ -1.1
Usp4P35123 Tmem147-206ENSMUST00000208169 537 ntTSL 5 BASIC8.15□□□□□ -1.1
Usp4P35123 Gm8575-201ENSMUST00000210262 521 ntBASIC8.15□□□□□ -1.1
Usp4P35123 Ldhc-204ENSMUST00000210585 1071 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Usp4P35123 Gm45701-201ENSMUST00000212049 235 ntBASIC8.15□□□□□ -1.1
Usp4P35123 Vmn2r-ps91-201ENSMUST00000213039 784 ntBASIC8.15□□□□□ -1.1
Usp4P35123 AC161250.1-201ENSMUST00000213426 1111 ntBASIC8.15□□□□□ -1.1
Usp4P35123 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC8.15□□□□□ -1.1
Usp4P35123 AC153937.3-201ENSMUST00000217814 706 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Usp4P35123 Ldah-206ENSMUST00000218086 1159 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Usp4P35123 AC153532.1-201ENSMUST00000218126 1111 ntBASIC8.15□□□□□ -1.1
Usp4P35123 Gm19810-201ENSMUST00000218521 251 ntBASIC8.15□□□□□ -1.1
Usp4P35123 AC158531.2-201ENSMUST00000224264 473 ntBASIC8.15□□□□□ -1.1
Usp4P35123 AC207128.1-201ENSMUST00000225928 799 ntBASIC8.15□□□□□ -1.1
Usp4P35123 Tmem216-201ENSMUST00000025569 1101 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Usp4P35123 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Usp4P35123 Ppbp-201ENSMUST00000031319 1083 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Usp4P35123 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Usp4P35123 Cox8c-201ENSMUST00000053611 458 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Usp4P35123 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
Usp4P35123 Insig2-202ENSMUST00000071064 1292 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Usp4P35123 Gm10155-201ENSMUST00000084598 483 ntBASIC8.15□□□□□ -1.1
Usp4P35123 Mir486-201ENSMUST00000093576 128 ntBASIC8.15□□□□□ -1.1
Usp4P35123 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Usp4P35123 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Usp4P35123 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.1
Usp4P35123 Frrs1-202ENSMUST00000195905 6823 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Usp4P35123 Ston1-201ENSMUST00000064035 3287 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.11
Usp4P35123 Tmem33-202ENSMUST00000160352 5322 ntAPPRIS ALT1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Usp4P35123 Gm30400-202ENSMUST00000210562 2115 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Usp4P35123 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms