Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gm29601-201ENSMUST00000187961 1349 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CopeO89079 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
CopeO89079 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CopeO89079 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CopeO89079 Gm6101-201ENSMUST00000195384 1867 ntBASIC7.72□□□□□ -1.17
CopeO89079 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
CopeO89079 Gm42636-201ENSMUST00000197174 2239 ntBASIC7.72□□□□□ -1.17
CopeO89079 Gm12253-201ENSMUST00000108825 1356 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
CopeO89079 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CopeO89079 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
CopeO89079 Gm42603-201ENSMUST00000199893 2146 ntBASIC7.72□□□□□ -1.17
CopeO89079 Gm15624-201ENSMUST00000145420 1405 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CopeO89079 Gimd1-201ENSMUST00000163241 1413 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
CopeO89079 Gm9256-201ENSMUST00000198106 1420 ntBASIC7.72□□□□□ -1.17
CopeO89079 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CopeO89079 Gm37968-201ENSMUST00000195131 3201 ntBASIC7.72□□□□□ -1.17
CopeO89079 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CopeO89079 Mir467f-201ENSMUST00000116923 120 ntBASIC7.72□□□□□ -1.17
CopeO89079 Gm16221-201ENSMUST00000117331 393 ntBASIC7.72□□□□□ -1.17
CopeO89079 n-R5s76-201ENSMUST00000122700 113 ntBASIC7.72□□□□□ -1.17
CopeO89079 Wdr61-205ENSMUST00000130368 1162 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CopeO89079 n-R5s115-201ENSMUST00000179019 119 ntBASIC7.72□□□□□ -1.17
CopeO89079 Gm9381-201ENSMUST00000182285 1012 ntBASIC7.72□□□□□ -1.17
CopeO89079 Gm27008-202ENSMUST00000182414 604 ntTSL 3 BASIC7.72□□□□□ -1.17
CopeO89079 9330159M07Rik-204ENSMUST00000188156 737 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CopeO89079 Gm30275-201ENSMUST00000197620 498 ntTSL 2 BASIC7.72□□□□□ -1.17
CopeO89079 Gm4259-201ENSMUST00000206489 758 ntBASIC7.72□□□□□ -1.17
CopeO89079 Gm34006-201ENSMUST00000213985 655 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CopeO89079 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC7.72□□□□□ -1.17
CopeO89079 Gm39456-201ENSMUST00000214759 1019 ntTSL 5 BASIC7.72□□□□□ -1.17
CopeO89079 AC160931.1-201ENSMUST00000223298 413 ntTSL 3 BASIC7.72□□□□□ -1.17
CopeO89079 Cutal-202ENSMUST00000047447 1054 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CopeO89079 Wdr61-201ENSMUST00000051822 1187 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CopeO89079 Fam136b-ps-201ENSMUST00000068987 412 ntBASIC7.72□□□□□ -1.17
CopeO89079 n-R5s193-201ENSMUST00000082864 109 ntBASIC7.72□□□□□ -1.17
CopeO89079 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CopeO89079 Snhg17-209ENSMUST00000186993 3144 ntBASIC7.72□□□□□ -1.17
CopeO89079 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
CopeO89079 AC159264.1-201ENSMUST00000224844 4257 ntBASIC7.72□□□□□ -1.17
CopeO89079 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
CopeO89079 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC7.72□□□□□ -1.17
CopeO89079 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CopeO89079 Gm38288-201ENSMUST00000195330 1320 ntBASIC7.72□□□□□ -1.17
CopeO89079 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CopeO89079 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
CopeO89079 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC7.72□□□□□ -1.17
CopeO89079 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
CopeO89079 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CopeO89079 Slc4a10-202ENSMUST00000102735 5482 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
CopeO89079 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
CopeO89079 Lingo2-202ENSMUST00000098151 2781 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
CopeO89079 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
CopeO89079 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
CopeO89079 Zfp85os-201ENSMUST00000049518 2624 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
CopeO89079 4930448K20Rik-202ENSMUST00000182072 1433 ntBASIC7.71□□□□□ -1.17
CopeO89079 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
CopeO89079 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
CopeO89079 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC7.71□□□□□ -1.18
CopeO89079 Lrcol1-201ENSMUST00000100924 692 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
CopeO89079 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
CopeO89079 Gm15576-201ENSMUST00000117806 583 ntBASIC7.71□□□□□ -1.18
CopeO89079 Gm13776-201ENSMUST00000122236 1261 ntBASIC7.71□□□□□ -1.18
CopeO89079 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC7.71□□□□□ -1.18
CopeO89079 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CopeO89079 Gm7734-201ENSMUST00000182832 1011 ntBASIC7.71□□□□□ -1.18
CopeO89079 Gm8167-201ENSMUST00000183320 958 ntBASIC7.71□□□□□ -1.18
CopeO89079 Gm29416-202ENSMUST00000191328 1201 ntTSL 5 BASIC7.71□□□□□ -1.18
CopeO89079 Gm37929-201ENSMUST00000195116 493 ntBASIC7.71□□□□□ -1.18
CopeO89079 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC7.71□□□□□ -1.18
CopeO89079 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC7.71□□□□□ -1.18
CopeO89079 Gm45475-201ENSMUST00000209381 309 ntBASIC7.71□□□□□ -1.18
CopeO89079 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC7.71□□□□□ -1.18
CopeO89079 AC152946.3-201ENSMUST00000219424 280 ntBASIC7.71□□□□□ -1.18
CopeO89079 AC111092.1-201ENSMUST00000220181 411 ntTSL 3 BASIC7.71□□□□□ -1.18
CopeO89079 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
CopeO89079 AC100209.1-201ENSMUST00000225562 409 ntBASIC7.71□□□□□ -1.18
CopeO89079 AC154760.1-201ENSMUST00000227218 673 ntBASIC7.71□□□□□ -1.18
CopeO89079 AC152394.1-201ENSMUST00000227360 1086 ntBASIC7.71□□□□□ -1.18
CopeO89079 1700028K03Rik-201ENSMUST00000058921 797 ntAPPRIS P3 TSL 2 BASIC7.71□□□□□ -1.18
CopeO89079 Chn1-201ENSMUST00000070579 1023 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CopeO89079 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
CopeO89079 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CopeO89079 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC7.71□□□□□ -1.18
CopeO89079 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
CopeO89079 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC7.71□□□□□ -1.18
CopeO89079 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CopeO89079 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
CopeO89079 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CopeO89079 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CopeO89079 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC7.71□□□□□ -1.18
CopeO89079 A330058E17Rik-201ENSMUST00000200757 3890 ntBASIC7.71□□□□□ -1.18
CopeO89079 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CopeO89079 Olfr75-ps1-202ENSMUST00000141956 2500 ntTSL 2 BASIC7.71□□□□□ -1.18
CopeO89079 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
CopeO89079 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
CopeO89079 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
CopeO89079 5330416C01Rik-203ENSMUST00000144993 3287 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CopeO89079 A130023I24Rik-201ENSMUST00000152709 1897 ntTSL 2 BASIC7.7□□□□□ -1.18
CopeO89079 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CopeO89079 Dnajc8-202ENSMUST00000094657 1401 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms