Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc180J3QNE4 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc180J3QNE4 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC13.8□□□□□ -0.2
Ccdc180J3QNE4 Eya3-201ENSMUST00000020197 4976 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc180J3QNE4 Vmn2r55-202ENSMUST00000172743 2346 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc180J3QNE4 Slc3a1-201ENSMUST00000024944 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc180J3QNE4 Mcf2l-208ENSMUST00000110879 3664 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc180J3QNE4 Spag11b-202ENSMUST00000110767 1740 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc180J3QNE4 Rreb1-201ENSMUST00000037232 8395 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ccdc180J3QNE4 Gm38339-201ENSMUST00000195479 1829 ntBASIC13.79□□□□□ -0.2
Ccdc180J3QNE4 Adgrg7-201ENSMUST00000023437 2698 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc180J3QNE4 Gm10744-201ENSMUST00000220184 2706 ntBASIC13.79□□□□□ -0.2
Ccdc180J3QNE4 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC13.79□□□□□ -0.2
Ccdc180J3QNE4 Gm23018-201ENSMUST00000177928 109 ntBASIC13.79□□□□□ -0.2
Ccdc180J3QNE4 Gm27014-201ENSMUST00000182658 937 ntBASIC13.79□□□□□ -0.2
Ccdc180J3QNE4 Gm28070-201ENSMUST00000191502 445 ntBASIC13.79□□□□□ -0.2
Ccdc180J3QNE4 Gm43553-201ENSMUST00000200900 685 ntBASIC13.79□□□□□ -0.2
Ccdc180J3QNE4 Gm4585-201ENSMUST00000207218 452 ntBASIC13.79□□□□□ -0.2
Ccdc180J3QNE4 Gm18955-201ENSMUST00000223173 649 ntBASIC13.79□□□□□ -0.2
Ccdc180J3QNE4 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc180J3QNE4 Olfr523-204ENSMUST00000214272 3780 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Ccdc180J3QNE4 Krt39-202ENSMUST00000107445 1633 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ccdc180J3QNE4 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC13.79□□□□□ -0.2
Ccdc180J3QNE4 Ctnnd1-217ENSMUST00000111691 5380 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc180J3QNE4 AC160340.1-201ENSMUST00000222952 3964 ntBASIC13.79□□□□□ -0.2
Ccdc180J3QNE4 Zfp709-203ENSMUST00000188685 7186 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc180J3QNE4 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ccdc180J3QNE4 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC13.79□□□□□ -0.2
Ccdc180J3QNE4 Gm16138-201ENSMUST00000159341 821 ntBASIC13.79□□□□□ -0.2
Ccdc180J3QNE4 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC13.79□□□□□ -0.2
Ccdc180J3QNE4 Prom1-202ENSMUST00000074113 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc180J3QNE4 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC13.78□□□□□ -0.2
Ccdc180J3QNE4 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC13.78□□□□□ -0.2
Ccdc180J3QNE4 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc180J3QNE4 AC105958.1-201ENSMUST00000214783 2144 ntBASIC13.78□□□□□ -0.2
Ccdc180J3QNE4 Pnp-203ENSMUST00000048615 2942 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc180J3QNE4 Adgrl2-217ENSMUST00000200154 5412 ntTSL 5 BASIC13.78□□□□□ -0.2
Ccdc180J3QNE4 Herc3-202ENSMUST00000041401 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc180J3QNE4 Supt20-203ENSMUST00000197502 2751 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Ccdc180J3QNE4 Gm42546-201ENSMUST00000201584 2592 ntBASIC13.78□□□□□ -0.2
Ccdc180J3QNE4 Gm28469-201ENSMUST00000186374 2166 ntTSL 5 BASIC13.78□□□□□ -0.2
Ccdc180J3QNE4 Gm28134-201ENSMUST00000188690 2166 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc180J3QNE4 Gm37075-201ENSMUST00000191888 2166 ntTSL 5 BASIC13.78□□□□□ -0.2
Ccdc180J3QNE4 Gm37574-201ENSMUST00000194264 2166 ntTSL 5 BASIC13.78□□□□□ -0.2
Ccdc180J3QNE4 Olfr338-203ENSMUST00000217511 5724 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ccdc180J3QNE4 9530027J09Rik-201ENSMUST00000180584 1684 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc180J3QNE4 Gm32389-201ENSMUST00000209312 1621 ntTSL 3 BASIC13.78□□□□□ -0.2
Ccdc180J3QNE4 Dhx8-201ENSMUST00000039152 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc180J3QNE4 AC158799.1-204ENSMUST00000217441 1321 ntTSL 5 BASIC13.78□□□□□ -0.2
