Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx1P18111 Olfm5-201ENSMUST00000051137 2268 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx1P18111 Gm43728-201ENSMUST00000198817 2622 ntBASIC6.23□□□□□ -1.41
Cdx1P18111 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Cdx1P18111 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Cdx1P18111 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx1P18111 9530052C20Rik-201ENSMUST00000181882 1372 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx1P18111 Fancd2os-201ENSMUST00000035870 1358 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx1P18111 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
Cdx1P18111 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx1P18111 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx1P18111 Gm15753-201ENSMUST00000119241 1062 ntBASIC6.23□□□□□ -1.41
Cdx1P18111 Gm12727-201ENSMUST00000119885 359 ntBASIC6.23□□□□□ -1.41
Cdx1P18111 Gm15571-201ENSMUST00000119887 637 ntBASIC6.23□□□□□ -1.41
Cdx1P18111 Gm14141-201ENSMUST00000120236 783 ntBASIC6.23□□□□□ -1.41
Cdx1P18111 Gm15192-201ENSMUST00000121005 293 ntBASIC6.23□□□□□ -1.41
Cdx1P18111 Gm14425-201ENSMUST00000121240 606 ntBASIC6.23□□□□□ -1.41
Cdx1P18111 Gm15179-202ENSMUST00000152799 671 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx1P18111 Gm24063-201ENSMUST00000157491 105 ntBASIC6.23□□□□□ -1.41
Cdx1P18111 Gm26040-201ENSMUST00000158147 161 ntBASIC6.23□□□□□ -1.41
Cdx1P18111 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC6.23□□□□□ -1.41
Cdx1P18111 Gm15756-201ENSMUST00000161447 670 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx1P18111 Gm25442-201ENSMUST00000177270 92 ntBASIC6.23□□□□□ -1.41
Cdx1P18111 Gm27043-201ENSMUST00000182807 958 ntBASIC6.23□□□□□ -1.41
Cdx1P18111 Gm19872-201ENSMUST00000183446 687 ntTSL 2 BASIC6.23□□□□□ -1.41
Cdx1P18111 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC6.23□□□□□ -1.41
Cdx1P18111 Gm35067-201ENSMUST00000194355 647 ntBASIC6.23□□□□□ -1.41
Cdx1P18111 Tmigd3-206ENSMUST00000199977 838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx1P18111 Gm42745-201ENSMUST00000200904 193 ntTSL 3 BASIC6.23□□□□□ -1.41
Cdx1P18111 Gm33926-201ENSMUST00000208755 357 ntTSL 2 BASIC6.23□□□□□ -1.41
Cdx1P18111 Gm10451-202ENSMUST00000219367 855 ntTSL 2 BASIC6.23□□□□□ -1.41
Cdx1P18111 A930040O22Rik-201ENSMUST00000221662 973 ntBASIC6.23□□□□□ -1.41
Cdx1P18111 Mfap5-201ENSMUST00000032210 946 ntTSL 3 BASIC6.23□□□□□ -1.41
Cdx1P18111 5330417H12Rik-201ENSMUST00000060348 1191 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Cdx1P18111 Klrc2-201ENSMUST00000071920 1098 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Cdx1P18111 2010109I03Rik-201ENSMUST00000077004 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx1P18111 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx1P18111 AC122539.3-201ENSMUST00000218355 1431 ntBASIC6.23□□□□□ -1.41
Cdx1P18111 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx1P18111 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx1P18111 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx1P18111 AC112680.1-201ENSMUST00000215435 1349 ntBASIC6.23□□□□□ -1.41
Cdx1P18111 Gm43280-201ENSMUST00000202958 1550 ntBASIC6.23□□□□□ -1.41
Cdx1P18111 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx1P18111 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Cdx1P18111 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx1P18111 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
Cdx1P18111 AC122426.2-201ENSMUST00000216522 2947 ntBASIC6.22□□□□□ -1.41
Cdx1P18111 AC139754.2-201ENSMUST00000218037 1455 ntBASIC6.22□□□□□ -1.41
Cdx1P18111 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdx1P18111 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdx1P18111 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Cdx1P18111 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Cdx1P18111 Spata1-202ENSMUST00000093951 2712 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Cdx1P18111 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Cdx1P18111 Trmt2b-202ENSMUST00000087541 3119 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdx1P18111 Gm43022-201ENSMUST00000197067 4268 ntBASIC6.22□□□□□ -1.41
Cdx1P18111 Gm44723-201ENSMUST00000207369 4000 ntBASIC6.22□□□□□ -1.41
Cdx1P18111 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Cdx1P18111 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdx1P18111 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdx1P18111 Gas2l3-201ENSMUST00000099374 6748 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdx1P18111 Gm42597-201ENSMUST00000196663 1544 ntBASIC6.22□□□□□ -1.41
Cdx1P18111 Tmem91-202ENSMUST00000108404 485 ntTSL 5 BASIC6.22□□□□□ -1.41
Cdx1P18111 Lypd8-202ENSMUST00000108826 1219 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdx1P18111 Efcab9-202ENSMUST00000109377 615 ntAPPRIS ALT2 TSL 3 BASIC6.22□□□□□ -1.41
Cdx1P18111 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Cdx1P18111 Gm15578-201ENSMUST00000117320 475 ntBASIC6.22□□□□□ -1.41
Cdx1P18111 Amd-ps4-201ENSMUST00000118392 1003 ntBASIC6.22□□□□□ -1.41
Cdx1P18111 Gm14131-201ENSMUST00000119636 719 ntBASIC6.22□□□□□ -1.41
Cdx1P18111 Gm12312-201ENSMUST00000120351 644 ntBASIC6.22□□□□□ -1.41
Cdx1P18111 Gm12089-201ENSMUST00000138402 428 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Cdx1P18111 Gm13872-203ENSMUST00000147082 657 ntTSL 3 BASIC6.22□□□□□ -1.41
Cdx1P18111 1700034H15Rik-205ENSMUST00000154116 926 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Cdx1P18111 Gm15833-201ENSMUST00000161563 957 ntBASIC6.22□□□□□ -1.41
Cdx1P18111 Gm20491-201ENSMUST00000173765 1241 ntBASIC6.22□□□□□ -1.41
Cdx1P18111 Gm23413-201ENSMUST00000175521 125 ntBASIC6.22□□□□□ -1.41
Cdx1P18111 Atpaf1-202ENSMUST00000175725 996 ntTSL 5 BASIC6.22□□□□□ -1.41
Cdx1P18111 Gm20914-201ENSMUST00000180372 684 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Cdx1P18111 Fendrr-201ENSMUST00000181231 1092 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Cdx1P18111 2610001J05Rik-204ENSMUST00000185361 767 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
Cdx1P18111 1700124L16Rik-203ENSMUST00000190077 1110 ntBASIC6.22□□□□□ -1.41
Cdx1P18111 Gm38164-201ENSMUST00000192810 330 ntBASIC6.22□□□□□ -1.41
Cdx1P18111 Gm38188-201ENSMUST00000192879 856 ntBASIC6.22□□□□□ -1.41
Cdx1P18111 Gm37152-201ENSMUST00000193369 1175 ntBASIC6.22□□□□□ -1.41
Cdx1P18111 Gm37306-201ENSMUST00000193447 1233 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Cdx1P18111 Zc2hc1b-201ENSMUST00000019954 1157 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdx1P18111 Gm38405-201ENSMUST00000207760 1140 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Cdx1P18111 Rps3-205ENSMUST00000208532 489 ntTSL 5 BASIC6.22□□□□□ -1.41
Cdx1P18111 Gm45698-201ENSMUST00000208537 1135 ntBASIC6.22□□□□□ -1.41
Cdx1P18111 Gm45475-201ENSMUST00000209381 309 ntBASIC6.22□□□□□ -1.41
Cdx1P18111 Gm32220-201ENSMUST00000218420 298 ntBASIC6.22□□□□□ -1.41
Cdx1P18111 AC154904.1-201ENSMUST00000219510 312 ntBASIC6.22□□□□□ -1.41
Cdx1P18111 AC156576.1-201ENSMUST00000222315 500 ntTSL 5 BASIC6.22□□□□□ -1.41
Cdx1P18111 AC165260.5-201ENSMUST00000224640 1247 ntBASIC6.22□□□□□ -1.41
Cdx1P18111 AC124709.1-201ENSMUST00000227296 620 ntBASIC6.22□□□□□ -1.41
Cdx1P18111 AC164879.1-201ENSMUST00000227904 1021 ntBASIC6.22□□□□□ -1.41
Cdx1P18111 Fabp3-ps1-201ENSMUST00000070435 402 ntBASIC6.22□□□□□ -1.41
Cdx1P18111 Gm10036-201ENSMUST00000079733 537 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Cdx1P18111 Rps25-201ENSMUST00000080300 1280 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 93.2 ms