Ccdc180J3QNE4 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Ccdc180J3QNE4 Gm11858-201ENSMUST00000117935 838 ntBASIC13.78□□□□□ -0.2
Ccdc180J3QNE4 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC13.78□□□□□ -0.2
Ccdc180J3QNE4 Gm7651-201ENSMUST00000173398 901 ntBASIC13.78□□□□□ -0.2
Ccdc180J3QNE4 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC13.78□□□□□ -0.2
Ccdc180J3QNE4 Cbx3-ps6-201ENSMUST00000181108 552 ntBASIC13.78□□□□□ -0.2
Ccdc180J3QNE4 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC13.78□□□□□ -0.2
Ccdc180J3QNE4 Gm19410-201ENSMUST00000207505 6352 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ccdc180J3QNE4 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc180J3QNE4 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc180J3QNE4 Cbx3-ps7-201ENSMUST00000081455 552 ntBASIC13.78□□□□□ -0.2
Ccdc180J3QNE4 Hdac4-202ENSMUST00000097644 8100 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc180J3QNE4 Dcp1a-201ENSMUST00000022535 5576 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc180J3QNE4 Zkscan5-202ENSMUST00000085671 3794 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc180J3QNE4 Myadm-204ENSMUST00000203566 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccdc180J3QNE4 AI182371-207ENSMUST00000226972 1642 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.2
Ccdc180J3QNE4 Etl4-203ENSMUST00000114604 4786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccdc180J3QNE4 Gm6640-201ENSMUST00000120629 1587 ntBASIC13.77□□□□□ -0.2
Ccdc180J3QNE4 Garnl3-202ENSMUST00000102810 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccdc180J3QNE4 Pfkfb2-211ENSMUST00000189534 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccdc180J3QNE4 Stat2-202ENSMUST00000105238 4397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccdc180J3QNE4 Klf12-205ENSMUST00000228216 5890 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
Ccdc180J3QNE4 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Ccdc180J3QNE4 Gm2108-201ENSMUST00000165058 2177 ntBASIC13.77□□□□□ -0.21
Ccdc180J3QNE4 Gm7972-203ENSMUST00000209180 2184 ntTSL 3 BASIC13.77□□□□□ -0.21
Ccdc180J3QNE4 Gm15209-201ENSMUST00000117703 400 ntBASIC13.77□□□□□ -0.21
Ccdc180J3QNE4 Gm11889-201ENSMUST00000118402 1079 ntBASIC13.77□□□□□ -0.21
Ccdc180J3QNE4 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC13.77□□□□□ -0.21
Ccdc180J3QNE4 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC13.77□□□□□ -0.21
Ccdc180J3QNE4 Gm22642-201ENSMUST00000175352 252 ntBASIC13.77□□□□□ -0.21
Ccdc180J3QNE4 Gm20702-201ENSMUST00000176181 460 ntBASIC13.77□□□□□ -0.21
Ccdc180J3QNE4 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC13.77□□□□□ -0.21
Ccdc180J3QNE4 Gm4247-201ENSMUST00000211441 1042 ntBASIC13.77□□□□□ -0.21
Ccdc180J3QNE4 AC151904.2-201ENSMUST00000218683 1177 ntBASIC13.77□□□□□ -0.21
Ccdc180J3QNE4 Dnajb5-202ENSMUST00000084662 3302 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc180J3QNE4 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc180J3QNE4 Gbp7-202ENSMUST00000171263 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc180J3QNE4 Rgs8-203ENSMUST00000111812 3625 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Ccdc180J3QNE4 Cdh23-202ENSMUST00000105461 11096 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Ccdc180J3QNE4 Paqr8-204ENSMUST00000189400 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc180J3QNE4 Inpp1-201ENSMUST00000027271 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc180J3QNE4 Olfr130-203ENSMUST00000217390 5959 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Ccdc180J3QNE4 Gm17170-201ENSMUST00000112785 316 ntBASIC13.76□□□□□ -0.21
Ccdc180J3QNE4 Gm13156-201ENSMUST00000118348 321 ntBASIC13.76□□□□□ -0.21
Ccdc180J3QNE4 Gm6142-201ENSMUST00000120290 325 ntBASIC13.76□□□□□ -0.21
Ccdc180J3QNE4 Gm12104-201ENSMUST00000120359 979 ntBASIC13.76□□□□□ -0.21
Ccdc180J3QNE4 Gm25660-201ENSMUST00000158470 104 ntBASIC13.76□□□□□ -0.21
Ccdc180J3QNE4 Gm5611-201ENSMUST00000164523 852 ntBASIC13.76□□□□□ -0.21
Ccdc180J3QNE4 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Ccdc180J3QNE4 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC13.76□□□□□ -0.21
Ccdc180J3QNE4 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms